RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 MPNDQ8N594 471 aa19.21■□□□□ 0.67
MCF2L-220ENST00000464800 BCL2L13Q9BXK5 485 aa19.21■□□□□ 0.67
MCF2L-220ENST00000464800 DUOX1Q9NRD9 1551 aa19.2■□□□□ 0.66
MCF2L-220ENST00000464800 ANXA1P04083 346 aa19.2■□□□□ 0.66
MCF2L-220ENST00000464800 HSP90AB3PQ58FF7 597 aa19.2■□□□□ 0.66
MCF2L-220ENST00000464800 HHIPL1Q96JK4 782 aa19.2■□□□□ 0.66
MCF2L-220ENST00000464800 GLIS2Q9BZE0 524 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-220ENST00000464800 TSKSQ9UJT2 592 aa19.2■□□□□ 0.66
MCF2L-220ENST00000464800 DDX60Q8IY21 1712 aaKnown RBP19.2■□□□□ 0.66
MCF2L-220ENST00000464800 CCDC85CA6NKD9 419 aa19.19■□□□□ 0.66
MCF2L-220ENST00000464800 CA12O43570 354 aa19.19■□□□□ 0.66
MCF2L-220ENST00000464800 HCLS1P14317 486 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-220ENST00000464800 TNIP1Q15025 636 aa19.19■□□□□ 0.66
MCF2L-220ENST00000464800 DDX46Q7L014 1031 aaKnown RBP19.19■□□□□ 0.66
MCF2L-220ENST00000464800 PGAP2Q9UHJ9 254 aa19.19■□□□□ 0.66
MCF2L-220ENST00000464800 RAD17O75943 681 aa19.18■□□□□ 0.66
MCF2L-220ENST00000464800 NLRP10Q86W26 655 aa19.18■□□□□ 0.66
MCF2L-220ENST00000464800 ZC3H15Q8WU90 426 aaKnown RBP19.18■□□□□ 0.66
MCF2L-220ENST00000464800 ZNF408Q9H9D4 720 aa19.18■□□□□ 0.66
MCF2L-220ENST00000464800 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
MCF2L-220ENST00000464800 BRPF1P55201 1214 aaPredicted RBP19.17■□□□□ 0.66
MCF2L-220ENST00000464800 RIPK4P57078 832 aa19.17■□□□□ 0.66
MCF2L-220ENST00000464800 AIMP1Q12904 312 aaKnown RBP19.17■□□□□ 0.66
MCF2L-220ENST00000464800 GRAPQ13588 217 aa19.17■□□□□ 0.66
MCF2L-220ENST00000464800 COPS6Q7L5N1 327 aa19.17■□□□□ 0.66
MCF2L-220ENST00000464800 GRAPLQ8TC17 118 aaPredicted RBP19.17■□□□□ 0.66
MCF2L-220ENST00000464800 TRMT112Q9UI30 125 aaKnown RBP19.17■□□□□ 0.66
MCF2L-220ENST00000464800 SH3TC1Q8TE82 1336 aa19.17■□□□□ 0.66
MCF2L-220ENST00000464800 CASP8AP2Q9UKL3 1982 aa19.17■□□□□ 0.66
MCF2L-220ENST00000464800 LMOD3Q0VAK6 560 aa19.16■□□□□ 0.66
MCF2L-220ENST00000464800 CDC37L1Q7L3B6 337 aa19.16■□□□□ 0.66
MCF2L-220ENST00000464800 TMC4Q7Z404 712 aa19.16■□□□□ 0.66
MCF2L-220ENST00000464800 TRPM4Q8TD43 1214 aa19.16■□□□□ 0.66
MCF2L-220ENST00000464800 XAGE3Q8WTP9 111 aa19.16■□□□□ 0.66
MCF2L-220ENST00000464800 NECTIN2Q92692 538 aa19.16■□□□□ 0.66
MCF2L-220ENST00000464800 HIRAP54198 1017 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-220ENST00000464800 MLLT1Q03111 559 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-220ENST00000464800 TCIRG1Q13488 830 aa19.15■□□□□ 0.66
MCF2L-220ENST00000464800 CNOT7Q9UIV1 285 aaKnown RBP19.15■□□□□ 0.66
MCF2L-220ENST00000464800 YDJCA8MPS7 323 aa19.14■□□□□ 0.65
MCF2L-220ENST00000464800 H7C1D1 291 aa19.14■□□□□ 0.65
MCF2L-220ENST00000464800 MICALL2Q8IY33 904 aa19.14■□□□□ 0.65
MCF2L-220ENST00000464800 SHTN1A0MZ66 631 aa19.13■□□□□ 0.65
MCF2L-220ENST00000464800 SLC34A2O95436 690 aa19.13■□□□□ 0.65
MCF2L-220ENST00000464800 RGS19P49795 217 aa19.12■□□□□ 0.65
MCF2L-220ENST00000464800 NOGQ13253 232 aa19.12■□□□□ 0.65
MCF2L-220ENST00000464800 MCOLN1Q9GZU1 580 aa19.12■□□□□ 0.65
MCF2L-220ENST00000464800 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
MCF2L-220ENST00000464800 POLR2AP24928 1970 aaKnown RBP19.11■□□□□ 0.65
MCF2L-220ENST00000464800 HUNKP57058 714 aa19.1■□□□□ 0.65
MCF2L-220ENST00000464800 WASHC4Q2M389 1173 aa19.1■□□□□ 0.65
MCF2L-220ENST00000464800 USP48Q86UV5 1035 aa19.1■□□□□ 0.65
MCF2L-220ENST00000464800 DPF2Q92785 391 aa19.1■□□□□ 0.65
MCF2L-220ENST00000464800 ZNF428Q96B54 188 aa19.1■□□□□ 0.65
MCF2L-220ENST00000464800 CFAP44Q96MT7 982 aa19.1■□□□□ 0.65
MCF2L-220ENST00000464800 CHPF2Q9P2E5 772 aa19.1■□□□□ 0.65
MCF2L-220ENST00000464800 ZBTB12Q9Y330 459 aaPredicted RBP19.1■□□□□ 0.65
MCF2L-220ENST00000464800 COL4A1P02462 1669 aa19.09■□□□□ 0.65
MCF2L-220ENST00000464800 PSMD14O00487 310 aa19.09■□□□□ 0.65
MCF2L-220ENST00000464800 DBNDD1Q9H9R9 158 aa19.09■□□□□ 0.65
MCF2L-220ENST00000464800 NSFL1CQ9UNZ2 370 aaKnown RBP19.09■□□□□ 0.65
MCF2L-220ENST00000464800 DGKZQ13574 1117 aa19.08■□□□□ 0.64
MCF2L-220ENST00000464800 KRT24Q2M2I5 525 aa19.08■□□□□ 0.64
MCF2L-220ENST00000464800 SAMD7Q7Z3H4 446 aa19.08■□□□□ 0.64
MCF2L-220ENST00000464800 KRT26Q7Z3Y9 468 aa19.08■□□□□ 0.64
MCF2L-220ENST00000464800 PLBD2Q8NHP8 589 aa19.08■□□□□ 0.64
MCF2L-220ENST00000464800 C6orf229H3BNL8 230 aa19.07■□□□□ 0.64
MCF2L-220ENST00000464800 RIMBP2O15034 1052 aa19.07■□□□□ 0.64
MCF2L-220ENST00000464800 RPS12P25398 132 aaKnown RBP19.07■□□□□ 0.64
MCF2L-220ENST00000464800 TBC1D10BQ4KMP7 808 aaPredicted RBP19.07■□□□□ 0.64
MCF2L-220ENST00000464800 HDGFL1Q5TGJ6 251 aa19.07■□□□□ 0.64
MCF2L-220ENST00000464800 CELF1Q92879 486 aaKnown RBP19.07■□□□□ 0.64
MCF2L-220ENST00000464800 AKAP11Q9UKA4 1901 aa19.07■□□□□ 0.64
MCF2L-220ENST00000464800 SCN9AQ15858 1988 aa19.06■□□□□ 0.64
MCF2L-220ENST00000464800 CHL1O00533 1208 aa19.06■□□□□ 0.64
MCF2L-220ENST00000464800 ECE2O60344 883 aa19.06■□□□□ 0.64
MCF2L-220ENST00000464800 SF3B3Q15393 1217 aaKnown RBP19.06■□□□□ 0.64
MCF2L-220ENST00000464800 DCPSQ96C86 337 aaKnown RBP19.06■□□□□ 0.64
MCF2L-220ENST00000464800 FAM89AQ96GI7 184 aa19.06■□□□□ 0.64
MCF2L-220ENST00000464800 ZIC5Q96T25 663 aa19.06■□□□□ 0.64
MCF2L-220ENST00000464800 EYA3Q99504 573 aa19.06■□□□□ 0.64
MCF2L-220ENST00000464800 GBA2Q9HCG7 927 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-220ENST00000464800 LAS1LQ9Y4W2 734 aaKnown RBP19.06■□□□□ 0.64
MCF2L-220ENST00000464800 EGFRP00533 1210 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 HOXB7P09629 217 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 GPSM2P81274 684 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 NEUROD2Q15784 382 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 RGMBQ6NW40 437 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 DLK2Q6UY11 383 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 ANKRD13DQ6ZTN6 518 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 C2orf69Q8N8R5 385 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 ISCA1Q9BUE6 129 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 POLLQ9UGP5 575 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 RTL9Q8NET4 1388 aa19.05■□□□□ 0.64
MCF2L-220ENST00000464800 PSME4Q14997 1843 aa19.04■□□□□ 0.64
MCF2L-220ENST00000464800 ADM5C9JUS6 153 aa19.04■□□□□ 0.64
MCF2L-220ENST00000464800 ATP5J2-PTCD1G3V325 749 aa19.04■□□□□ 0.64
MCF2L-220ENST00000464800 RALBP1Q15311 655 aa19.04■□□□□ 0.64
MCF2L-220ENST00000464800 CCDC146Q8IYE0 955 aa19.04■□□□□ 0.64
MCF2L-220ENST00000464800 DBF4Q9UBU7 674 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms