RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TAF1P21675 1872 aa20.64■□□□□ 0.89
SMG5-204ENST00000476954 ABCC4O15439 1325 aa20.63■□□□□ 0.89
SMG5-204ENST00000476954 MAP3K15Q6ZN16 1313 aa20.63■□□□□ 0.89
SMG5-204ENST00000476954 DPP8Q6V1X1 898 aaPredicted RBP20.63■□□□□ 0.89
SMG5-204ENST00000476954 SUPT20HQ8NEM7 779 aa20.63■□□□□ 0.89
SMG5-204ENST00000476954 ZNF296Q8WUU4 475 aaPredicted RBP20.63■□□□□ 0.89
SMG5-204ENST00000476954 LAMB2P55268 1798 aa20.63■□□□□ 0.89
SMG5-204ENST00000476954 IBTKQ9P2D0 1353 aaPredicted RBP20.62■□□□□ 0.89
SMG5-204ENST00000476954 RBM26Q5T8P6 1007 aaKnown RBP20.62■□□□□ 0.89
SMG5-204ENST00000476954 TMX4Q9H1E5 349 aaPredicted RBP20.62■□□□□ 0.89
SMG5-204ENST00000476954 ZBTB3Q9H5J0 574 aa20.62■□□□□ 0.89
SMG5-204ENST00000476954 HDAC9Q9UKV0 1011 aa20.62■□□□□ 0.89
SMG5-204ENST00000476954 DUOX1Q9NRD9 1551 aa20.61■□□□□ 0.89
SMG5-204ENST00000476954 ERVV-1B6SEH8 477 aa20.61■□□□□ 0.89
SMG5-204ENST00000476954 TBC1D8O95759 1140 aa20.61■□□□□ 0.89
SMG5-204ENST00000476954 DCTN1Q14203 1278 aa20.61■□□□□ 0.89
SMG5-204ENST00000476954 RASAL3Q86YV0 1011 aa20.61■□□□□ 0.89
SMG5-204ENST00000476954 MPNDQ8N594 471 aa20.61■□□□□ 0.89
SMG5-204ENST00000476954 FXR1P51114 621 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMG5-204ENST00000476954 PKN2Q16513 984 aaKnown RBP20.6■□□□□ 0.89
SMG5-204ENST00000476954 ZNF34Q8IZ26 560 aa20.6■□□□□ 0.89
SMG5-204ENST00000476954 ASTN2O75129 1339 aaPredicted RBP20.59■□□□□ 0.89
SMG5-204ENST00000476954 PSMD14O00487 310 aa20.59■□□□□ 0.89
SMG5-204ENST00000476954 PRKAR2BP31323 418 aa20.59■□□□□ 0.89
SMG5-204ENST00000476954 CC2D1BQ5T0F9 858 aaKnown RBP20.59■□□□□ 0.89
SMG5-204ENST00000476954 DCPSQ96C86 337 aaKnown RBP20.59■□□□□ 0.89
SMG5-204ENST00000476954 MIS18AQ9NYP9 233 aa20.59■□□□□ 0.89
SMG5-204ENST00000476954 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
SMG5-204ENST00000476954 SP8Q8IXZ3 490 aa20.58■□□□□ 0.89
SMG5-204ENST00000476954 NLRP3Q96P20 1036 aa20.58■□□□□ 0.89
SMG5-204ENST00000476954 EIF4G2P78344 907 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMG5-204ENST00000476954 KIF6Q6ZMV9 814 aa20.57■□□□□ 0.88
SMG5-204ENST00000476954 DPF2Q92785 391 aa20.57■□□□□ 0.88
SMG5-204ENST00000476954 CDCA5Q96FF9 252 aa20.57■□□□□ 0.88
SMG5-204ENST00000476954 MYL6BP14649 208 aa20.56■□□□□ 0.88
SMG5-204ENST00000476954 FBXO46Q6PJ61 603 aaPredicted RBP20.56■□□□□ 0.88
SMG5-204ENST00000476954 KCNQ5Q9NR82 932 aa20.56■□□□□ 0.88
SMG5-204ENST00000476954 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
SMG5-204ENST00000476954 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
SMG5-204ENST00000476954 DBNDD1Q9H9R9 158 aa20.55■□□□□ 0.88
SMG5-204ENST00000476954 GGA3Q9NZ52 723 aa20.55■□□□□ 0.88
SMG5-204ENST00000476954 ANKRD36CQ5JPF3 1778 aa20.54■□□□□ 0.88
SMG5-204ENST00000476954 MOB2Q70IA6 237 aa20.54■□□□□ 0.88
SMG5-204ENST00000476954 POTEFA5A3E0 1075 aa20.53■□□□□ 0.88
SMG5-204ENST00000476954 BBOX1O75936 387 aa20.53■□□□□ 0.88
SMG5-204ENST00000476954 SLC10A5Q5PT55 438 aa20.53■□□□□ 0.88
SMG5-204ENST00000476954 TRIOBPQ9H2D6 2365 aa20.53■□□□□ 0.88
SMG5-204ENST00000476954 KIAA0100Q14667 2235 aaKnown RBP20.53■□□□□ 0.88
SMG5-204ENST00000476954 CEP290O15078 2479 aa20.52■□□□□ 0.88
SMG5-204ENST00000476954 PAPPA2Q9BXP8 1791 aa20.52■□□□□ 0.88
SMG5-204ENST00000476954 GPR25O00155 361 aa20.52■□□□□ 0.88
SMG5-204ENST00000476954 KIF4BQ2VIQ3 1234 aa20.52■□□□□ 0.88
SMG5-204ENST00000476954 PPP1R42Q7Z4L9 355 aa20.52■□□□□ 0.88
SMG5-204ENST00000476954 SULF1Q8IWU6 871 aa20.52■□□□□ 0.88
SMG5-204ENST00000476954 REM2Q8IYK8 340 aaPredicted RBP20.52■□□□□ 0.88
SMG5-204ENST00000476954 RTF1Q92541 710 aaKnown RBP20.52■□□□□ 0.88
SMG5-204ENST00000476954 R3HDMLQ9H3Y0 253 aa20.52■□□□□ 0.88
SMG5-204ENST00000476954 LRRC37AA6NMS7 1700 aa20.52■□□□□ 0.88
SMG5-204ENST00000476954 SCN9AQ15858 1988 aa20.52■□□□□ 0.87
SMG5-204ENST00000476954 RTL9Q8NET4 1388 aa20.51■□□□□ 0.87
SMG5-204ENST00000476954 RIMBP2O15034 1052 aa20.51■□□□□ 0.87
SMG5-204ENST00000476954 HCLS1P14317 486 aaPredicted RBP20.51■□□□□ 0.87
SMG5-204ENST00000476954 GIGYF2Q6Y7W6 1299 aaKnown RBP20.51■□□□□ 0.87
SMG5-204ENST00000476954 KDM3BQ7LBC6 1761 aa20.51■□□□□ 0.87
SMG5-204ENST00000476954 UTP14AQ9BVJ6 771 aaKnown RBP20.5■□□□□ 0.87
SMG5-204ENST00000476954 PER1O15534 1290 aaPredicted RBP20.49■□□□□ 0.87
SMG5-204ENST00000476954 TAF7Q15545 349 aaPredicted RBP20.49■□□□□ 0.87
SMG5-204ENST00000476954 SCAF8Q9UPN6 1271 aaKnown RBP20.49■□□□□ 0.87
SMG5-204ENST00000476954 COL4A1P02462 1669 aa20.48■□□□□ 0.87
SMG5-204ENST00000476954 UBE2Q2LH0YL09 131 aa20.48■□□□□ 0.87
SMG5-204ENST00000476954 GRAPQ13588 217 aa20.48■□□□□ 0.87
SMG5-204ENST00000476954 DOK7Q18PE1 504 aa20.48■□□□□ 0.87
SMG5-204ENST00000476954 WASHC4Q2M389 1173 aa20.48■□□□□ 0.87
SMG5-204ENST00000476954 PARP10Q53GL7 1025 aa20.48■□□□□ 0.87
SMG5-204ENST00000476954 GRAPLQ8TC17 118 aaPredicted RBP20.48■□□□□ 0.87
SMG5-204ENST00000476954 RPS12P25398 132 aaKnown RBP20.47■□□□□ 0.87
SMG5-204ENST00000476954 MKRN3Q13064 507 aaKnown RBP20.47■□□□□ 0.87
SMG5-204ENST00000476954 ANGEL2Q5VTE6 544 aaKnown RBP20.47■□□□□ 0.87
SMG5-204ENST00000476954 DDX46Q7L014 1031 aaKnown RBP20.47■□□□□ 0.87
SMG5-204ENST00000476954 THUMPD2Q9BTF0 503 aaKnown RBP20.47■□□□□ 0.87
SMG5-204ENST00000476954 ECE2O60344 883 aa20.46■□□□□ 0.87
SMG5-204ENST00000476954 ZNF428Q96B54 188 aa20.46■□□□□ 0.87
SMG5-204ENST00000476954 COLQQ9Y215 455 aaPredicted RBP20.46■□□□□ 0.87
SMG5-204ENST00000476954 DDX60Q8IY21 1712 aaKnown RBP20.46■□□□□ 0.87
SMG5-204ENST00000476954 RBBP6Q7Z6E9 1792 aaKnown RBP20.46■□□□□ 0.87
SMG5-204ENST00000476954 MKI67P46013 3256 aaKnown RBP20.45■□□□□ 0.86
SMG5-204ENST00000476954 FKTNO75072 461 aa20.45■□□□□ 0.86
SMG5-204ENST00000476954 POLLQ9UGP5 575 aa20.45■□□□□ 0.86
SMG5-204ENST00000476954 TM4SF4P48230 202 aa20.44■□□□□ 0.86
SMG5-204ENST00000476954 SCARF1Q14162 830 aa20.44■□□□□ 0.86
SMG5-204ENST00000476954 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
SMG5-204ENST00000476954 PRAMEF18Q5VWM3 479 aa20.44■□□□□ 0.86
SMG5-204ENST00000476954 TIMELESSQ9UNS1 1208 aa20.44■□□□□ 0.86
SMG5-204ENST00000476954 NSFL1CQ9UNZ2 370 aaKnown RBP20.44■□□□□ 0.86
SMG5-204ENST00000476954 C6orf229H3BNL8 230 aa20.43■□□□□ 0.86
SMG5-204ENST00000476954 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
SMG5-204ENST00000476954 FKBP1BP68106 108 aa20.43■□□□□ 0.86
SMG5-204ENST00000476954 DLG5Q8TDM6 1919 aa20.43■□□□□ 0.86
SMG5-204ENST00000476954 GPSM2P81274 684 aa20.42■□□□□ 0.86
SMG5-204ENST00000476954 LRP10Q7Z4F1 713 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms