RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 FBXO18Q8NFZ0 1043 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 PSD3Q9NYI0 1048 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 RAI14Q9P0K7 980 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 HECW2Q9P2P5 1572 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 OAS2P29728 719 aaKnown RBP12.34□□□□□ -0.43
ABCF1-205ENST00000475993 KCNJ6P48051 423 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 LRCH2Q5VUJ6 765 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 REXO1L1PQ8IX06 675 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 TM6SF1Q9BZW5 370 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 TBC1D8O95759 1140 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 ADRA2BP18089 450 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 PDCP20941 246 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 MNS1Q8NEH6 495 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 UBXN4Q92575 508 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 CALR3Q96L12 384 aaKnown RBP12.34□□□□□ -0.43
ABCF1-205ENST00000475993 MED4Q9NPJ6 270 aa12.34□□□□□ -0.43
ABCF1-205ENST00000475993 RRP15Q9Y3B9 282 aaKnown RBP12.34□□□□□ -0.43
ABCF1-205ENST00000475993 SASH3O75995 380 aa12.33□□□□□ -0.44
ABCF1-205ENST00000475993 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
ABCF1-205ENST00000475993 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
ABCF1-205ENST00000475993 SETD1AO15047 1707 aaKnown RBP12.33□□□□□ -0.44
ABCF1-205ENST00000475993 F6X3S4 739 aa12.33□□□□□ -0.44
ABCF1-205ENST00000475993 SLC4A10Q6U841 1118 aa12.33□□□□□ -0.44
ABCF1-205ENST00000475993 PI4K2BQ8TCG2 481 aa12.33□□□□□ -0.44
ABCF1-205ENST00000475993 KCNB2Q92953 911 aa12.33□□□□□ -0.44
ABCF1-205ENST00000475993 IMPACTQ9P2X3 320 aa12.33□□□□□ -0.44
ABCF1-205ENST00000475993 TFIP11Q9UBB9 837 aaKnown RBP12.33□□□□□ -0.44
ABCF1-205ENST00000475993 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
ABCF1-205ENST00000475993 NPATQ14207 1427 aa12.33□□□□□ -0.44
ABCF1-205ENST00000475993 CHD2O14647 1828 aaKnown RBP12.32□□□□□ -0.44
ABCF1-205ENST00000475993 NEXMIFQ5QGS0 1516 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 PTPRMP28827 1452 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 TADA3O75528 432 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 SEC31AO94979 1220 aaKnown RBP12.32□□□□□ -0.44
ABCF1-205ENST00000475993 GNAI3P08754 354 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 BIRC2Q13490 618 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 SMC1AQ14683 1233 aaKnown RBP12.32□□□□□ -0.44
ABCF1-205ENST00000475993 PPP2R5AQ15172 486 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 STX1AQ16623 288 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 ADCK5Q3MIX3 580 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 DHX40Q8IX18 779 aaKnown RBP12.32□□□□□ -0.44
ABCF1-205ENST00000475993 NECAB1Q8N987 351 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 EMILIN1Q9Y6C2 1016 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 TPM1P09493 284 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 NBPF11Q86T75 865 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 BICD2Q8TD16 824 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 AK7Q96M32 723 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 JAKMIP1Q96N16 626 aaKnown RBP12.32□□□□□ -0.44
ABCF1-205ENST00000475993 SRRTQ9BXP5 876 aaKnown RBP12.32□□□□□ -0.44
ABCF1-205ENST00000475993 CYP46A1Q9Y6A2 500 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 PHLPP2Q6ZVD8 1323 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
ABCF1-205ENST00000475993 G2E3Q7L622 706 aa12.32□□□□□ -0.44
ABCF1-205ENST00000475993 ADCY9O60503 1353 aa12.31□□□□□ -0.44
ABCF1-205ENST00000475993 EFCAB8A8MWE9 144 aa12.31□□□□□ -0.44
ABCF1-205ENST00000475993 MAP4K4O95819 1239 aaPredicted RBP12.31□□□□□ -0.44
ABCF1-205ENST00000475993 CC2D1AQ6P1N0 951 aaPredicted RBP12.31□□□□□ -0.44
ABCF1-205ENST00000475993 TPCN1Q9ULQ1 816 aa12.31□□□□□ -0.44
ABCF1-205ENST00000475993 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
ABCF1-205ENST00000475993 BECN2A8MW95 431 aa12.31□□□□□ -0.44
ABCF1-205ENST00000475993 ATP6V1AP38606 617 aa12.31□□□□□ -0.44
ABCF1-205ENST00000475993 GSCP56915 257 aaPredicted RBP12.31□□□□□ -0.44
ABCF1-205ENST00000475993 ETF1P62495 437 aaKnown RBP12.31□□□□□ -0.44
ABCF1-205ENST00000475993 NOM1Q5C9Z4 860 aaKnown RBP12.31□□□□□ -0.44
ABCF1-205ENST00000475993 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
ABCF1-205ENST00000475993 PIK3C2BO00750 1634 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 CTAGE5O15320 804 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 CLSTN1O94985 981 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 MAP2K2P36507 400 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 CCDC150Q8NCX0 1101 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
ABCF1-205ENST00000475993 CABP1Q9NZU7 370 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 MINK1Q8N4C8 1332 aaPredicted RBP12.3□□□□□ -0.44
ABCF1-205ENST00000475993 ACTN2P35609 894 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
ABCF1-205ENST00000475993 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 ADAM21Q9UKJ8 722 aa12.3□□□□□ -0.44
ABCF1-205ENST00000475993 ARMCX5Q6P1M9 558 aa12.29□□□□□ -0.44
ABCF1-205ENST00000475993 RPAINQ86UA6 219 aa12.29□□□□□ -0.44
ABCF1-205ENST00000475993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.29□□□□□ -0.44
ABCF1-205ENST00000475993 PRAM1Q96QH2 718 aa12.29□□□□□ -0.44
ABCF1-205ENST00000475993 CFAP65Q6ZU64 1925 aaKnown RBP12.29□□□□□ -0.44
ABCF1-205ENST00000475993 SOS1Q07889 1333 aaPredicted RBP12.29□□□□□ -0.44
ABCF1-205ENST00000475993 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
ABCF1-205ENST00000475993 ANKRD20A12PQ8NF67 263 aa12.29□□□□□ -0.44
ABCF1-205ENST00000475993 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
ABCF1-205ENST00000475993 PTH1RQ03431 593 aa12.28□□□□□ -0.44
ABCF1-205ENST00000475993 GORABQ5T7V8 394 aa12.28□□□□□ -0.44
ABCF1-205ENST00000475993 LARP1Q6PKG0 1096 aaKnown RBP12.28□□□□□ -0.44
ABCF1-205ENST00000475993 ATP7BP35670 1465 aa12.28□□□□□ -0.44
ABCF1-205ENST00000475993 TTC41PQ6P2S7 1318 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms