RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 HYPKQ9NX55 129 aa14.13□□□□□ -0.15
BRCA1-222ENST00000493919 KDM4AO75164 1064 aa14.12□□□□□ -0.15
BRCA1-222ENST00000493919 VAMP4O75379 141 aa14.12□□□□□ -0.15
BRCA1-222ENST00000493919 DDR1Q08345 913 aa14.12□□□□□ -0.15
BRCA1-222ENST00000493919 NFIXQ14938 502 aa14.12□□□□□ -0.15
BRCA1-222ENST00000493919 NFKBIBQ15653 356 aa14.12□□□□□ -0.15
BRCA1-222ENST00000493919 HLFQ16534 295 aa14.12□□□□□ -0.15
BRCA1-222ENST00000493919 PHAXQ9H814 394 aaKnown RBP14.12□□□□□ -0.15
BRCA1-222ENST00000493919 ESPNB1AK53 854 aa14.11□□□□□ -0.15
BRCA1-222ENST00000493919 SETDB1Q15047 1291 aa14.11□□□□□ -0.15
BRCA1-222ENST00000493919 CCDC94Q9BW85 323 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-222ENST00000493919 NUP98P52948 1817 aa14.11□□□□□ -0.15
BRCA1-222ENST00000493919 NPHP1O15259 732 aa14.11□□□□□ -0.15
BRCA1-222ENST00000493919 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
BRCA1-222ENST00000493919 FHDC1Q9C0D6 1143 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-222ENST00000493919 CARMIL3Q8ND23 1372 aa14.11□□□□□ -0.15
BRCA1-222ENST00000493919 ARFGEF2Q9Y6D5 1785 aa14.11□□□□□ -0.15
BRCA1-222ENST00000493919 FAM177BA6PVY3 158 aa14.1□□□□□ -0.15
BRCA1-222ENST00000493919 POLRMTO00411 1230 aaKnown RBP14.1□□□□□ -0.15
BRCA1-222ENST00000493919 SETDB2Q96T68 719 aa14.1□□□□□ -0.15
BRCA1-222ENST00000493919 NIP7Q9Y221 180 aaKnown RBP eCLIP14.1□□□□□ -0.15
BRCA1-222ENST00000493919 AFDNP55196 1824 aaKnown RBP14.1□□□□□ -0.15
BRCA1-222ENST00000493919 ANKRD36CQ5JPF3 1778 aa14.1□□□□□ -0.15
BRCA1-222ENST00000493919 ERVV-1B6SEH8 477 aa14.09□□□□□ -0.15
BRCA1-222ENST00000493919 GPTP24298 496 aa14.09□□□□□ -0.15
BRCA1-222ENST00000493919 CLEC4GQ6UXB4 293 aa14.09□□□□□ -0.15
BRCA1-222ENST00000493919 TRMT2AQ8IZ69 625 aaKnown RBP14.09□□□□□ -0.15
BRCA1-222ENST00000493919 CEP83Q9Y592 693 aa14.09□□□□□ -0.15
BRCA1-222ENST00000493919 TM4SF1P30408 202 aa14.09□□□□□ -0.15
BRCA1-222ENST00000493919 MKL1Q969V6 931 aa14.09□□□□□ -0.15
BRCA1-222ENST00000493919 ATP10DQ9P241 1426 aa14.09□□□□□ -0.15
BRCA1-222ENST00000493919 SERPINB2P05120 415 aa14.08□□□□□ -0.16
BRCA1-222ENST00000493919 GIGYF2Q6Y7W6 1299 aaKnown RBP14.08□□□□□ -0.16
BRCA1-222ENST00000493919 ANKRD13DQ6ZTN6 518 aa14.08□□□□□ -0.16
BRCA1-222ENST00000493919 G2E3Q7L622 706 aa14.08□□□□□ -0.16
BRCA1-222ENST00000493919 RIC3Q7Z5B4 369 aa14.08□□□□□ -0.16
BRCA1-222ENST00000493919 BCL2L13Q9BXK5 485 aa14.08□□□□□ -0.16
BRCA1-222ENST00000493919 C10orf71Q711Q0 1435 aa14.07□□□□□ -0.16
BRCA1-222ENST00000493919 PLBD2Q8NHP8 589 aa14.07□□□□□ -0.16
BRCA1-222ENST00000493919 ZNF428Q96B54 188 aa14.07□□□□□ -0.16
BRCA1-222ENST00000493919 NRXN2Q9P2S2 1712 aa14.07□□□□□ -0.16
BRCA1-222ENST00000493919 DDX58O95786 925 aaKnown RBP14.07□□□□□ -0.16
BRCA1-222ENST00000493919 FLIIQ13045 1269 aa14.07□□□□□ -0.16
BRCA1-222ENST00000493919 FKBP5Q13451 457 aaPredicted RBP14.07□□□□□ -0.16
BRCA1-222ENST00000493919 CCDC24Q8N4L8 307 aa14.07□□□□□ -0.16
BRCA1-222ENST00000493919 CACNA1FO60840 1977 aa14.06□□□□□ -0.16
BRCA1-222ENST00000493919 RGL2O15211 777 aa14.06□□□□□ -0.16
BRCA1-222ENST00000493919 CNBD1Q8NA66 436 aa14.06□□□□□ -0.16
BRCA1-222ENST00000493919 SYT17Q9BSW7 474 aa14.06□□□□□ -0.16
BRCA1-222ENST00000493919 SMC4Q9NTJ3 1288 aa14.06□□□□□ -0.16
BRCA1-222ENST00000493919 UBN2Q6ZU65 1347 aa14.06□□□□□ -0.16
BRCA1-222ENST00000493919 HDAC1Q13547 482 aaPredicted RBP14.05□□□□□ -0.16
BRCA1-222ENST00000493919 MPNDQ8N594 471 aa14.05□□□□□ -0.16
BRCA1-222ENST00000493919 NLGN2Q8NFZ4 835 aa14.05□□□□□ -0.16
BRCA1-222ENST00000493919 SGSM3Q96HU1 749 aa14.05□□□□□ -0.16
BRCA1-222ENST00000493919 MYCBPQ99417 103 aaPredicted RBP14.05□□□□□ -0.16
BRCA1-222ENST00000493919 RAD21O60216 631 aa14.05□□□□□ -0.16
BRCA1-222ENST00000493919 SPTY2D1Q68D10 685 aaPredicted RBP14.05□□□□□ -0.16
BRCA1-222ENST00000493919 MAP3K2Q9Y2U5 619 aa14.05□□□□□ -0.16
BRCA1-222ENST00000493919 KIF13BQ9NQT8 1826 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 PI4KAP2A4QPH2 592 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 ATP5J2-PTCD1G3V325 749 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 ST5P78524 1137 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 MTA1Q13330 715 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 PRR5LQ6MZQ0 368 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 PI4KAP1Q8N8J0 262 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 SSH1Q8WYL5 1049 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 MYD88Q99836 296 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 WWC3Q9ULE0 1092 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 ADCY9O60503 1353 aa14.04□□□□□ -0.16
BRCA1-222ENST00000493919 N4BP2Q86UW6 1770 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-222ENST00000493919 CT47B1P0C2W7 299 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-222ENST00000493919 TCIRG1Q13488 830 aa14.03□□□□□ -0.16
BRCA1-222ENST00000493919 KIAA1211Q6ZU35 1233 aa14.03□□□□□ -0.16
BRCA1-222ENST00000493919 ZNF34Q8IZ26 560 aa14.03□□□□□ -0.16
BRCA1-222ENST00000493919 CD2APQ9Y5K6 639 aa14.03□□□□□ -0.16
BRCA1-222ENST00000493919 KSR2Q6VAB6 950 aa14.03□□□□□ -0.16
BRCA1-222ENST00000493919 ANKRD23Q86SG2 305 aa14.03□□□□□ -0.16
BRCA1-222ENST00000493919 NUTM1Q86Y26 1132 aa14.03□□□□□ -0.16
BRCA1-222ENST00000493919 TSPAN18Q96SJ8 248 aa14.03□□□□□ -0.16
BRCA1-222ENST00000493919 LOC102724159A0A0B4J2E5 919 aa14.02□□□□□ -0.16
BRCA1-222ENST00000493919 PRR29P0C7W0 189 aa14.02□□□□□ -0.16
BRCA1-222ENST00000493919 PWP2Q15269 919 aaKnown RBP14.02□□□□□ -0.16
BRCA1-222ENST00000493919 PARP10Q53GL7 1025 aa14.02□□□□□ -0.16
BRCA1-222ENST00000493919 SUSD4Q5VX71 490 aa14.02□□□□□ -0.16
BRCA1-222ENST00000493919 TPTE2Q6XPS3 522 aa14.02□□□□□ -0.16
BRCA1-222ENST00000493919 MRPL50Q8N5N7 158 aaKnown RBP14.02□□□□□ -0.16
BRCA1-222ENST00000493919 RNF217Q8TC41 542 aa14.02□□□□□ -0.16
BRCA1-222ENST00000493919 NYXQ9GZU5 481 aa14.02□□□□□ -0.16
BRCA1-222ENST00000493919 PXDNLA1KZ92 1463 aa14.02□□□□□ -0.16
BRCA1-222ENST00000493919 ANKRD31Q8N7Z5 1873 aa14.02□□□□□ -0.16
BRCA1-222ENST00000493919 KIAA1551Q9HCM1 1747 aa14.02□□□□□ -0.17
BRCA1-222ENST00000493919 ABCC12Q96J65 1359 aa14.02□□□□□ -0.17
BRCA1-222ENST00000493919 CCDC172P0C7W6 258 aa14.02□□□□□ -0.17
BRCA1-222ENST00000493919 NEXNQ0ZGT2 675 aa14.02□□□□□ -0.17
BRCA1-222ENST00000493919 ALDH1L2Q3SY69 923 aa14.02□□□□□ -0.17
BRCA1-222ENST00000493919 PPP1R42Q7Z4L9 355 aa14.02□□□□□ -0.17
BRCA1-222ENST00000493919 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
BRCA1-222ENST00000493919 CGNQ9P2M7 1197 aaKnown RBP14.02□□□□□ -0.17
BRCA1-222ENST00000493919 MRVI1Q9Y6F6 885 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms