RNA–Protein interactions for RNA: ENST00000491274.5

SDHB-208, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-208ENST00000491274 GIGYF2Q6Y7W6 1299 aaKnown RBP8.56□□□□□ -1.04
SDHB-208ENST00000491274 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
SDHB-208ENST00000491274 PPP1R42Q7Z4L9 355 aa8.56□□□□□ -1.04
SDHB-208ENST00000491274 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
SDHB-208ENST00000491274 PLPP6Q8IY26 295 aa8.56□□□□□ -1.04
SDHB-208ENST00000491274 TTLL6Q8N841 843 aa8.56□□□□□ -1.04
SDHB-208ENST00000491274 MYH16Q9H6N6 1097 aa8.56□□□□□ -1.04
SDHB-208ENST00000491274 TAF1LQ8IZX4 1826 aa8.56□□□□□ -1.04
SDHB-208ENST00000491274 C10orf71Q711Q0 1435 aa8.55□□□□□ -1.04
SDHB-208ENST00000491274 DDX58O95786 925 aaKnown RBP8.55□□□□□ -1.04
SDHB-208ENST00000491274 TCIRG1Q13488 830 aa8.55□□□□□ -1.04
SDHB-208ENST00000491274 PARP10Q53GL7 1025 aa8.55□□□□□ -1.04
SDHB-208ENST00000491274 SUSD4Q5VX71 490 aa8.55□□□□□ -1.04
SDHB-208ENST00000491274 ASTLQ6HA08 431 aaPredicted RBP8.55□□□□□ -1.04
SDHB-208ENST00000491274 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
SDHB-208ENST00000491274 TSPYL6Q8N831 410 aa8.55□□□□□ -1.04
SDHB-208ENST00000491274 PLBD2Q8NHP8 589 aa8.55□□□□□ -1.04
SDHB-208ENST00000491274 CNKSR1Q969H4 720 aa8.55□□□□□ -1.04
SDHB-208ENST00000491274 UTP14AQ9BVJ6 771 aaKnown RBP8.55□□□□□ -1.04
SDHB-208ENST00000491274 UBR3Q6ZT12 1888 aa8.55□□□□□ -1.04
SDHB-208ENST00000491274 CICQ96RK0 1608 aaPredicted RBP8.54□□□□□ -1.04
SDHB-208ENST00000491274 TJP1Q07157 1748 aa8.54□□□□□ -1.04
SDHB-208ENST00000491274 QSER1Q2KHR3 1735 aa8.54□□□□□ -1.04
SDHB-208ENST00000491274 PXDNLA1KZ92 1463 aa8.54□□□□□ -1.04
SDHB-208ENST00000491274 OSBPP22059 807 aa8.54□□□□□ -1.04
SDHB-208ENST00000491274 ZNF34Q8IZ26 560 aa8.54□□□□□ -1.04
SDHB-208ENST00000491274 ZNF428Q96B54 188 aa8.54□□□□□ -1.04
SDHB-208ENST00000491274 MASTLQ96GX5 879 aa8.54□□□□□ -1.04
SDHB-208ENST00000491274 DDRGK1Q96HY6 314 aa8.54□□□□□ -1.04
SDHB-208ENST00000491274 BMP2KQ9NSY1 1161 aaPredicted RBP8.54□□□□□ -1.04
SDHB-208ENST00000491274 TRMT112Q9UI30 125 aaKnown RBP8.54□□□□□ -1.04
SDHB-208ENST00000491274 MYH14Q7Z406 1995 aaKnown RBP8.53□□□□□ -1.04
SDHB-208ENST00000491274 TUBGCP6Q96RT7 1819 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 ATP5J2-PTCD1G3V325 749 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 APBB1O00213 710 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 SRGNP10124 158 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 NPR1P16066 1061 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 TIE1P35590 1138 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 EXOSC9Q06265 439 aaKnown RBP8.53□□□□□ -1.04
SDHB-208ENST00000491274 ERFEQ4G0M1 354 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 STYK1Q6J9G0 422 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 LRP10Q7Z4F1 713 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 TMC2Q8TDI7 906 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 RPGRQ92834 1020 aaKnown RBP8.53□□□□□ -1.04
SDHB-208ENST00000491274 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 TMX4Q9H1E5 349 aaPredicted RBP8.53□□□□□ -1.04
SDHB-208ENST00000491274 PHAXQ9H814 394 aaKnown RBP8.53□□□□□ -1.04
SDHB-208ENST00000491274 FANCIQ9NVI1 1328 aa8.53□□□□□ -1.04
SDHB-208ENST00000491274 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
SDHB-208ENST00000491274 ATMINO43313 823 aaPredicted RBP8.52□□□□□ -1.05
SDHB-208ENST00000491274 C21orf2O43822 256 aa8.52□□□□□ -1.05
SDHB-208ENST00000491274 ALDH1B1P30837 517 aa8.52□□□□□ -1.05
SDHB-208ENST00000491274 NLRP10Q86W26 655 aa8.52□□□□□ -1.05
SDHB-208ENST00000491274 ZNF526Q8TF50 670 aaPredicted RBP8.52□□□□□ -1.05
SDHB-208ENST00000491274 UBN2Q6ZU65 1347 aa8.52□□□□□ -1.05
SDHB-208ENST00000491274 UBR2Q8IWV8 1755 aa8.51□□□□□ -1.05
SDHB-208ENST00000491274 E9PSI1 815 aa8.51□□□□□ -1.05
SDHB-208ENST00000491274 VAMP4O75379 141 aa8.51□□□□□ -1.05
SDHB-208ENST00000491274 HCLS1P14317 486 aaPredicted RBP8.51□□□□□ -1.05
SDHB-208ENST00000491274 NEXNQ0ZGT2 675 aa8.51□□□□□ -1.05
SDHB-208ENST00000491274 RTL5Q5HYW3 569 aaPredicted RBP8.51□□□□□ -1.05
SDHB-208ENST00000491274 SOGA3Q5TF21 947 aa8.51□□□□□ -1.05
SDHB-208ENST00000491274 C9orf131Q5VYM1 1079 aa8.51□□□□□ -1.05
SDHB-208ENST00000491274 PRPF40BQ6NWY9 871 aaKnown RBP8.51□□□□□ -1.05
SDHB-208ENST00000491274 PDCD7Q8N8D1 485 aaKnown RBP8.51□□□□□ -1.05
SDHB-208ENST00000491274 ZNF784Q8NCA9 323 aaPredicted RBP8.51□□□□□ -1.05
SDHB-208ENST00000491274 RBM17Q96I25 401 aaKnown RBP8.51□□□□□ -1.05
SDHB-208ENST00000491274 MYD88Q99836 296 aa8.51□□□□□ -1.05
SDHB-208ENST00000491274 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
SDHB-208ENST00000491274 C4AP0C0L4 1744 aa8.51□□□□□ -1.05
SDHB-208ENST00000491274 SH3TC1Q8TE82 1336 aa8.51□□□□□ -1.05
SDHB-208ENST00000491274 SIPA1L3O60292 1781 aaPredicted RBP8.5□□□□□ -1.05
SDHB-208ENST00000491274 PI4KAP2A4QPH2 592 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 KIF3CO14782 793 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 NTSR2O95665 410 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 MS4A1P11836 297 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 HSP90B1P14625 803 aaKnown RBP8.5□□□□□ -1.05
SDHB-208ENST00000491274 MAP3K9P80192 1104 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 FKBP5Q13451 457 aaPredicted RBP8.5□□□□□ -1.05
SDHB-208ENST00000491274 KSR2Q6VAB6 950 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 PI4KAP1Q8N8J0 262 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 DDX12PQ92771 950 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 CLUAP1Q96AJ1 413 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 FAM89AQ96GI7 184 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 RNF181Q9P0P0 153 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 ATP10DQ9P241 1426 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 MAP3K2Q9Y2U5 619 aa8.5□□□□□ -1.05
SDHB-208ENST00000491274 KLRG2A4D1S0 409 aaPredicted RBP8.49□□□□□ -1.05
SDHB-208ENST00000491274 TRIM28Q13263 835 aaKnown RBP8.49□□□□□ -1.05
SDHB-208ENST00000491274 SLC10A5Q5PT55 438 aa8.49□□□□□ -1.05
SDHB-208ENST00000491274 DDX46Q7L014 1031 aaKnown RBP8.49□□□□□ -1.05
SDHB-208ENST00000491274 SYNE4Q8N205 404 aa8.49□□□□□ -1.05
SDHB-208ENST00000491274 SLC39A7Q92504 469 aa8.49□□□□□ -1.05
SDHB-208ENST00000491274 ISCA1Q9BUE6 129 aa8.49□□□□□ -1.05
SDHB-208ENST00000491274 METTL22Q9BUU2 404 aaPredicted RBP8.49□□□□□ -1.05
SDHB-208ENST00000491274 CWC25Q9NXE8 425 aaPredicted RBP8.49□□□□□ -1.05
SDHB-208ENST00000491274 RNF123Q5XPI4 1314 aa8.49□□□□□ -1.05
SDHB-208ENST00000491274 POTEB2H3BUK9 544 aa8.48□□□□□ -1.05
SDHB-208ENST00000491274 IRS4O14654 1257 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms