RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 GLTPD2A6NH11 291 aa19.14■□□□□ 0.65
SNX13-207ENST00000475800 HOXA10P31260 410 aaPredicted RBP19.14■□□□□ 0.65
SNX13-207ENST00000475800 SYNE4Q8N205 404 aa19.14■□□□□ 0.65
SNX13-207ENST00000475800 DNAJC5GQ8N7S2 189 aa19.14■□□□□ 0.65
SNX13-207ENST00000475800 RBM17Q96I25 401 aaKnown RBP19.14■□□□□ 0.65
SNX13-207ENST00000475800 TIAM2Q8IVF5 1701 aa19.14■□□□□ 0.65
SNX13-207ENST00000475800 WDR90Q96KV7 1748 aa19.14■□□□□ 0.65
SNX13-207ENST00000475800 SLX4Q8IY92 1834 aa19.14■□□□□ 0.65
SNX13-207ENST00000475800 H7C1W4 665 aa19.13■□□□□ 0.65
SNX13-207ENST00000475800 PDE8AO60658 829 aa19.13■□□□□ 0.65
SNX13-207ENST00000475800 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
SNX13-207ENST00000475800 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
SNX13-207ENST00000475800 CRAMP1Q96RY5 1269 aa19.13■□□□□ 0.65
SNX13-207ENST00000475800 FSTL1Q12841 308 aa19.12■□□□□ 0.65
SNX13-207ENST00000475800 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
SNX13-207ENST00000475800 SOGA3Q5TF21 947 aa19.12■□□□□ 0.65
SNX13-207ENST00000475800 UBE3BQ7Z3V4 1068 aa19.12■□□□□ 0.65
SNX13-207ENST00000475800 BCAR3O75815 825 aa19.11■□□□□ 0.65
SNX13-207ENST00000475800 VEGFAP15692 232 aaPredicted RBP19.11■□□□□ 0.65
SNX13-207ENST00000475800 CCT4P50991 539 aaKnown RBP19.11■□□□□ 0.65
SNX13-207ENST00000475800 PRPF40BQ6NWY9 871 aaKnown RBP19.11■□□□□ 0.65
SNX13-207ENST00000475800 DDX46Q7L014 1031 aaKnown RBP19.11■□□□□ 0.65
SNX13-207ENST00000475800 SMC1BQ8NDV3 1235 aa19.11■□□□□ 0.65
SNX13-207ENST00000475800 GRM8O00222 908 aa19.1■□□□□ 0.65
SNX13-207ENST00000475800 C3orf67Q6ZVT6 689 aa19.1■□□□□ 0.65
SNX13-207ENST00000475800 PLA2G12BQ9BX93 195 aa19.1■□□□□ 0.65
SNX13-207ENST00000475800 TAOK3Q9H2K8 898 aa19.1■□□□□ 0.65
SNX13-207ENST00000475800 C9orf78Q9NZ63 289 aaPredicted RBP19.1■□□□□ 0.65
SNX13-207ENST00000475800 CCDC152Q4G0S7 254 aa19.09■□□□□ 0.65
SNX13-207ENST00000475800 ZKSCAN2Q63HK3 967 aa19.09■□□□□ 0.65
SNX13-207ENST00000475800 ATF7IPQ6VMQ6 1270 aa19.09■□□□□ 0.65
SNX13-207ENST00000475800 FRAT1Q92837 279 aaPredicted RBP19.09■□□□□ 0.65
SNX13-207ENST00000475800 ZC3H4Q9UPT8 1303 aaKnown RBP19.08■□□□□ 0.65
SNX13-207ENST00000475800 CASP7P55210 303 aa19.08■□□□□ 0.64
SNX13-207ENST00000475800 DPY19L2Q6NUT2 758 aa19.08■□□□□ 0.64
SNX13-207ENST00000475800 OLFM4Q6UX06 510 aa19.08■□□□□ 0.64
SNX13-207ENST00000475800 FER1L6Q2WGJ9 1857 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 ABCC4O15439 1325 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 BBOX1O75936 387 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 CTSWP56202 376 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 GRAPQ13588 217 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 GRIPAP1Q4V328 841 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 TMC4Q7Z404 712 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 GRAPLQ8TC17 118 aaPredicted RBP19.07■□□□□ 0.64
SNX13-207ENST00000475800 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
SNX13-207ENST00000475800 KLRG1Q96E93 195 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 TMX4Q9H1E5 349 aaPredicted RBP19.07■□□□□ 0.64
SNX13-207ENST00000475800 RCAN3Q9UKA8 241 aa19.07■□□□□ 0.64
SNX13-207ENST00000475800 UTYO14607 1347 aa19.06■□□□□ 0.64
SNX13-207ENST00000475800 TRIM27P14373 513 aa19.06■□□□□ 0.64
SNX13-207ENST00000475800 HDAC5Q9UQL6 1122 aa19.06■□□□□ 0.64
SNX13-207ENST00000475800 RTL9Q8NET4 1388 aa19.06■□□□□ 0.64
SNX13-207ENST00000475800 TAF1P21675 1872 aa19.05■□□□□ 0.64
SNX13-207ENST00000475800 POTECB2RU33 542 aa19.05■□□□□ 0.64
SNX13-207ENST00000475800 DDNO94850 711 aaPredicted RBP19.05■□□□□ 0.64
SNX13-207ENST00000475800 CCDC93Q567U6 631 aa19.05■□□□□ 0.64
SNX13-207ENST00000475800 INTS3Q68E01 1043 aaKnown RBP19.05■□□□□ 0.64
SNX13-207ENST00000475800 C7orf43Q8WVR3 580 aa19.05■□□□□ 0.64
SNX13-207ENST00000475800 PPEF1O14829 653 aaPredicted RBP19.04■□□□□ 0.64
SNX13-207ENST00000475800 MS4A1P11836 297 aa19.04■□□□□ 0.64
SNX13-207ENST00000475800 RTKN2Q8IZC4 609 aa19.04■□□□□ 0.64
SNX13-207ENST00000475800 TTLL11Q8NHH1 800 aa19.04■□□□□ 0.64
SNX13-207ENST00000475800 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
SNX13-207ENST00000475800 CDC5LQ99459 802 aaKnown RBP19.03■□□□□ 0.64
SNX13-207ENST00000475800 ZNF277Q9NRM2 450 aaPredicted RBP19.03■□□□□ 0.64
SNX13-207ENST00000475800 DICER1Q9UPY3 1922 aaKnown RBP19.03■□□□□ 0.64
SNX13-207ENST00000475800 LTBP3Q9NS15 1303 aa19.02■□□□□ 0.64
SNX13-207ENST00000475800 CSF1RP07333 972 aa19.02■□□□□ 0.64
SNX13-207ENST00000475800 POTEIP0CG38 1075 aa19.02■□□□□ 0.64
SNX13-207ENST00000475800 POTEJP0CG39 1038 aa19.02■□□□□ 0.64
SNX13-207ENST00000475800 USP44Q9H0E7 712 aa19.02■□□□□ 0.64
SNX13-207ENST00000475800 ATP6V0A2Q9Y487 856 aa19.02■□□□□ 0.64
SNX13-207ENST00000475800 NBPF7P0C2Y1 421 aaPredicted RBP19.01■□□□□ 0.63
SNX13-207ENST00000475800 RPS8P62241 208 aaKnown RBP19.01■□□□□ 0.63
SNX13-207ENST00000475800 SP8Q8IXZ3 490 aa19.01■□□□□ 0.63
SNX13-207ENST00000475800 DZIP1LQ8IYY4 767 aaKnown RBP19.01■□□□□ 0.63
SNX13-207ENST00000475800 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.01■□□□□ 0.63
SNX13-207ENST00000475800 LRRC37AA6NMS7 1700 aa19■□□□□ 0.63
SNX13-207ENST00000475800 UBTFL1P0CB47 393 aaPredicted RBP19■□□□□ 0.63
SNX13-207ENST00000475800 ANKRD18AQ8IVF6 992 aa19■□□□□ 0.63
SNX13-207ENST00000475800 CLUAP1Q96AJ1 413 aa19■□□□□ 0.63
SNX13-207ENST00000475800 GNAI3P08754 354 aa18.99■□□□□ 0.63
SNX13-207ENST00000475800 FOXO4P98177 505 aa18.99■□□□□ 0.63
SNX13-207ENST00000475800 CELF1Q92879 486 aaKnown RBP18.99■□□□□ 0.63
SNX13-207ENST00000475800 SUCLG2Q96I99 432 aa18.99■□□□□ 0.63
SNX13-207ENST00000475800 CCDC85AQ96PX6 553 aaPredicted RBP18.99■□□□□ 0.63
SNX13-207ENST00000475800 GREM2Q9H772 168 aa18.99■□□□□ 0.63
SNX13-207ENST00000475800 SEC31BQ9NQW1 1179 aa18.99■□□□□ 0.63
SNX13-207ENST00000475800 PCNTO95613 3336 aa18.99■□□□□ 0.63
SNX13-207ENST00000475800 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNX13-207ENST00000475800 LMBR1LQ6UX01 489 aa18.98■□□□□ 0.63
SNX13-207ENST00000475800 PSMD1Q99460 953 aa18.98■□□□□ 0.63
SNX13-207ENST00000475800 SPEF2Q9C093 1822 aa18.97■□□□□ 0.63
SNX13-207ENST00000475800 ANKRD18BA2A2Z9 1011 aa18.97■□□□□ 0.63
SNX13-207ENST00000475800 ITGA6P23229 1130 aa18.97■□□□□ 0.63
SNX13-207ENST00000475800 IGHMBP2P38935 993 aaKnown RBP18.97■□□□□ 0.63
SNX13-207ENST00000475800 IFIT5Q13325 482 aaKnown RBP18.97■□□□□ 0.63
SNX13-207ENST00000475800 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
SNX13-207ENST00000475800 RABL6Q3YEC7 729 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms