RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 LAMB2P55268 1798 aa18.43■□□□□ 0.54
EXOSC3-207ENST00000490516 TBC1D8O95759 1140 aa18.43■□□□□ 0.54
EXOSC3-207ENST00000490516 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
EXOSC3-207ENST00000490516 TAF1P21675 1872 aa18.42■□□□□ 0.54
EXOSC3-207ENST00000490516 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-207ENST00000490516 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
EXOSC3-207ENST00000490516 RBM26Q5T8P6 1007 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-207ENST00000490516 RASAL3Q86YV0 1011 aa18.42■□□□□ 0.54
EXOSC3-207ENST00000490516 DCPSQ96C86 337 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-207ENST00000490516 ERVV-1B6SEH8 477 aa18.41■□□□□ 0.54
EXOSC3-207ENST00000490516 NTSR2O95665 410 aa18.41■□□□□ 0.54
EXOSC3-207ENST00000490516 FBXO46Q6PJ61 603 aaPredicted RBP18.41■□□□□ 0.54
EXOSC3-207ENST00000490516 REM2Q8IYK8 340 aaPredicted RBP18.41■□□□□ 0.54
EXOSC3-207ENST00000490516 MPNDQ8N594 471 aa18.41■□□□□ 0.54
EXOSC3-207ENST00000490516 ABCC4O15439 1325 aa18.41■□□□□ 0.54
EXOSC3-207ENST00000490516 MAP3K15Q6ZN16 1313 aa18.41■□□□□ 0.54
EXOSC3-207ENST00000490516 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
EXOSC3-207ENST00000490516 TTLL7Q6ZT98 887 aa18.4■□□□□ 0.54
EXOSC3-207ENST00000490516 DPF2Q92785 391 aa18.4■□□□□ 0.54
EXOSC3-207ENST00000490516 PHACTR3Q96KR7 559 aa18.4■□□□□ 0.54
EXOSC3-207ENST00000490516 DUOX1Q9NRD9 1551 aa18.39■□□□□ 0.53
EXOSC3-207ENST00000490516 PSMD14O00487 310 aa18.39■□□□□ 0.53
EXOSC3-207ENST00000490516 NLRP3Q96P20 1036 aa18.39■□□□□ 0.53
EXOSC3-207ENST00000490516 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.53
EXOSC3-207ENST00000490516 PAPPA2Q9BXP8 1791 aa18.39■□□□□ 0.53
EXOSC3-207ENST00000490516 ANKRD36CQ5JPF3 1778 aa18.38■□□□□ 0.53
EXOSC3-207ENST00000490516 MCM10Q7L590 875 aa18.38■□□□□ 0.53
EXOSC3-207ENST00000490516 SP8Q8IXZ3 490 aa18.38■□□□□ 0.53
EXOSC3-207ENST00000490516 POTEFA5A3E0 1075 aa18.37■□□□□ 0.53
EXOSC3-207ENST00000490516 GPR25O00155 361 aa18.37■□□□□ 0.53
EXOSC3-207ENST00000490516 KIF6Q6ZMV9 814 aa18.37■□□□□ 0.53
EXOSC3-207ENST00000490516 ZNF34Q8IZ26 560 aa18.37■□□□□ 0.53
EXOSC3-207ENST00000490516 CDCA5Q96FF9 252 aa18.37■□□□□ 0.53
EXOSC3-207ENST00000490516 ASTN2O75129 1339 aaPredicted RBP18.37■□□□□ 0.53
EXOSC3-207ENST00000490516 RBBP6Q7Z6E9 1792 aaKnown RBP18.36■□□□□ 0.53
EXOSC3-207ENST00000490516 SULF1Q8IWU6 871 aa18.36■□□□□ 0.53
EXOSC3-207ENST00000490516 GGA3Q9NZ52 723 aa18.36■□□□□ 0.53
EXOSC3-207ENST00000490516 HSPA5P11021 654 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-207ENST00000490516 DBNDD1Q9H9R9 158 aa18.35■□□□□ 0.53
EXOSC3-207ENST00000490516 RRP7AQ9Y3A4 280 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-207ENST00000490516 BBOX1O75936 387 aa18.34■□□□□ 0.53
EXOSC3-207ENST00000490516 PRKAR2BP31323 418 aa18.34■□□□□ 0.53
EXOSC3-207ENST00000490516 DCTN1Q14203 1278 aa18.34■□□□□ 0.53
EXOSC3-207ENST00000490516 KIF4BQ2VIQ3 1234 aa18.34■□□□□ 0.53
EXOSC3-207ENST00000490516 PPP1R42Q7Z4L9 355 aa18.34■□□□□ 0.53
EXOSC3-207ENST00000490516 KCNQ5Q9NR82 932 aa18.34■□□□□ 0.53
EXOSC3-207ENST00000490516 LRRC37AA6NMS7 1700 aa18.34■□□□□ 0.53
EXOSC3-207ENST00000490516 HTTP42858 3142 aa18.34■□□□□ 0.53
EXOSC3-207ENST00000490516 SZT2Q5T011 3432 aa18.33■□□□□ 0.52
EXOSC3-207ENST00000490516 DLL1O00548 723 aa18.33■□□□□ 0.52
EXOSC3-207ENST00000490516 MYL6BP14649 208 aa18.33■□□□□ 0.52
EXOSC3-207ENST00000490516 MOB2Q70IA6 237 aa18.33■□□□□ 0.52
EXOSC3-207ENST00000490516 MIS18AQ9NYP9 233 aa18.33■□□□□ 0.52
EXOSC3-207ENST00000490516 COLQQ9Y215 455 aaPredicted RBP18.33■□□□□ 0.52
EXOSC3-207ENST00000490516 DDX60Q8IY21 1712 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-207ENST00000490516 SCN9AQ15858 1988 aa18.32■□□□□ 0.52
EXOSC3-207ENST00000490516 CENPFP49454 3210 aa18.32■□□□□ 0.52
EXOSC3-207ENST00000490516 SLC10A5Q5PT55 438 aa18.32■□□□□ 0.52
EXOSC3-207ENST00000490516 CC2D1BQ5T0F9 858 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-207ENST00000490516 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-207ENST00000490516 R3HDMLQ9H3Y0 253 aa18.32■□□□□ 0.52
EXOSC3-207ENST00000490516 KIAA0100Q14667 2235 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-207ENST00000490516 RTL9Q8NET4 1388 aa18.31■□□□□ 0.52
EXOSC3-207ENST00000490516 FKTNO75072 461 aa18.31■□□□□ 0.52
EXOSC3-207ENST00000490516 RPS12P25398 132 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-207ENST00000490516 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-207ENST00000490516 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-207ENST00000490516 RIMBP2O15034 1052 aa18.3■□□□□ 0.52
EXOSC3-207ENST00000490516 TM4SF4P48230 202 aa18.3■□□□□ 0.52
EXOSC3-207ENST00000490516 EIF4G2P78344 907 aaKnown RBP eCLIP18.3■□□□□ 0.52
EXOSC3-207ENST00000490516 WASHC4Q2M389 1173 aa18.3■□□□□ 0.52
EXOSC3-207ENST00000490516 UTP14AQ9BVJ6 771 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-207ENST00000490516 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
EXOSC3-207ENST00000490516 TRIOBPQ9H2D6 2365 aa18.29■□□□□ 0.52
EXOSC3-207ENST00000490516 UBE2Q2LH0YL09 131 aa18.29■□□□□ 0.52
EXOSC3-207ENST00000490516 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
EXOSC3-207ENST00000490516 FKBP1BP68106 108 aa18.29■□□□□ 0.52
EXOSC3-207ENST00000490516 MKRN3Q13064 507 aaKnown RBP18.29■□□□□ 0.52
EXOSC3-207ENST00000490516 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
EXOSC3-207ENST00000490516 ANGEL2Q5VTE6 544 aaKnown RBP18.29■□□□□ 0.52
EXOSC3-207ENST00000490516 BRCA2P51587 3418 aa18.29■□□□□ 0.52
EXOSC3-207ENST00000490516 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
EXOSC3-207ENST00000490516 ECE2O60344 883 aa18.28■□□□□ 0.52
EXOSC3-207ENST00000490516 GRAPQ13588 217 aa18.28■□□□□ 0.52
EXOSC3-207ENST00000490516 DOK7Q18PE1 504 aa18.28■□□□□ 0.52
EXOSC3-207ENST00000490516 DDX46Q7L014 1031 aaKnown RBP18.28■□□□□ 0.52
EXOSC3-207ENST00000490516 GRAPLQ8TC17 118 aaPredicted RBP18.28■□□□□ 0.52
EXOSC3-207ENST00000490516 SCAF8Q9UPN6 1271 aaKnown RBP18.28■□□□□ 0.52
EXOSC3-207ENST00000490516 EN2P19622 333 aaPredicted RBP18.27■□□□□ 0.52
EXOSC3-207ENST00000490516 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
EXOSC3-207ENST00000490516 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.52
EXOSC3-207ENST00000490516 SCARF1Q14162 830 aa18.26■□□□□ 0.51
EXOSC3-207ENST00000490516 TRIM17Q9Y577 477 aa18.26■□□□□ 0.51
EXOSC3-207ENST00000490516 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
EXOSC3-207ENST00000490516 PRAMEF18Q5VWM3 479 aa18.25■□□□□ 0.51
EXOSC3-207ENST00000490516 POLLQ9UGP5 575 aa18.25■□□□□ 0.51
EXOSC3-207ENST00000490516 NSFL1CQ9UNZ2 370 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-207ENST00000490516 CEP290O15078 2479 aa18.25■□□□□ 0.51
EXOSC3-207ENST00000490516 C6orf229H3BNL8 230 aa18.24■□□□□ 0.51
EXOSC3-207ENST00000490516 OTOP1Q7RTM1 612 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms