RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-208ENST00000482651 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
HDGF-208ENST00000482651 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
HDGF-208ENST00000482651 KDM2BQ8NHM5 1336 aa11.32□□□□□ -0.6
HDGF-208ENST00000482651 LTBP3Q9NS15 1303 aa11.32□□□□□ -0.6
HDGF-208ENST00000482651 SENP3-EIF4A1A0A087X0R7 540 aa11.31□□□□□ -0.6
HDGF-208ENST00000482651 TRAK2O60296 914 aa11.31□□□□□ -0.6
HDGF-208ENST00000482651 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
HDGF-208ENST00000482651 ALDH1B1P30837 517 aa11.31□□□□□ -0.6
HDGF-208ENST00000482651 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
HDGF-208ENST00000482651 CRY2Q49AN0 593 aa11.31□□□□□ -0.6
HDGF-208ENST00000482651 HSP90AB3PQ58FF7 597 aa11.31□□□□□ -0.6
HDGF-208ENST00000482651 C7orf43Q8WVR3 580 aa11.31□□□□□ -0.6
HDGF-208ENST00000482651 NMRK2Q9NPI5 230 aa11.31□□□□□ -0.6
HDGF-208ENST00000482651 A6NJR5 290 aa11.3□□□□□ -0.6
HDGF-208ENST00000482651 PSEN1P49768 467 aa11.3□□□□□ -0.6
HDGF-208ENST00000482651 CCDC93Q567U6 631 aa11.3□□□□□ -0.6
HDGF-208ENST00000482651 KCTD17Q8N5Z5 321 aa11.3□□□□□ -0.6
HDGF-208ENST00000482651 ANP32EQ9BTT0 268 aa11.3□□□□□ -0.6
HDGF-208ENST00000482651 UTP14AQ9BVJ6 771 aaKnown RBP11.3□□□□□ -0.6
HDGF-208ENST00000482651 TAOK3Q9H2K8 898 aa11.3□□□□□ -0.6
HDGF-208ENST00000482651 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
HDGF-208ENST00000482651 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
HDGF-208ENST00000482651 TCIRG1Q13488 830 aa11.29□□□□□ -0.6
HDGF-208ENST00000482651 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
HDGF-208ENST00000482651 NLRP10Q86W26 655 aa11.29□□□□□ -0.6
HDGF-208ENST00000482651 PLBD2Q8NHP8 589 aa11.29□□□□□ -0.6
HDGF-208ENST00000482651 RPGRQ92834 1020 aaKnown RBP11.29□□□□□ -0.6
HDGF-208ENST00000482651 HYPKQ9NX55 129 aa11.29□□□□□ -0.6
HDGF-208ENST00000482651 GLTPD2A6NH11 291 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 TOMM70O94826 608 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 PDE4AP27815 886 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 WWC1Q8IX03 1113 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 RTKN2Q8IZC4 609 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 C8orf58Q8NAV2 365 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 CHMP4AQ9BY43 222 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
HDGF-208ENST00000482651 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.6
HDGF-208ENST00000482651 ELL2O00472 640 aaPredicted RBP11.27□□□□□ -0.61
HDGF-208ENST00000482651 FKBP4Q02790 459 aaKnown RBP eCLIP11.27□□□□□ -0.61
HDGF-208ENST00000482651 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
HDGF-208ENST00000482651 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
HDGF-208ENST00000482651 RBM17Q96I25 401 aaKnown RBP11.27□□□□□ -0.61
HDGF-208ENST00000482651 NLRP3Q96P20 1036 aa11.27□□□□□ -0.61
HDGF-208ENST00000482651 CRAMP1Q96RY5 1269 aa11.27□□□□□ -0.61
HDGF-208ENST00000482651 CRISPLD2Q9H0B8 497 aa11.27□□□□□ -0.61
HDGF-208ENST00000482651 IL16Q14005 1332 aa11.27□□□□□ -0.61
HDGF-208ENST00000482651 GPR37O15354 613 aa11.26□□□□□ -0.61
HDGF-208ENST00000482651 HSPA6P17066 643 aa11.26□□□□□ -0.61
HDGF-208ENST00000482651 CC2D2BQ6DHV5 1058 aa11.26□□□□□ -0.61
HDGF-208ENST00000482651 OLFM4Q6UX06 510 aa11.26□□□□□ -0.61
HDGF-208ENST00000482651 C16orf71Q8IYS4 520 aaPredicted RBP11.26□□□□□ -0.61
HDGF-208ENST00000482651 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
HDGF-208ENST00000482651 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
HDGF-208ENST00000482651 ISCA1Q9BUE6 129 aa11.26□□□□□ -0.61
HDGF-208ENST00000482651 RRAGCQ9HB90 399 aa11.26□□□□□ -0.61
HDGF-208ENST00000482651 TRMT112Q9UI30 125 aaKnown RBP11.26□□□□□ -0.61
HDGF-208ENST00000482651 NUP98P52948 1817 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 SLX4Q8IY92 1834 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 PPEF1O14829 653 aaPredicted RBP11.25□□□□□ -0.61
HDGF-208ENST00000482651 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 CCDC30Q5VVM6 783 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 TSPYL6Q8N831 410 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 TSR2Q969E8 191 aaKnown RBP11.25□□□□□ -0.61
HDGF-208ENST00000482651 DDX27Q96GQ7 796 aaKnown RBP11.25□□□□□ -0.61
HDGF-208ENST00000482651 TRAIPQ9BWF2 469 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 PHAXQ9H814 394 aaKnown RBP11.25□□□□□ -0.61
HDGF-208ENST00000482651 SH3TC1Q8TE82 1336 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 ARFGEF2Q9Y6D5 1785 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
HDGF-208ENST00000482651 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
HDGF-208ENST00000482651 VEGFAP15692 232 aaPredicted RBP11.24□□□□□ -0.61
HDGF-208ENST00000482651 TRIM28Q13263 835 aaKnown RBP11.24□□□□□ -0.61
HDGF-208ENST00000482651 GRIPAP1Q4V328 841 aa11.24□□□□□ -0.61
HDGF-208ENST00000482651 RIC3Q7Z5B4 369 aa11.24□□□□□ -0.61
HDGF-208ENST00000482651 SYNE4Q8N205 404 aa11.24□□□□□ -0.61
HDGF-208ENST00000482651 PSMD1Q99460 953 aa11.24□□□□□ -0.61
HDGF-208ENST00000482651 ZNF277Q9NRM2 450 aaPredicted RBP11.24□□□□□ -0.61
HDGF-208ENST00000482651 SBF1O95248 1867 aa11.23□□□□□ -0.61
HDGF-208ENST00000482651 FER1L6Q2WGJ9 1857 aa11.23□□□□□ -0.61
HDGF-208ENST00000482651 ATP5J2-PTCD1G3V325 749 aa11.23□□□□□ -0.61
HDGF-208ENST00000482651 IARSP41252 1262 aaKnown RBP11.23□□□□□ -0.61
HDGF-208ENST00000482651 FSTL1Q12841 308 aa11.23□□□□□ -0.61
HDGF-208ENST00000482651 WDR63Q8IWG1 891 aa11.23□□□□□ -0.61
HDGF-208ENST00000482651 ABCC4O15439 1325 aa11.23□□□□□ -0.61
HDGF-208ENST00000482651 DDX58O95786 925 aaKnown RBP11.22□□□□□ -0.61
HDGF-208ENST00000482651 TWISTNBQ3B726 338 aaPredicted RBP11.22□□□□□ -0.61
HDGF-208ENST00000482651 TIAM2Q8IVF5 1701 aa11.22□□□□□ -0.61
HDGF-208ENST00000482651 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
HDGF-208ENST00000482651 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
HDGF-208ENST00000482651 FANCIQ9NVI1 1328 aa11.21□□□□□ -0.61
HDGF-208ENST00000482651 POTECB2RU33 542 aa11.21□□□□□ -0.61
HDGF-208ENST00000482651 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
HDGF-208ENST00000482651 RAD21O60216 631 aa11.21□□□□□ -0.61
HDGF-208ENST00000482651 BBOX1O75936 387 aa11.21□□□□□ -0.61
HDGF-208ENST00000482651 DDNO94850 711 aaPredicted RBP11.21□□□□□ -0.61
HDGF-208ENST00000482651 GRAPQ13588 217 aa11.21□□□□□ -0.61
HDGF-208ENST00000482651 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms