RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 TNRC6CQ9HCJ0 1690 aaKnown RBP11.98□□□□□ -0.49
SMC4-213ENST00000472282 SNRPA1P09661 255 aaKnown RBP11.98□□□□□ -0.49
SMC4-213ENST00000472282 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
SMC4-213ENST00000472282 PRELPP51888 382 aa11.98□□□□□ -0.49
SMC4-213ENST00000472282 RASSF7Q02833 373 aa11.98□□□□□ -0.49
SMC4-213ENST00000472282 TAF7Q15545 349 aaPredicted RBP11.98□□□□□ -0.49
SMC4-213ENST00000472282 PRR5LQ6MZQ0 368 aa11.98□□□□□ -0.49
SMC4-213ENST00000472282 DZIP3Q86Y13 1208 aaKnown RBP11.98□□□□□ -0.49
SMC4-213ENST00000472282 C2CD5Q86YS7 1000 aa11.98□□□□□ -0.49
SMC4-213ENST00000472282 PTPREP23469 700 aa11.97□□□□□ -0.49
SMC4-213ENST00000472282 RIPK4P57078 832 aa11.97□□□□□ -0.49
SMC4-213ENST00000472282 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
SMC4-213ENST00000472282 C9orf131Q5VYM1 1079 aa11.97□□□□□ -0.49
SMC4-213ENST00000472282 APAF1O14727 1248 aa11.96□□□□□ -0.49
SMC4-213ENST00000472282 EVI5O60447 810 aa11.96□□□□□ -0.49
SMC4-213ENST00000472282 FOSBP53539 338 aa11.96□□□□□ -0.49
SMC4-213ENST00000472282 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
SMC4-213ENST00000472282 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
SMC4-213ENST00000472282 NMRK2Q9NPI5 230 aa11.96□□□□□ -0.49
SMC4-213ENST00000472282 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
SMC4-213ENST00000472282 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
SMC4-213ENST00000472282 RNF181Q9P0P0 153 aa11.95□□□□□ -0.5
SMC4-213ENST00000472282 VPS9D1Q9Y2B5 631 aa11.95□□□□□ -0.5
SMC4-213ENST00000472282 ANKRD36CQ5JPF3 1778 aa11.95□□□□□ -0.5
SMC4-213ENST00000472282 H0YIN7 160 aa11.94□□□□□ -0.5
SMC4-213ENST00000472282 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
SMC4-213ENST00000472282 MFSD10Q14728 455 aa11.94□□□□□ -0.5
SMC4-213ENST00000472282 HLFQ16534 295 aa11.94□□□□□ -0.5
SMC4-213ENST00000472282 TTLL6Q8N841 843 aa11.94□□□□□ -0.5
SMC4-213ENST00000472282 SETDB2Q96T68 719 aa11.94□□□□□ -0.5
SMC4-213ENST00000472282 NFKBIEO00221 500 aa11.93□□□□□ -0.5
SMC4-213ENST00000472282 CNBD1Q8NA66 436 aa11.93□□□□□ -0.5
SMC4-213ENST00000472282 ZNF622Q969S3 477 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■□□□□ 8.9
SMC4-213ENST00000472282 BRIP1Q9BX63 1249 aa11.93□□□□□ -0.5
SMC4-213ENST00000472282 LAMB2P55268 1798 aa11.92□□□□□ -0.5
SMC4-213ENST00000472282 WDR90Q96KV7 1748 aa11.92□□□□□ -0.5
SMC4-213ENST00000472282 NPM2Q86SE8 214 aaKnown RBP11.92□□□□□ -0.5
SMC4-213ENST00000472282 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
SMC4-213ENST00000472282 ZDHHC16Q969W1 377 aa11.92□□□□□ -0.5
SMC4-213ENST00000472282 FAM177BA6PVY3 158 aa11.91□□□□□ -0.5
SMC4-213ENST00000472282 C21orf2O43822 256 aa11.91□□□□□ -0.5
SMC4-213ENST00000472282 PDE6BP35913 854 aa11.91□□□□□ -0.5
SMC4-213ENST00000472282 CLEC4GQ6UXB4 293 aa11.91□□□□□ -0.5
SMC4-213ENST00000472282 TTLL7Q6ZT98 887 aa11.91□□□□□ -0.5
SMC4-213ENST00000472282 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.51e-7■■■■■ 83.2
SMC4-213ENST00000472282 SRGNP10124 158 aa11.9□□□□□ -0.5
SMC4-213ENST00000472282 MYL6BP14649 208 aa11.9□□□□□ -0.5
SMC4-213ENST00000472282 HSPA6P17066 643 aa11.9□□□□□ -0.5
SMC4-213ENST00000472282 NBPF5PQ86XG9 351 aaPredicted RBP11.9□□□□□ -0.5
SMC4-213ENST00000472282 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
SMC4-213ENST00000472282 TAF1P21675 1872 aa11.89□□□□□ -0.51
SMC4-213ENST00000472282 NPHP1O15259 732 aa11.89□□□□□ -0.51
SMC4-213ENST00000472282 ST5P78524 1137 aa11.89□□□□□ -0.51
SMC4-213ENST00000472282 RRAGCQ9HB90 399 aa11.89□□□□□ -0.51
SMC4-213ENST00000472282 TSPYL4Q9UJ04 414 aa11.89□□□□□ -0.51
SMC4-213ENST00000472282 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
SMC4-213ENST00000472282 ABCC12Q96J65 1359 aa11.89□□□□□ -0.51
SMC4-213ENST00000472282 GOLGA8CPA6NN73 597 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 TOMM70O94826 608 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 ANXA1P04083 346 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 LMNB1P20700 586 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 PDIA6Q15084 440 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 PROSER3Q2NL68 480 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 STYK1Q6J9G0 422 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 PRPF40BQ6NWY9 871 aaKnown RBP11.88□□□□□ -0.51
SMC4-213ENST00000472282 LRP10Q7Z4F1 713 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 ZBTB3Q9H5J0 574 aa11.88□□□□□ -0.51
SMC4-213ENST00000472282 MAP3K15Q6ZN16 1313 aa11.87□□□□□ -0.51
SMC4-213ENST00000472282 UBN2Q6ZU65 1347 aa11.87□□□□□ -0.51
SMC4-213ENST00000472282 GPTP24298 496 aa11.87□□□□□ -0.51
SMC4-213ENST00000472282 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
SMC4-213ENST00000472282 OLFM4Q6UX06 510 aa11.87□□□□□ -0.51
SMC4-213ENST00000472282 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
SMC4-213ENST00000472282 MASTLQ96GX5 879 aa11.87□□□□□ -0.51
SMC4-213ENST00000472282 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
SMC4-213ENST00000472282 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
SMC4-213ENST00000472282 KLRG2A4D1S0 409 aaPredicted RBP11.86□□□□□ -0.51
SMC4-213ENST00000472282 ERVV-1B6SEH8 477 aa11.86□□□□□ -0.51
SMC4-213ENST00000472282 EIF2S2P20042 333 aaKnown RBP11.86□□□□□ -0.51
SMC4-213ENST00000472282 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
SMC4-213ENST00000472282 SLC51AQ86UW1 340 aa11.86□□□□□ -0.51
SMC4-213ENST00000472282 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
SMC4-213ENST00000472282 C7orf43Q8WVR3 580 aa11.86□□□□□ -0.51
SMC4-213ENST00000472282 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
SMC4-213ENST00000472282 CNKSR1Q969H4 720 aa11.86□□□□□ -0.51
SMC4-213ENST00000472282 LAS1LQ9Y4W2 734 aaKnown RBP11.86□□□□□ -0.51
SMC4-213ENST00000472282 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
SMC4-213ENST00000472282 GLTPD2A6NH11 291 aa11.85□□□□□ -0.51
SMC4-213ENST00000472282 POTECB2RU33 542 aa11.85□□□□□ -0.51
SMC4-213ENST00000472282 CALD1Q05682 793 aaKnown RBP11.85□□□□□ -0.51
SMC4-213ENST00000472282 ERFEQ4G0M1 354 aa11.85□□□□□ -0.51
SMC4-213ENST00000472282 SUSD4Q5VX71 490 aa11.85□□□□□ -0.51
SMC4-213ENST00000472282 ZBED2Q9BTP6 218 aa11.85□□□□□ -0.51
SMC4-213ENST00000472282 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
SMC4-213ENST00000472282 SNED1Q8TER0 1413 aa11.85□□□□□ -0.51
SMC4-213ENST00000472282 ERBB4Q15303 1308 aa11.85□□□□□ -0.51
SMC4-213ENST00000472282 ZC3H4Q9UPT8 1303 aaKnown RBP11.85□□□□□ -0.51
SMC4-213ENST00000472282 CHL1O00533 1208 aa11.84□□□□□ -0.51
SMC4-213ENST00000472282 NPR1P16066 1061 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms