RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
CTNS-206ENST00000488623 SERPINB2P05120 415 aa18.8■□□□□ 0.6
CTNS-206ENST00000488623 CTSWP56202 376 aa18.8■□□□□ 0.6
CTNS-206ENST00000488623 SKAP1Q86WV1 359 aa18.8■□□□□ 0.6
CTNS-206ENST00000488623 PA2G4Q9UQ80 394 aaKnown RBP18.8■□□□□ 0.6
CTNS-206ENST00000488623 EXOC6BQ9Y2D4 811 aa18.8■□□□□ 0.6
CTNS-206ENST00000488623 NOP58Q9Y2X3 529 aaKnown RBP18.8■□□□□ 0.6
CTNS-206ENST00000488623 CHMP3Q9Y3E7 222 aa18.8■□□□□ 0.6
CTNS-206ENST00000488623 MYH3P11055 1940 aa18.79■□□□□ 0.6
CTNS-206ENST00000488623 GTF2E1P29083 439 aaPredicted RBP18.79■□□□□ 0.6
CTNS-206ENST00000488623 NUCB1Q02818 461 aa18.79■□□□□ 0.6
CTNS-206ENST00000488623 CCDC24Q8N4L8 307 aa18.79■□□□□ 0.6
CTNS-206ENST00000488623 KLHDC4Q8TBB5 520 aa18.79■□□□□ 0.6
CTNS-206ENST00000488623 CCDC85AQ96PX6 553 aaPredicted RBP18.79■□□□□ 0.6
CTNS-206ENST00000488623 HSP90B1P14625 803 aaKnown RBP18.78■□□□□ 0.6
CTNS-206ENST00000488623 PTPN12Q05209 780 aaKnown RBP18.78■□□□□ 0.6
CTNS-206ENST00000488623 ANKRD45Q5TZF3 282 aa18.78■□□□□ 0.6
CTNS-206ENST00000488623 C3orf67Q6ZVT6 689 aa18.78■□□□□ 0.6
CTNS-206ENST00000488623 SLC16A10Q8TF71 515 aa18.78■□□□□ 0.6
CTNS-206ENST00000488623 FHDC1Q9C0D6 1143 aaPredicted RBP18.78■□□□□ 0.6
CTNS-206ENST00000488623 COPRSQ9NQ92 184 aa18.78■□□□□ 0.6
CTNS-206ENST00000488623 ABCC12Q96J65 1359 aa18.78■□□□□ 0.6
CTNS-206ENST00000488623 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
CTNS-206ENST00000488623 FAM161AQ3B820 660 aa18.77■□□□□ 0.6
CTNS-206ENST00000488623 MSL1Q68DK7 614 aa18.77■□□□□ 0.6
CTNS-206ENST00000488623 PRR5LQ6MZQ0 368 aa18.77■□□□□ 0.6
CTNS-206ENST00000488623 GREM2Q9H772 168 aa18.77■□□□□ 0.6
CTNS-206ENST00000488623 LAMB2P55268 1798 aa18.77■□□□□ 0.6
CTNS-206ENST00000488623 APBB1O00213 710 aa18.76■□□□□ 0.59
CTNS-206ENST00000488623 SF3B3Q15393 1217 aaKnown RBP18.76■□□□□ 0.59
CTNS-206ENST00000488623 CHD1LQ86WJ1 897 aa18.76■□□□□ 0.59
CTNS-206ENST00000488623 CNBD1Q8NA66 436 aa18.76■□□□□ 0.59
CTNS-206ENST00000488623 SMARCA5O60264 1052 aaPredicted RBP18.75■□□□□ 0.59
CTNS-206ENST00000488623 RAB11FIP3O75154 756 aa18.75■□□□□ 0.59
CTNS-206ENST00000488623 MMP10P09238 476 aa18.75■□□□□ 0.59
CTNS-206ENST00000488623 IFIT5Q13325 482 aaKnown RBP18.75■□□□□ 0.59
CTNS-206ENST00000488623 CCDC57Q2TAC2 916 aa18.75■□□□□ 0.59
CTNS-206ENST00000488623 ZNF594Q96JF6 807 aaPredicted RBP18.75■□□□□ 0.59
CTNS-206ENST00000488623 ITGA6P23229 1130 aa18.74■□□□□ 0.59
CTNS-206ENST00000488623 G3BP1Q13283 466 aaKnown RBP eCLIP18.74■□□□□ 0.59
CTNS-206ENST00000488623 HSP90AB4PQ58FF6 505 aa18.74■□□□□ 0.59
CTNS-206ENST00000488623 NLRP3Q96P20 1036 aa18.74■□□□□ 0.59
CTNS-206ENST00000488623 SYT17Q9BSW7 474 aa18.74■□□□□ 0.59
CTNS-206ENST00000488623 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
CTNS-206ENST00000488623 SIL1Q9H173 461 aa18.74■□□□□ 0.59
CTNS-206ENST00000488623 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
CTNS-206ENST00000488623 NPHP1O15259 732 aa18.73■□□□□ 0.59
CTNS-206ENST00000488623 PDE4AP27815 886 aa18.73■□□□□ 0.59
CTNS-206ENST00000488623 CCDC152Q4G0S7 254 aa18.73■□□□□ 0.59
CTNS-206ENST00000488623 RHPN1Q8TCX5 695 aa18.73■□□□□ 0.59
CTNS-206ENST00000488623 SEC31BQ9NQW1 1179 aa18.73■□□□□ 0.59
CTNS-206ENST00000488623 PARP3Q9Y6F1 533 aa18.73■□□□□ 0.59
CTNS-206ENST00000488623 SASH1O94885 1247 aa18.72■□□□□ 0.59
CTNS-206ENST00000488623 POLD1P28340 1107 aa18.72■□□□□ 0.59
CTNS-206ENST00000488623 ATG9AQ7Z3C6 839 aa18.72■□□□□ 0.59
CTNS-206ENST00000488623 C16orf71Q8IYS4 520 aaPredicted RBP18.72■□□□□ 0.59
CTNS-206ENST00000488623 PUS3Q9BZE2 481 aaKnown RBP18.72■□□□□ 0.59
CTNS-206ENST00000488623 LRRCC1Q9C099 1032 aa18.72■□□□□ 0.59
CTNS-206ENST00000488623 CHD4Q14839 1912 aa18.72■□□□□ 0.59
CTNS-206ENST00000488623 NRXN2Q9P2S2 1712 aa18.71■□□□□ 0.59
CTNS-206ENST00000488623 RTL9Q8NET4 1388 aa18.71■□□□□ 0.59
CTNS-206ENST00000488623 ST5P78524 1137 aa18.71■□□□□ 0.59
CTNS-206ENST00000488623 OS9Q13438 667 aaPredicted RBP18.71■□□□□ 0.59
CTNS-206ENST00000488623 LRRC24Q50LG9 513 aa18.71■□□□□ 0.59
CTNS-206ENST00000488623 EYA2O00167 538 aa18.7■□□□□ 0.58
CTNS-206ENST00000488623 RGS3P49796 1198 aa18.7■□□□□ 0.58
CTNS-206ENST00000488623 RIC1Q4ADV7 1423 aa18.7■□□□□ 0.58
CTNS-206ENST00000488623 TAF7LQ5H9L4 462 aa18.7■□□□□ 0.58
CTNS-206ENST00000488623 ERC1Q8IUD2 1116 aa18.7■□□□□ 0.58
CTNS-206ENST00000488623 KIF1BPQ96EK5 621 aa18.7■□□□□ 0.58
CTNS-206ENST00000488623 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.7■□□□□ 0.58
CTNS-206ENST00000488623 CIAO1O76071 339 aa18.69■□□□□ 0.58
CTNS-206ENST00000488623 KLHL34Q8N239 644 aa18.69■□□□□ 0.58
CTNS-206ENST00000488623 IL1RAPL2Q9NP60 686 aa18.69■□□□□ 0.58
CTNS-206ENST00000488623 ZBTB47Q9UFB7 747 aaPredicted RBP18.69■□□□□ 0.58
CTNS-206ENST00000488623 FBXO3Q9UK99 471 aa18.69■□□□□ 0.58
CTNS-206ENST00000488623 TNRC6CQ9HCJ0 1690 aaKnown RBP18.69■□□□□ 0.58
CTNS-206ENST00000488623 IL15P40933 162 aaPredicted RBP18.68■□□□□ 0.58
CTNS-206ENST00000488623 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
CTNS-206ENST00000488623 RIPOR2Q9Y4F9 1068 aa18.68■□□□□ 0.58
CTNS-206ENST00000488623 TAF1P21675 1872 aa18.68■□□□□ 0.58
CTNS-206ENST00000488623 KLRG2A4D1S0 409 aaPredicted RBP18.67■□□□□ 0.58
CTNS-206ENST00000488623 YY1P25490 414 aa18.67■□□□□ 0.58
CTNS-206ENST00000488623 TFCP2Q12800 502 aa18.67■□□□□ 0.58
CTNS-206ENST00000488623 LDHAL6AQ6ZMR3 332 aa18.67■□□□□ 0.58
CTNS-206ENST00000488623 OTUD7AQ8TE49 926 aaPredicted RBP18.67■□□□□ 0.58
CTNS-206ENST00000488623 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
CTNS-206ENST00000488623 COL4A1P02462 1669 aa18.66■□□□□ 0.58
CTNS-206ENST00000488623 CRY2Q49AN0 593 aa18.66■□□□□ 0.58
CTNS-206ENST00000488623 ANKRD31Q8N7Z5 1873 aa18.66■□□□□ 0.58
CTNS-206ENST00000488623 PLEKHM2Q8IWE5 1019 aa18.65■□□□□ 0.58
CTNS-206ENST00000488623 CELF1Q92879 486 aaKnown RBP18.65■□□□□ 0.58
CTNS-206ENST00000488623 CDC5LQ99459 802 aaKnown RBP18.65■□□□□ 0.58
CTNS-206ENST00000488623 IGHMBP2P38935 993 aaKnown RBP18.64■□□□□ 0.57
CTNS-206ENST00000488623 RPS8P62241 208 aaKnown RBP18.64■□□□□ 0.57
CTNS-206ENST00000488623 DDX46Q7L014 1031 aaKnown RBP18.64■□□□□ 0.57
CTNS-206ENST00000488623 ANKRD18AQ8IVF6 992 aa18.64■□□□□ 0.57
CTNS-206ENST00000488623 CLASRPQ8N2M8 674 aaKnown RBP18.64■□□□□ 0.57
CTNS-206ENST00000488623 EAF2Q96CJ1 260 aaPredicted RBP18.64■□□□□ 0.57
CTNS-206ENST00000488623 CNNM1Q9NRU3 951 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms