RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 LRP5O75197 1615 aa10.44□□□□□ -0.74
VTI1A-207ENST00000489357 PALLDQ8WX93 1383 aa10.44□□□□□ -0.74
VTI1A-207ENST00000489357 CABP4P57796 275 aa10.44□□□□□ -0.74
VTI1A-207ENST00000489357 NBPF14Q5TI25 921 aa10.44□□□□□ -0.74
VTI1A-207ENST00000489357 CASC1Q6TDU7 716 aa10.44□□□□□ -0.74
VTI1A-207ENST00000489357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.44□□□□□ -0.74
VTI1A-207ENST00000489357 MEIS3Q99687 375 aa10.44□□□□□ -0.74
VTI1A-207ENST00000489357 DBF4Q9UBU7 674 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-207ENST00000489357 TUBGCP6Q96RT7 1819 aa10.44□□□□□ -0.74
VTI1A-207ENST00000489357 COL5A3P25940 1745 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-207ENST00000489357 AOX1Q06278 1338 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 BTBD11A6QL63 1104 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 OSBPP22059 807 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 FOSBP53539 338 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 PLEKHM2Q8IWE5 1019 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 SNX21Q969T3 373 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 EPAS1Q99814 870 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 SRCIN1Q9C0H9 1055 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 MIS18AQ9NYP9 233 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 PCDHGA10Q9Y5H3 936 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 C5P01031 1676 aa10.43□□□□□ -0.74
VTI1A-207ENST00000489357 UBR3Q6ZT12 1888 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 COL24A1Q17RW2 1714 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 LOC102724428A0A0B4J2F2 783 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 EPB41L2O43491 1005 aaKnown RBP10.42□□□□□ -0.74
VTI1A-207ENST00000489357 SIK1P57059 783 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 ATP8B2P98198 1209 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 TTC22Q5TAA0 569 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 G2E3Q7L622 706 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 KCPQ6ZWJ8 1503 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 CASZ1Q86V15 1759 aa10.42□□□□□ -0.74
VTI1A-207ENST00000489357 RAB11FIP3O75154 756 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 ALDH1L1O75891 902 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 EMP3P54852 163 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 KCNQ4P56696 695 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 ITPK1Q13572 414 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 SLC15A2Q16348 729 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 HSP90AB4PQ58FF6 505 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 SLC4A10Q6U841 1118 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 MARVELD3Q96A59 401 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 HYPKQ9NX55 129 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 CCNL1Q9UK58 526 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-207ENST00000489357 TJP1Q07157 1748 aa10.41□□□□□ -0.74
VTI1A-207ENST00000489357 UBTFL1P0CB47 393 aaPredicted RBP10.4□□□□□ -0.74
VTI1A-207ENST00000489357 MFAP1P55081 439 aaKnown RBP10.4□□□□□ -0.74
VTI1A-207ENST00000489357 SLC39A6Q13433 755 aa10.4□□□□□ -0.74
VTI1A-207ENST00000489357 ZNF827Q17R98 1081 aa10.4□□□□□ -0.74
VTI1A-207ENST00000489357 RC3H1Q5TC82 1133 aaKnown RBP10.4□□□□□ -0.74
VTI1A-207ENST00000489357 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.74
VTI1A-207ENST00000489357 ZNF790Q6PG37 636 aa10.4□□□□□ -0.74
VTI1A-207ENST00000489357 TBC1D9Q6ZT07 1266 aa10.4□□□□□ -0.74
VTI1A-207ENST00000489357 C4BP0C0L5 1744 aa10.4□□□□□ -0.74
VTI1A-207ENST00000489357 GIGYF1O75420 1035 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-207ENST00000489357 REC8O95072 547 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 DDX58O95786 925 aaKnown RBP10.39□□□□□ -0.75
VTI1A-207ENST00000489357 MTX1Q13505 466 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 PPP4R3BQ5MIZ7 849 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 RBM26Q5T8P6 1007 aaKnown RBP10.39□□□□□ -0.75
VTI1A-207ENST00000489357 LCE2DQ5TA82 110 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-207ENST00000489357 HSCBQ8IWL3 235 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 LINC00116Q8NCU8 138 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 SSH3Q8TE77 659 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 DNAAF4Q8WXU2 420 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 FBXW7Q969H0 707 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 TBC1D2Q9BYX2 928 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 LRRCC1Q9C099 1032 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 PDGFDQ9GZP0 370 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-207ENST00000489357 USP44Q9H0E7 712 aa10.39□□□□□ -0.75
VTI1A-207ENST00000489357 F6X3S4 739 aa10.38□□□□□ -0.75
VTI1A-207ENST00000489357 KCNQ3O43525 872 aa10.38□□□□□ -0.75
VTI1A-207ENST00000489357 ZDHHC16Q969W1 377 aa10.38□□□□□ -0.75
VTI1A-207ENST00000489357 ZNF496Q96IT1 587 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-207ENST00000489357 ANTXR1Q9H6X2 564 aa10.38□□□□□ -0.75
VTI1A-207ENST00000489357 STK32BQ9NY57 414 aa10.38□□□□□ -0.75
VTI1A-207ENST00000489357 STAP2Q9UGK3 403 aa10.38□□□□□ -0.75
VTI1A-207ENST00000489357 SRCAPQ6ZRS2 3230 aa10.37□□□□□ -0.75
VTI1A-207ENST00000489357 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
VTI1A-207ENST00000489357 SALL3Q9BXA9 1300 aa10.37□□□□□ -0.75
VTI1A-207ENST00000489357 LAMB4A4D0S4 1761 aa10.37□□□□□ -0.75
VTI1A-207ENST00000489357 GSPT1P15170 499 aaKnown RBP10.37□□□□□ -0.75
VTI1A-207ENST00000489357 ATP6V1AP38606 617 aa10.37□□□□□ -0.75
VTI1A-207ENST00000489357 NFKBIBQ15653 356 aa10.37□□□□□ -0.75
VTI1A-207ENST00000489357 BEND3Q5T5X7 828 aa10.37□□□□□ -0.75
VTI1A-207ENST00000489357 KSR2Q6VAB6 950 aa10.37□□□□□ -0.75
VTI1A-207ENST00000489357 AMIGO3Q86WK7 504 aa10.37□□□□□ -0.75
VTI1A-207ENST00000489357 DDX21Q9NR30 783 aaKnown RBP eCLIP10.37□□□□□ -0.75
VTI1A-207ENST00000489357 UTYO14607 1347 aa10.36□□□□□ -0.75
VTI1A-207ENST00000489357 PNPLA7Q6ZV29 1317 aa10.36□□□□□ -0.75
VTI1A-207ENST00000489357 CNTNAP4Q9C0A0 1308 aa10.36□□□□□ -0.75
VTI1A-207ENST00000489357 PTCD1O75127 700 aaKnown RBP10.36□□□□□ -0.75
VTI1A-207ENST00000489357 PDE1AP54750 535 aa10.36□□□□□ -0.75
VTI1A-207ENST00000489357 RABEP1Q15276 862 aa10.36□□□□□ -0.75
VTI1A-207ENST00000489357 LINS1Q8NG48 757 aa10.36□□□□□ -0.75
VTI1A-207ENST00000489357 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
VTI1A-207ENST00000489357 ADCY9O60503 1353 aa10.36□□□□□ -0.75
VTI1A-207ENST00000489357 COL15A1P39059 1388 aa10.36□□□□□ -0.75
VTI1A-207ENST00000489357 CYP19A1P11511 503 aaPredicted RBP10.35□□□□□ -0.75
VTI1A-207ENST00000489357 VARS2Q5ST30 1063 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms