RNA–Protein interactions for RNA: ENST00000477112.1

DDX17-208, Transcript of DEAD-box helicase 17, human

TSL 2

Gene DDX17, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX17-208	ENST00000477112	SHKBP1	Q8TBC3	707 aa		4.68	□□□□□ -1.66
DDX17-208	ENST00000477112	UBL7	Q96S82	380 aa	Predicted RBP	4.68	□□□□□ -1.66
DDX17-208	ENST00000477112	LPIN3	Q9BQK8	851 aa		4.68	□□□□□ -1.66
DDX17-208	ENST00000477112	FARP2	O94887	1054 aa	Predicted RBP	4.67	□□□□□ -1.66
DDX17-208	ENST00000477112	NFKB1	P19838	968 aa		4.67	□□□□□ -1.66
DDX17-208	ENST00000477112	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
DDX17-208	ENST00000477112	KRTAP19-4	Q3LI73	84 aa		4.67	□□□□□ -1.66
DDX17-208	ENST00000477112	GIMAP7	Q8NHV1	300 aa		4.67	□□□□□ -1.66
DDX17-208	ENST00000477112	C7orf43	Q8WVR3	580 aa		4.67	□□□□□ -1.66
DDX17-208	ENST00000477112	TTC9	Q92623	222 aa		4.67	□□□□□ -1.66
DDX17-208	ENST00000477112	SRA1	Q9HD15	236 aa	Known RBP	4.67	□□□□□ -1.66
DDX17-208	ENST00000477112	NDUFB9	Q9Y6M9	179 aa		4.67	□□□□□ -1.66
DDX17-208	ENST00000477112	WDR64	B1ANS9	1081 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	APBB1	O00213	710 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	RAD21	O60216	631 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	CCIN	Q13939	588 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	UVSSA	Q2YD98	709 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	MAP7D1	Q3KQU3	841 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	C1orf53	Q5VUE5	145 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	MAP4K3	Q8IVH8	894 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	KSR1	Q8IVT5	923 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	WWC1	Q8IX03	1113 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	ARMC10	Q8N2F6	343 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	CHMP3	Q9Y3E7	222 aa		4.66	□□□□□ -1.66
DDX17-208	ENST00000477112	PLAUR	Q03405	335 aa		4.65	□□□□□ -1.67
DDX17-208	ENST00000477112	SLC9A9	Q8IVB4	645 aa		4.65	□□□□□ -1.67
DDX17-208	ENST00000477112	SUSD3	Q96L08	255 aa		4.65	□□□□□ -1.67
DDX17-208	ENST00000477112	SLC38A3	Q99624	504 aa		4.65	□□□□□ -1.67
DDX17-208	ENST00000477112	GSX2	Q9BZM3	304 aa		4.65	□□□□□ -1.67
DDX17-208	ENST00000477112	SMG9	Q9H0W8	520 aa	Known RBP	4.65	□□□□□ -1.67
DDX17-208	ENST00000477112	PRM3	Q9NNZ6	103 aa		4.65	□□□□□ -1.67
DDX17-208	ENST00000477112	ATG3	Q9NT62	314 aa		4.65	□□□□□ -1.67
DDX17-208	ENST00000477112	PIM2	Q9P1W9	311 aa		4.65	□□□□□ -1.67
DDX17-208	ENST00000477112	UBTF	P17480	764 aa	Known RBP	4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	ARID4A	P29374	1257 aa	Predicted RBP	4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	HOXA10	P31260	410 aa	Predicted RBP	4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	CLEC10A	Q8IUN9	316 aa		4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	ZNF280C	Q8ND82	737 aa		4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	KCNF1	Q9H3M0	494 aa		4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	CCDC39	Q9UFE4	941 aa		4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	LEMD3	Q9Y2U8	911 aa		4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	HCN4	Q9Y3Q4	1203 aa		4.64	□□□□□ -1.67
DDX17-208	ENST00000477112	NACAD	O15069	1562 aa		4.64	□□□□□ -1.67
DDX17-208	ENST00000477112		A6NJR5	290 aa		4.63	□□□□□ -1.67
DDX17-208	ENST00000477112	MLLT1	Q03111	559 aa	Predicted RBP	4.63	□□□□□ -1.67
DDX17-208	ENST00000477112	PSME1	Q06323	249 aa		4.63	□□□□□ -1.67
DDX17-208	ENST00000477112	TBCEL	Q5QJ74	424 aa		4.63	□□□□□ -1.67
DDX17-208	ENST00000477112	BTLA	Q7Z6A9	289 aa		4.63	□□□□□ -1.67
DDX17-208	ENST00000477112	VSIG10L	Q86VR7	867 aa		4.63	□□□□□ -1.67
DDX17-208	ENST00000477112	FAM83C	Q9BQN1	747 aa		4.63	□□□□□ -1.67
DDX17-208	ENST00000477112	CHIC2	Q9UKJ5	165 aa		4.63	□□□□□ -1.67
DDX17-208	ENST00000477112	CC2D2A	Q9P2K1	1620 aa		4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	BIN1	O00499	593 aa		4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	SART1	O43290	800 aa	Known RBP	4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	EIF2AK2	P19525	551 aa	Known RBP	4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	BUD31	P41223	144 aa	Predicted RBP	4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	HIF1A	Q16665	826 aa		4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	SH3PXD2A	Q5TCZ1	1133 aa		4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	GDF6	Q6KF10	455 aa	Predicted RBP	4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	IL22RA1	Q8N6P7	574 aa		4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	PLPP7	Q8NBV4	271 aa		4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	AGBL5	Q8NDL9	886 aa		4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	MYRFL	Q96LU7	910 aa		4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	PHACTR1	Q9C0D0	580 aa		4.62	□□□□□ -1.67
DDX17-208	ENST00000477112	MAP3K6	O95382	1288 aa		4.61	□□□□□ -1.67
DDX17-208	ENST00000477112	SETDB1	Q15047	1291 aa		4.61	□□□□□ -1.67
DDX17-208	ENST00000477112	BEND4	Q6ZU67	534 aa		4.61	□□□□□ -1.67
DDX17-208	ENST00000477112	ACAD11	Q709F0	780 aa		4.61	□□□□□ -1.67
DDX17-208	ENST00000477112	DHX32	Q7L7V1	743 aa	Known RBP	4.61	□□□□□ -1.67
DDX17-208	ENST00000477112	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
DDX17-208	ENST00000477112	TRPM4	Q8TD43	1214 aa		4.61	□□□□□ -1.67
DDX17-208	ENST00000477112	ZNF358	Q9NW07	568 aa		4.61	□□□□□ -1.67
DDX17-208	ENST00000477112	SCRIB	Q14160	1630 aa		4.61	□□□□□ -1.67
DDX17-208	ENST00000477112	EPB42	P16452	691 aa		4.6	□□□□□ -1.67
DDX17-208	ENST00000477112	PSMA6	P60900	246 aa	Known RBP	4.6	□□□□□ -1.67
DDX17-208	ENST00000477112	GPLD1	P80108	840 aa		4.6	□□□□□ -1.67
DDX17-208	ENST00000477112	HFE2	Q6ZVN8	426 aa		4.6	□□□□□ -1.67
DDX17-208	ENST00000477112	FAM20C	Q8IXL6	584 aa		4.6	□□□□□ -1.67
DDX17-208	ENST00000477112	TNS4	Q8IZW8	715 aa		4.6	□□□□□ -1.67
DDX17-208	ENST00000477112	BANK1	Q8NDB2	785 aa		4.6	□□□□□ -1.67
DDX17-208	ENST00000477112	FAM46A	Q96IP4	442 aa	Known RBP	4.6	□□□□□ -1.67
DDX17-208	ENST00000477112	PCDHGA11	Q9Y5H2	935 aa		4.6	□□□□□ -1.67
DDX17-208	ENST00000477112	ZBTB42	B2RXF5	422 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	PRNP	P04156	253 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	BMP3	P12645	472 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	FOSL1	P15407	271 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	TRIM26	Q12899	539 aa	Predicted RBP	4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	KRT25	Q7Z3Z0	450 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	FLCN	Q8NFG4	579 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	MFSD14A	Q96MC6	490 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	CECR2	Q9BXF3	1484 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	OSBPL1A	Q9BXW6	950 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	MUC3B	Q9H195	1237 aa		4.59	□□□□□ -1.67
DDX17-208	ENST00000477112	GPR37L1	O60883	481 aa		4.58	□□□□□ -1.68
DDX17-208	ENST00000477112	PAPLN	O95428	1278 aa		4.58	□□□□□ -1.68
DDX17-208	ENST00000477112	MSMP	Q1L6U9	139 aa		4.58	□□□□□ -1.68
DDX17-208	ENST00000477112	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.58	□□□□□ -1.68
DDX17-208	ENST00000477112	PLD4	Q96BZ4	506 aa		4.58	□□□□□ -1.68
DDX17-208	ENST00000477112	CCDC97	Q96F63	343 aa	Predicted RBP	4.58	□□□□□ -1.68

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