RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-208ENST00000471308 ALDH8A1Q9H2A2 487 aaPredicted RBP20.26■□□□□ 0.83
PCBP4-208ENST00000471308 TSGA10IPQ3SY00 556 aa20.26■□□□□ 0.83
PCBP4-208ENST00000471308 GPR108Q9NPR9 543 aa20.26■□□□□ 0.83
PCBP4-208ENST00000471308 RBM27Q9P2N5 1060 aaKnown RBP20.26■□□□□ 0.83
PCBP4-208ENST00000471308 SPEF2Q9C093 1822 aa20.26■□□□□ 0.83
PCBP4-208ENST00000471308 SYT1P21579 422 aa20.25■□□□□ 0.83
PCBP4-208ENST00000471308 TTLL7Q6ZT98 887 aa20.25■□□□□ 0.83
PCBP4-208ENST00000471308 HAUS7Q99871 368 aa20.25■□□□□ 0.83
PCBP4-208ENST00000471308 LARGE1O95461 756 aa20.25■□□□□ 0.83
PCBP4-208ENST00000471308 CCDC83Q8IWF9 413 aa20.25■□□□□ 0.83
PCBP4-208ENST00000471308 KRT32Q14532 448 aa20.24■□□□□ 0.83
PCBP4-208ENST00000471308 USPL1Q5W0Q7 1092 aa20.24■□□□□ 0.83
PCBP4-208ENST00000471308 BLOC1S2Q6QNY1 142 aa20.24■□□□□ 0.83
PCBP4-208ENST00000471308 ATG3Q9NT62 314 aa20.24■□□□□ 0.83
PCBP4-208ENST00000471308 TAF5LO75529 589 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 PHF14O94880 888 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 F13A1P00488 732 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 A1BGP04217 495 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 DBNDD2Q9BQY9 259 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 NSFL1CQ9UNZ2 370 aaKnown RBP20.23■□□□□ 0.83
PCBP4-208ENST00000471308 GJB2P29033 226 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 CLCN1P35523 988 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 IL15P40933 162 aaPredicted RBP20.23■□□□□ 0.83
PCBP4-208ENST00000471308 PRIM1P49642 420 aaKnown RBP20.23■□□□□ 0.83
PCBP4-208ENST00000471308 EVA1CP58658 441 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 ZNF589Q86UQ0 364 aaPredicted RBP20.23■□□□□ 0.83
PCBP4-208ENST00000471308 DDX54Q8TDD1 881 aaKnown RBP20.23■□□□□ 0.83
PCBP4-208ENST00000471308 CHMP3Q9Y3E7 222 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 PALLDQ8WX93 1383 aa20.23■□□□□ 0.83
PCBP4-208ENST00000471308 LARP6Q9BRS8 491 aaKnown RBP20.22■□□□□ 0.83
PCBP4-208ENST00000471308 ZNF335Q9H4Z2 1342 aaPredicted RBP20.22■□□□□ 0.83
PCBP4-208ENST00000471308 SYCE3A1L190 88 aa20.22■□□□□ 0.83
PCBP4-208ENST00000471308 RPS6KB1P23443 525 aa20.22■□□□□ 0.83
PCBP4-208ENST00000471308 ME3Q16798 604 aa20.22■□□□□ 0.83
PCBP4-208ENST00000471308 CSPP1Q1MSJ5 1256 aa20.22■□□□□ 0.83
PCBP4-208ENST00000471308 USP48Q86UV5 1035 aa20.22■□□□□ 0.83
PCBP4-208ENST00000471308 DNAJC2Q99543 621 aaKnown RBP20.22■□□□□ 0.83
PCBP4-208ENST00000471308 STRN4Q9NRL3 753 aa20.22■□□□□ 0.83
PCBP4-208ENST00000471308 ZNF609O15014 1411 aa20.22■□□□□ 0.83
PCBP4-208ENST00000471308 SH3TC1Q8TE82 1336 aa20.21■□□□□ 0.83
PCBP4-208ENST00000471308 ATG9AQ7Z3C6 839 aa20.21■□□□□ 0.83
PCBP4-208ENST00000471308 EDC3Q96F86 508 aaKnown RBP20.21■□□□□ 0.83
PCBP4-208ENST00000471308 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
PCBP4-208ENST00000471308 RBSNQ9H1K0 784 aa20.21■□□□□ 0.83
PCBP4-208ENST00000471308 ZBTB3Q9H5J0 574 aa20.21■□□□□ 0.83
PCBP4-208ENST00000471308 TMOD3Q9NYL9 352 aa20.21■□□□□ 0.83
PCBP4-208ENST00000471308 U3KPZ7 1027 aaPredicted RBP20.21■□□□□ 0.83
PCBP4-208ENST00000471308 ESPNB1AK53 854 aa20.2■□□□□ 0.82
PCBP4-208ENST00000471308 CIAO1O76071 339 aa20.2■□□□□ 0.82
PCBP4-208ENST00000471308 KBTBD3Q8NAB2 608 aa20.2■□□□□ 0.82
PCBP4-208ENST00000471308 ITGB4P16144 1822 aa20.2■□□□□ 0.82
PCBP4-208ENST00000471308 MCMDC2Q4G0Z9 681 aa20.2■□□□□ 0.82
PCBP4-208ENST00000471308 VSIG10Q8N0Z9 540 aa20.2■□□□□ 0.82
PCBP4-208ENST00000471308 TPCN1Q9ULQ1 816 aa20.2■□□□□ 0.82
PCBP4-208ENST00000471308 EYA2O00167 538 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 ST3GAL1Q11201 340 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 ISCA1Q9BUE6 129 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 PLCH1Q4KWH8 1693 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 PDCP20941 246 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 UBE2HP62256 183 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 FOXD4L6Q3SYB3 417 aaPredicted RBP20.18■□□□□ 0.82
PCBP4-208ENST00000471308 FOXD4L3Q6VB84 417 aaPredicted RBP20.18■□□□□ 0.82
PCBP4-208ENST00000471308 KLHL34Q8N239 644 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 FBXO3Q9UK99 471 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 MTMR6Q9Y217 621 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 CNPY2Q9Y2B0 182 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 LRP6O75581 1613 aa20.18■□□□□ 0.82
PCBP4-208ENST00000471308 GDPD2Q9HCC8 539 aa20.17■□□□□ 0.82
PCBP4-208ENST00000471308 COL14A1Q05707 1796 aaKnown RBP20.17■□□□□ 0.82
PCBP4-208ENST00000471308 TRIM28Q13263 835 aaKnown RBP20.17■□□□□ 0.82
PCBP4-208ENST00000471308 TCIRG1Q13488 830 aa20.17■□□□□ 0.82
PCBP4-208ENST00000471308 PAG1Q9NWQ8 432 aa20.17■□□□□ 0.82
PCBP4-208ENST00000471308 GADD45BO75293 160 aaPredicted RBP20.16■□□□□ 0.82
PCBP4-208ENST00000471308 DDX46Q7L014 1031 aaKnown RBP20.16■□□□□ 0.82
PCBP4-208ENST00000471308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.16■□□□□ 0.82
PCBP4-208ENST00000471308 NEUROD6Q96NK8 337 aa20.16■□□□□ 0.82
PCBP4-208ENST00000471308 TSPY26PQ9H489 355 aa20.16■□□□□ 0.82
PCBP4-208ENST00000471308 HELLSQ9NRZ9 838 aa20.16■□□□□ 0.82
PCBP4-208ENST00000471308 TOB2Q14106 344 aaPredicted RBP20.15■□□□□ 0.82
PCBP4-208ENST00000471308 HS1BP3Q53T59 392 aa20.15■□□□□ 0.82
PCBP4-208ENST00000471308 KIF6Q6ZMV9 814 aa20.15■□□□□ 0.82
PCBP4-208ENST00000471308 PDLIM2Q96JY6 352 aa20.15■□□□□ 0.82
PCBP4-208ENST00000471308 ANKRD36CQ5JPF3 1778 aa20.15■□□□□ 0.82
PCBP4-208ENST00000471308 LETM1O95202 739 aaPredicted RBP20.15■□□□□ 0.82
PCBP4-208ENST00000471308 NEK1Q96PY6 1258 aa20.15■□□□□ 0.82
PCBP4-208ENST00000471308 LAMA4Q16363 1823 aa20.15■□□□□ 0.82
PCBP4-208ENST00000471308 CCDC183Q5T5S1 534 aa20.14■□□□□ 0.81
PCBP4-208ENST00000471308 NECAB1Q8N987 351 aa20.14■□□□□ 0.81
PCBP4-208ENST00000471308 NDUFB9Q9Y6M9 179 aa20.14■□□□□ 0.81
PCBP4-208ENST00000471308 VPS37CA5D8V6 355 aaPredicted RBP20.14■□□□□ 0.81
PCBP4-208ENST00000471308 PLA2G12BQ9BX93 195 aa20.14■□□□□ 0.81
PCBP4-208ENST00000471308 STARD3NLO95772 234 aa20.13■□□□□ 0.81
PCBP4-208ENST00000471308 HMGB1P09429 215 aaKnown RBP20.13■□□□□ 0.81
PCBP4-208ENST00000471308 CCDC57Q2TAC2 916 aa20.13■□□□□ 0.81
PCBP4-208ENST00000471308 LARP1BQ659C4 914 aaKnown RBP20.13■□□□□ 0.81
PCBP4-208ENST00000471308 DSCC1Q9BVC3 393 aa20.13■□□□□ 0.81
PCBP4-208ENST00000471308 TAF6LQ9Y6J9 622 aa20.13■□□□□ 0.81
PCBP4-208ENST00000471308 WNK3Q9BYP7 1800 aa20.13■□□□□ 0.81
PCBP4-208ENST00000471308 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.13■□□□□ 0.81
PCBP4-208ENST00000471308 DISP2A7MBM2 1401 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms