RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 IDI1Q13907 227 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 PLEKHO1Q53GL0 409 aaPredicted RBP10.03□□□□□ -0.8
GABRE-209ENST00000486255 FEZ2Q9UHY8 353 aaPredicted RBP10.03□□□□□ -0.8
GABRE-209ENST00000486255 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.82e-7■□□□□ 10.5
GABRE-209ENST00000486255 TACC1O75410 805 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 ATP11AP98196 1134 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 TMEM266Q2M3C6 531 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 MAP7D1Q3KQU3 841 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 A0A1B0GUA9 196 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 BIN1O00499 593 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 ZBTB16Q05516 673 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 CCDC40Q4G0X9 1142 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 NSD2O96028 1365 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 PNISRQ8TF01 805 aaKnown RBP10.03□□□□□ -0.8
GABRE-209ENST00000486255 FERMT1Q9BQL6 677 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 RNF216Q9NWF9 866 aaPredicted RBP10.03□□□□□ -0.8
GABRE-209ENST00000486255 NLRP2Q9NX02 1062 aa10.03□□□□□ -0.8
GABRE-209ENST00000486255 DISP3Q9P2K9 1392 aa10.02□□□□□ -0.8
GABRE-209ENST00000486255 CIB2O75838 187 aa10.02□□□□□ -0.8
GABRE-209ENST00000486255 GBP1P32455 592 aa10.02□□□□□ -0.8
GABRE-209ENST00000486255 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.82e-7■■■■■ 28.1
GABRE-209ENST00000486255 CLNS1AP54105 237 aaKnown RBP10.02□□□□□ -0.8
GABRE-209ENST00000486255 TNRQ92752 1358 aa10.02□□□□□ -0.8
GABRE-209ENST00000486255 TET3O43151 1660 aa10.02□□□□□ -0.8
GABRE-209ENST00000486255 PRC1O43663 620 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 LMNTD2Q8IXW0 634 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 SEC62Q99442 399 aaKnown RBP10.02□□□□□ -0.81
GABRE-209ENST00000486255 U3KPZ7 1027 aaPredicted RBP10.02□□□□□ -0.81
GABRE-209ENST00000486255 GOLIM4O00461 696 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 MYO1BO43795 1136 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 SLU7O95391 586 aaKnown RBP10.02□□□□□ -0.81
GABRE-209ENST00000486255 GJB2P29033 226 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 PPFIBP2Q8ND30 876 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 RBM42Q9BTD8 480 aaKnown RBP10.02□□□□□ -0.81
GABRE-209ENST00000486255 CDK19Q9BWU1 502 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 STIM2Q9P246 746 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 DNAI1Q9UI46 699 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 CTAGE9A4FU28 777 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 SRGAP3O43295 1099 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 CFAP58Q5T655 872 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 ZNF428Q96B54 188 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 AIDAQ96BJ3 306 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 IL1RAPL2Q9NP60 686 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 SPINK5Q9NQ38 1064 aaPredicted RBP10.02□□□□□ -0.81
GABRE-209ENST00000486255 SAMD15Q9P1V8 674 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 SSX2IPQ9Y2D8 614 aa10.02□□□□□ -0.81
GABRE-209ENST00000486255 CPLX4Q7Z7G2 160 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 CCDC63Q8NA47 563 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 ZNF692Q9BU19 519 aaPredicted RBP10.01□□□□□ -0.81
GABRE-209ENST00000486255 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 RAB34Q9BZG1 259 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 COL17A1Q9UMD9 1497 aaPredicted RBP10.01□□□□□ -0.81
GABRE-209ENST00000486255 CCDC77Q9BR77 488 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 RBM28Q9NW13 759 aaKnown RBP10.01□□□□□ -0.81
GABRE-209ENST00000486255 BUB1BO60566 1050 aaPredicted RBP10.01□□□□□ -0.81
GABRE-209ENST00000486255 AMPD3Q01432 767 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 CETN1Q12798 172 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 ISM2Q6H9L7 571 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 SUDS3Q9H7L9 328 aaPredicted RBP10.01□□□□□ -0.81
GABRE-209ENST00000486255 HMGB1P09429 215 aaKnown RBP10.01□□□□□ -0.81
GABRE-209ENST00000486255 UBE2HP62256 183 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 SETDB1Q15047 1291 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 STMN2Q93045 179 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 UBASH3AP57075 661 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 SPTY2D1Q68D10 685 aaPredicted RBP10.01□□□□□ -0.81
GABRE-209ENST00000486255 KANK3Q6NY19 840 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 FAM76AQ8TAV0 307 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 NSD3Q9BZ95 1437 aa10.01□□□□□ -0.81
GABRE-209ENST00000486255 PTPRTO14522 1441 aa10□□□□□ -0.81
GABRE-209ENST00000486255 ACTN2P35609 894 aa10□□□□□ -0.81
GABRE-209ENST00000486255 CYLC1P35663 651 aaPredicted RBP10□□□□□ -0.81
GABRE-209ENST00000486255 TTC12Q9H892 705 aaPredicted RBP10□□□□□ -0.81
GABRE-209ENST00000486255 LIMCH1Q9UPQ0 1083 aa10□□□□□ -0.81
GABRE-209ENST00000486255 A0A087WZG4 1122 aa10□□□□□ -0.81
GABRE-209ENST00000486255 ZEB2O60315 1214 aa10□□□□□ -0.81
GABRE-209ENST00000486255 RAB11FIP3O75154 756 aa10□□□□□ -0.81
GABRE-209ENST00000486255 ZNF165P49910 485 aa10□□□□□ -0.81
GABRE-209ENST00000486255 LUC7L2Q9Y383 392 aaKnown RBP10□□□□□ -0.81
GABRE-209ENST00000486255 BAG4O95429 457 aaKnown RBP10□□□□□ -0.81
GABRE-209ENST00000486255 TBC1D5Q92609 795 aa10□□□□□ -0.81
GABRE-209ENST00000486255 TRIM7Q9C029 511 aa10□□□□□ -0.81
GABRE-209ENST00000486255 SKILP12757 684 aa10□□□□□ -0.81
GABRE-209ENST00000486255 CEP85LQ5SZL2 805 aa10□□□□□ -0.81
GABRE-209ENST00000486255 CACNA2D3Q8IZS8 1091 aa10□□□□□ -0.81
GABRE-209ENST00000486255 CALML4Q96GE6 196 aa10□□□□□ -0.81
GABRE-209ENST00000486255 MPHOSPH8Q99549 860 aa10□□□□□ -0.81
GABRE-209ENST00000486255 PYM1Q9BRP8 204 aaKnown RBP10□□□□□ -0.81
GABRE-209ENST00000486255 GDPD2Q9HCC8 539 aa10□□□□□ -0.81
GABRE-209ENST00000486255 CCDC196A0A1B0GTZ2 297 aa10□□□□□ -0.81
GABRE-209ENST00000486255 CASQ2O14958 399 aaPredicted RBP10□□□□□ -0.81
GABRE-209ENST00000486255 MYL6BP14649 208 aa10□□□□□ -0.81
GABRE-209ENST00000486255 MX1P20591 662 aa10□□□□□ -0.81
GABRE-209ENST00000486255 RPAP2Q8IXW5 612 aaPredicted RBP10□□□□□ -0.81
GABRE-209ENST00000486255 LRP2BPQ9P2M1 347 aa10□□□□□ -0.81
GABRE-209ENST00000486255 MKRN1Q9UHC7 482 aaKnown RBP10□□□□□ -0.81
GABRE-209ENST00000486255 SMARCA5O60264 1052 aaPredicted RBP9.99□□□□□ -0.81
GABRE-209ENST00000486255 TUBB4AP04350 444 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 KRT13P13646 458 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 PCK1P35558 622 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms