RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 ANKRD45Q5TZF3 282 aa27.34■■□□□ 1.97
PSPC1-204ENST00000492741 PDGFDQ9GZP0 370 aaPredicted RBP27.34■■□□□ 1.97
PSPC1-204ENST00000492741 PA2G4Q9UQ80 394 aaKnown RBP27.34■■□□□ 1.97
PSPC1-204ENST00000492741 IFIT5Q13325 482 aaKnown RBP27.33■■□□□ 1.97
PSPC1-204ENST00000492741 FAM161AQ3B820 660 aa27.33■■□□□ 1.97
PSPC1-204ENST00000492741 NLRP3Q96P20 1036 aa27.33■■□□□ 1.97
PSPC1-204ENST00000492741 CCDC152Q4G0S7 254 aa27.33■■□□□ 1.96
PSPC1-204ENST00000492741 HSP90AB4PQ58FF6 505 aa27.33■■□□□ 1.96
PSPC1-204ENST00000492741 TAF7LQ5H9L4 462 aa27.33■■□□□ 1.96
PSPC1-204ENST00000492741 PRR5LQ6MZQ0 368 aa27.33■■□□□ 1.96
PSPC1-204ENST00000492741 KLHDC4Q8TBB5 520 aa27.33■■□□□ 1.96
PSPC1-204ENST00000492741 BCL11AQ9H165 835 aa27.33■■□□□ 1.96
PSPC1-204ENST00000492741 ABCC12Q96J65 1359 aa27.32■■□□□ 1.96
PSPC1-204ENST00000492741 SLC16A10Q8TF71 515 aa27.32■■□□□ 1.96
PSPC1-204ENST00000492741 SIL1Q9H173 461 aa27.32■■□□□ 1.96
PSPC1-204ENST00000492741 GREM2Q9H772 168 aa27.32■■□□□ 1.96
PSPC1-204ENST00000492741 PDZRN3Q9UPQ7 1066 aa27.32■■□□□ 1.96
PSPC1-204ENST00000492741 G3BP1Q13283 466 aaKnown RBP eCLIP27.31■■□□□ 1.96
PSPC1-204ENST00000492741 R3HDM1Q15032 1099 aaKnown RBP27.31■■□□□ 1.96
PSPC1-204ENST00000492741 ANKRD18BA2A2Z9 1011 aa27.3■■□□□ 1.96
PSPC1-204ENST00000492741 ITGA6P23229 1130 aa27.3■■□□□ 1.96
PSPC1-204ENST00000492741 RFX5P48382 616 aaPredicted RBP27.3■■□□□ 1.96
PSPC1-204ENST00000492741 PTPN12Q05209 780 aaKnown RBP27.3■■□□□ 1.96
PSPC1-204ENST00000492741 COPRSQ9NQ92 184 aa27.3■■□□□ 1.96
PSPC1-204ENST00000492741 NOP58Q9Y2X3 529 aaKnown RBP27.3■■□□□ 1.96
PSPC1-204ENST00000492741 RAB11FIP3O75154 756 aa27.29■■□□□ 1.96
PSPC1-204ENST00000492741 NUCB1Q02818 461 aa27.29■■□□□ 1.96
PSPC1-204ENST00000492741 MYH3P11055 1940 aa27.28■■□□□ 1.96
PSPC1-204ENST00000492741 ZNF594Q96JF6 807 aaPredicted RBP27.28■■□□□ 1.96
PSPC1-204ENST00000492741 DDX60Q8IY21 1712 aaKnown RBP27.28■■□□□ 1.96
PSPC1-204ENST00000492741 CHD1LQ86WJ1 897 aa27.27■■□□□ 1.96
PSPC1-204ENST00000492741 LRRCC1Q9C099 1032 aa27.27■■□□□ 1.96
PSPC1-204ENST00000492741 SF3B3Q15393 1217 aaKnown RBP27.27■■□□□ 1.96
PSPC1-204ENST00000492741 C3orf67Q6ZVT6 689 aa27.27■■□□□ 1.96
PSPC1-204ENST00000492741 LNPKQ9C0E8 428 aa27.27■■□□□ 1.96
PSPC1-204ENST00000492741 ERC1Q8IUD2 1116 aa27.26■■□□□ 1.95
PSPC1-204ENST00000492741 KIF1BPQ96EK5 621 aa27.25■■□□□ 1.95
PSPC1-204ENST00000492741 LAMB2P55268 1798 aa27.25■■□□□ 1.95
PSPC1-204ENST00000492741 SMARCA5O60264 1052 aaPredicted RBP27.24■■□□□ 1.95
PSPC1-204ENST00000492741 SEC31BQ9NQW1 1179 aa27.24■■□□□ 1.95
PSPC1-204ENST00000492741 SKAP1Q86WV1 359 aa27.24■■□□□ 1.95
PSPC1-204ENST00000492741 RHPN1Q8TCX5 695 aa27.24■■□□□ 1.95
PSPC1-204ENST00000492741 PSDA5PKW4 1024 aaPredicted RBP27.23■■□□□ 1.95
PSPC1-204ENST00000492741 ZBTB7AO95365 584 aa27.23■■□□□ 1.95
PSPC1-204ENST00000492741 RGS3P49796 1198 aa27.22■■□□□ 1.95
PSPC1-204ENST00000492741 LDHAL6AQ6ZMR3 332 aa27.22■■□□□ 1.95
PSPC1-204ENST00000492741 CDC5LQ99459 802 aaKnown RBP27.22■■□□□ 1.95
PSPC1-204ENST00000492741 MPHOSPH8Q99549 860 aa27.21■■□□□ 1.95
PSPC1-204ENST00000492741 RTL9Q8NET4 1388 aa27.21■■□□□ 1.95
PSPC1-204ENST00000492741 EYA2O00167 538 aa27.21■■□□□ 1.95
PSPC1-204ENST00000492741 IGHMBP2P38935 993 aaKnown RBP27.21■■□□□ 1.95
PSPC1-204ENST00000492741 DDX46Q7L014 1031 aaKnown RBP27.21■■□□□ 1.95
PSPC1-204ENST00000492741 BRIP1Q9BX63 1249 aa27.21■■□□□ 1.95
PSPC1-204ENST00000492741 IL1RAPL2Q9NP60 686 aa27.21■■□□□ 1.95
PSPC1-204ENST00000492741 CNNM1Q9NRU3 951 aa27.21■■□□□ 1.95
PSPC1-204ENST00000492741 LRRC24Q50LG9 513 aa27.2■■□□□ 1.94
PSPC1-204ENST00000492741 RPGRQ92834 1020 aaKnown RBP27.2■■□□□ 1.94
PSPC1-204ENST00000492741 PUS3Q9BZE2 481 aaKnown RBP27.2■■□□□ 1.94
PSPC1-204ENST00000492741 IL15P40933 162 aaPredicted RBP27.19■■□□□ 1.94
PSPC1-204ENST00000492741 MTFR1LQ9H019 292 aa27.19■■□□□ 1.94
PSPC1-204ENST00000492741 FBXO3Q9UK99 471 aa27.19■■□□□ 1.94
PSPC1-204ENST00000492741 ATF5Q9Y2D1 282 aaPredicted RBP27.19■■□□□ 1.94
PSPC1-204ENST00000492741 RIC1Q4ADV7 1423 aa27.19■■□□□ 1.94
PSPC1-204ENST00000492741 CIAO1O76071 339 aa27.19■■□□□ 1.94
PSPC1-204ENST00000492741 SASH1O94885 1247 aa27.19■■□□□ 1.94
PSPC1-204ENST00000492741 ANKRD18AQ8IVF6 992 aa27.19■■□□□ 1.94
PSPC1-204ENST00000492741 PDE6BP35913 854 aa27.18■■□□□ 1.94
PSPC1-204ENST00000492741 ATG9AQ7Z3C6 839 aa27.17■■□□□ 1.94
PSPC1-204ENST00000492741 CLASRPQ8N2M8 674 aaKnown RBP27.17■■□□□ 1.94
PSPC1-204ENST00000492741 POLD1P28340 1107 aa27.16■■□□□ 1.94
PSPC1-204ENST00000492741 NRXN2Q9P2S2 1712 aa27.16■■□□□ 1.94
PSPC1-204ENST00000492741 TFCP2Q12800 502 aa27.16■■□□□ 1.94
PSPC1-204ENST00000492741 C16orf71Q8IYS4 520 aaPredicted RBP27.16■■□□□ 1.94
PSPC1-204ENST00000492741 RBM17Q96I25 401 aaKnown RBP27.16■■□□□ 1.94
PSPC1-204ENST00000492741 CEP126Q9P2H0 1117 aa27.16■■□□□ 1.94
PSPC1-204ENST00000492741 TNRC6CQ9HCJ0 1690 aaKnown RBP27.15■■□□□ 1.94
PSPC1-204ENST00000492741 PDE4AP27815 886 aa27.15■■□□□ 1.94
PSPC1-204ENST00000492741 CRY2Q49AN0 593 aa27.15■■□□□ 1.94
PSPC1-204ENST00000492741 RPS8P62241 208 aaKnown RBP27.14■■□□□ 1.94
PSPC1-204ENST00000492741 METTL24Q5JXM2 366 aa27.14■■□□□ 1.94
PSPC1-204ENST00000492741 CELF1Q92879 486 aaKnown RBP27.14■■□□□ 1.94
PSPC1-204ENST00000492741 RIPOR2Q9Y4F9 1068 aa27.13■■□□□ 1.93
PSPC1-204ENST00000492741 KLRG2A4D1S0 409 aaPredicted RBP27.13■■□□□ 1.93
PSPC1-204ENST00000492741 CASZ1Q86V15 1759 aa27.11■■□□□ 1.93
PSPC1-204ENST00000492741 IFIT2P09913 472 aaKnown RBP27.11■■□□□ 1.93
PSPC1-204ENST00000492741 GRAPQ13588 217 aa27.11■■□□□ 1.93
PSPC1-204ENST00000492741 AACSQ86V21 672 aa27.11■■□□□ 1.93
PSPC1-204ENST00000492741 PELP1Q8IZL8 1130 aaKnown RBP27.11■■□□□ 1.93
PSPC1-204ENST00000492741 GRAPLQ8TC17 118 aaPredicted RBP27.11■■□□□ 1.93
PSPC1-204ENST00000492741 BSDC1Q9NW68 430 aaPredicted RBP27.11■■□□□ 1.93
PSPC1-204ENST00000492741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.1■■□□□ 1.93
PSPC1-204ENST00000492741 MROH5Q6ZUA9 1318 aa27.1■■□□□ 1.93
PSPC1-204ENST00000492741 H0YIN7 160 aa27.09■■□□□ 1.93
PSPC1-204ENST00000492741 NPR1P16066 1061 aa27.09■■□□□ 1.93
PSPC1-204ENST00000492741 C2CD5Q86YS7 1000 aa27.09■■□□□ 1.93
PSPC1-204ENST00000492741 OTUD7AQ8TE49 926 aaPredicted RBP27.09■■□□□ 1.93
PSPC1-204ENST00000492741 AKAP2Q9Y2D5 859 aa27.09■■□□□ 1.93
PSPC1-204ENST00000492741 SRGNP10124 158 aa27.08■■□□□ 1.93
PSPC1-204ENST00000492741 HOXA10P31260 410 aaPredicted RBP27.08■■□□□ 1.93
PSPC1-204ENST00000492741 TNNI3KQ59H18 835 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms