RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-208ENST00000482651 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
HDGF-208ENST00000482651 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
HDGF-208ENST00000482651 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
HDGF-208ENST00000482651 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
HDGF-208ENST00000482651 ABCC9O60706 1549 aa18.95■□□□□ 0.62
HDGF-208ENST00000482651 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
HDGF-208ENST00000482651 RB1CC1Q8TDY2 1594 aa18.13■□□□□ 0.49
HDGF-208ENST00000482651 NACADO15069 1562 aa18.07■□□□□ 0.48
HDGF-208ENST00000482651 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
HDGF-208ENST00000482651 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
HDGF-208ENST00000482651 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
HDGF-208ENST00000482651 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
HDGF-208ENST00000482651 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
HDGF-208ENST00000482651 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
HDGF-208ENST00000482651 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
HDGF-208ENST00000482651 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
HDGF-208ENST00000482651 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
HDGF-208ENST00000482651 SHROOM4Q9ULL8 1493 aa17.44■□□□□ 0.38
HDGF-208ENST00000482651 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
HDGF-208ENST00000482651 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
HDGF-208ENST00000482651 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
HDGF-208ENST00000482651 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
HDGF-208ENST00000482651 EHMT2Q96KQ7 1210 aa16.82■□□□□ 0.28
HDGF-208ENST00000482651 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
HDGF-208ENST00000482651 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
HDGF-208ENST00000482651 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
HDGF-208ENST00000482651 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
HDGF-208ENST00000482651 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
HDGF-208ENST00000482651 HMGXB3Q12766 1538 aa16.59■□□□□ 0.25
HDGF-208ENST00000482651 MROH2BQ7Z745 1585 aa16.54■□□□□ 0.24
HDGF-208ENST00000482651 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
HDGF-208ENST00000482651 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
HDGF-208ENST00000482651 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
HDGF-208ENST00000482651 KCNA4P22459 653 aa16.42■□□□□ 0.22
HDGF-208ENST00000482651 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
HDGF-208ENST00000482651 NESP48681 1621 aa16.33■□□□□ 0.2
HDGF-208ENST00000482651 WIZO95785 1651 aa16.3■□□□□ 0.2
HDGF-208ENST00000482651 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
HDGF-208ENST00000482651 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
HDGF-208ENST00000482651 CUX2O14529 1486 aa16.26■□□□□ 0.19
HDGF-208ENST00000482651 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.19
HDGF-208ENST00000482651 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
HDGF-208ENST00000482651 ADRA2BP18089 450 aa16.18■□□□□ 0.18
HDGF-208ENST00000482651 TOP2AP11388 1531 aaKnown RBP16.17■□□□□ 0.18
HDGF-208ENST00000482651 THOC2Q8NI27 1593 aaKnown RBP16.11■□□□□ 0.17
HDGF-208ENST00000482651 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
HDGF-208ENST00000482651 CFTRP13569 1480 aa16.07■□□□□ 0.16
HDGF-208ENST00000482651 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
HDGF-208ENST00000482651 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
HDGF-208ENST00000482651 FANCD2Q9BXW9 1451 aa16.01■□□□□ 0.15
HDGF-208ENST00000482651 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
HDGF-208ENST00000482651 CCDC88BA6NC98 1476 aa15.98■□□□□ 0.15
HDGF-208ENST00000482651 DNAJC5Q9H3Z4 198 aa15.98■□□□□ 0.15
HDGF-208ENST00000482651 WDR62O43379 1518 aa15.97■□□□□ 0.15
HDGF-208ENST00000482651 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
HDGF-208ENST00000482651 SLC24A1O60721 1099 aa15.85■□□□□ 0.13
HDGF-208ENST00000482651 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
HDGF-208ENST00000482651 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
HDGF-208ENST00000482651 SUPT5HO00267 1087 aaKnown RBP15.73■□□□□ 0.11
HDGF-208ENST00000482651 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
HDGF-208ENST00000482651 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
HDGF-208ENST00000482651 ABCC8Q09428 1581 aa15.72■□□□□ 0.11
HDGF-208ENST00000482651 IFT140Q96RY7 1462 aa15.69■□□□□ 0.1
HDGF-208ENST00000482651 DNMBPQ6XZF7 1577 aa15.68■□□□□ 0.1
HDGF-208ENST00000482651 ZNF608Q9ULD9 1512 aaPredicted RBP15.62■□□□□ 0.09
HDGF-208ENST00000482651 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
HDGF-208ENST00000482651 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
HDGF-208ENST00000482651 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
HDGF-208ENST00000482651 CUX1P39880 1505 aa15.53■□□□□ 0.08
HDGF-208ENST00000482651 SOGA1O94964 1423 aa15.52■□□□□ 0.08
HDGF-208ENST00000482651 EIF4G3O43432 1585 aaKnown RBP15.52■□□□□ 0.07
HDGF-208ENST00000482651 FGD5Q6ZNL6 1462 aa15.52■□□□□ 0.07
HDGF-208ENST00000482651 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.073e-7■■■■■ 35
HDGF-208ENST00000482651 RAD54L2Q9Y4B4 1467 aa15.51■□□□□ 0.07
HDGF-208ENST00000482651 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.07
HDGF-208ENST00000482651 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
HDGF-208ENST00000482651 WRNQ14191 1432 aaPredicted RBP eCLIP15.37■□□□□ 0.05
HDGF-208ENST00000482651 RTN4Q9NQC3 1192 aaKnown RBP15.37■□□□□ 0.05
HDGF-208ENST00000482651 GRIN2BQ13224 1484 aa15.37■□□□□ 0.05
HDGF-208ENST00000482651 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
HDGF-208ENST00000482651 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
HDGF-208ENST00000482651 FBLN2P98095 1184 aa15.36■□□□□ 0.05
HDGF-208ENST00000482651 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
HDGF-208ENST00000482651 MAGI1Q96QZ7 1491 aaPredicted RBP15.34■□□□□ 0.05
HDGF-208ENST00000482651 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
HDGF-208ENST00000482651 TOP2BQ02880 1626 aa15.33■□□□□ 0.04
HDGF-208ENST00000482651 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
HDGF-208ENST00000482651 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
HDGF-208ENST00000482651 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
HDGF-208ENST00000482651 CHD1O14646 1710 aa15.31■□□□□ 0.04
HDGF-208ENST00000482651 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
HDGF-208ENST00000482651 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
HDGF-208ENST00000482651 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
HDGF-208ENST00000482651 SYNJ2O15056 1496 aa15.28■□□□□ 0.04
HDGF-208ENST00000482651 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
HDGF-208ENST00000482651 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
HDGF-208ENST00000482651 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
HDGF-208ENST00000482651 FOXD1Q16676 465 aa15.27■□□□□ 0.04
HDGF-208ENST00000482651 PBRM1Q86U86 1689 aa15.23■□□□□ 0.03
HDGF-208ENST00000482651 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms