RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 TMOD3Q9NYL9 352 aa24.43■■□□□ 1.5
TUBGCP3-204ENST00000464139 SYT1P21579 422 aa24.42■■□□□ 1.5
TUBGCP3-204ENST00000464139 ME3Q16798 604 aa24.42■■□□□ 1.5
TUBGCP3-204ENST00000464139 CCDC191Q8NCU4 936 aa24.42■■□□□ 1.5
TUBGCP3-204ENST00000464139 ZNF594Q96JF6 807 aaPredicted RBP24.42■■□□□ 1.5
TUBGCP3-204ENST00000464139 TCEANC2Q96MN5 208 aa24.42■■□□□ 1.5
TUBGCP3-204ENST00000464139 NEUROD6Q96NK8 337 aa24.42■■□□□ 1.5
TUBGCP3-204ENST00000464139 TNS2Q63HR2 1409 aa24.42■■□□□ 1.5
TUBGCP3-204ENST00000464139 TCHHQ07283 1943 aa24.41■■□□□ 1.5
TUBGCP3-204ENST00000464139 TAF5LO75529 589 aa24.41■■□□□ 1.5
TUBGCP3-204ENST00000464139 PRIM1P49642 420 aaKnown RBP24.41■■□□□ 1.5
TUBGCP3-204ENST00000464139 DDX46Q7L014 1031 aaKnown RBP24.41■■□□□ 1.5
TUBGCP3-204ENST00000464139 STX6O43752 255 aa24.41■■□□□ 1.5
TUBGCP3-204ENST00000464139 NECAB1Q8N987 351 aa24.41■■□□□ 1.5
TUBGCP3-204ENST00000464139 TJP1Q07157 1748 aa24.41■■□□□ 1.5
TUBGCP3-204ENST00000464139 MBD3O95983 291 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 ZSCAN22P10073 491 aaPredicted RBP24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 TIMM10P62072 90 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 ST3GAL1Q11201 340 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 ZSCAN31Q96LW9 406 aaPredicted RBP24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 SEC62Q99442 399 aaKnown RBP24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 HAUS7Q99871 368 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 ASAP1Q9ULH1 1129 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 GADD45BO75293 160 aaPredicted RBP24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 GJB2P29033 226 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 LRRC24Q50LG9 513 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 RNF20Q5VTR2 975 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 CCDC129Q6ZRS4 1044 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 TPCN1Q9ULQ1 816 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 TOGARAM1Q9Y4F4 1720 aa24.4■■□□□ 1.5
TUBGCP3-204ENST00000464139 SYCE3A1L190 88 aa24.39■■□□□ 1.5
TUBGCP3-204ENST00000464139 PSMA5P28066 241 aa24.39■■□□□ 1.5
TUBGCP3-204ENST00000464139 USP48Q86UV5 1035 aa24.39■■□□□ 1.5
TUBGCP3-204ENST00000464139 SH2B1Q9NRF2 756 aaPredicted RBP24.39■■□□□ 1.5
TUBGCP3-204ENST00000464139 BTG4Q9NY30 223 aa24.39■■□□□ 1.49
TUBGCP3-204ENST00000464139 PIGBQ92521 554 aa24.38■■□□□ 1.49
TUBGCP3-204ENST00000464139 RBSNQ9H1K0 784 aa24.38■■□□□ 1.49
TUBGCP3-204ENST00000464139 ZNF609O15014 1411 aa24.38■■□□□ 1.49
TUBGCP3-204ENST00000464139 BLOC1S2Q6QNY1 142 aa24.38■■□□□ 1.49
TUBGCP3-204ENST00000464139 DNAJC10Q8IXB1 793 aa24.38■■□□□ 1.49
TUBGCP3-204ENST00000464139 CNPY2Q9Y2B0 182 aa24.37■■□□□ 1.49
TUBGCP3-204ENST00000464139 JCADQ9P266 1359 aa24.37■■□□□ 1.49
TUBGCP3-204ENST00000464139 IL15P40933 162 aaPredicted RBP24.36■■□□□ 1.49
TUBGCP3-204ENST00000464139 PUS3Q9BZE2 481 aaKnown RBP24.36■■□□□ 1.49
TUBGCP3-204ENST00000464139 ISCA1Q9BUE6 129 aa24.36■■□□□ 1.49
TUBGCP3-204ENST00000464139 EYA2O00167 538 aa24.35■■□□□ 1.49
TUBGCP3-204ENST00000464139 F13A1P00488 732 aa24.35■■□□□ 1.49
TUBGCP3-204ENST00000464139 RPS6KB1P23443 525 aa24.35■■□□□ 1.49
TUBGCP3-204ENST00000464139 TCIRG1Q13488 830 aa24.35■■□□□ 1.49
TUBGCP3-204ENST00000464139 SLFNL1Q499Z3 407 aa24.35■■□□□ 1.49
TUBGCP3-204ENST00000464139 GOLIM4O00461 696 aa24.35■■□□□ 1.49
TUBGCP3-204ENST00000464139 TPRNQ4KMQ1 711 aa24.34■■□□□ 1.49
TUBGCP3-204ENST00000464139 USPL1Q5W0Q7 1092 aa24.34■■□□□ 1.49
TUBGCP3-204ENST00000464139 LRSAM1Q6UWE0 723 aa24.34■■□□□ 1.49
TUBGCP3-204ENST00000464139 HMG20BQ9P0W2 317 aa24.34■■□□□ 1.49
TUBGCP3-204ENST00000464139 NHSL1Q5SYE7 1610 aa24.34■■□□□ 1.49
TUBGCP3-204ENST00000464139 MCMDC2Q4G0Z9 681 aa24.34■■□□□ 1.49
TUBGCP3-204ENST00000464139 KBTBD3Q8NAB2 608 aa24.34■■□□□ 1.49
TUBGCP3-204ENST00000464139 CCDC85AQ96PX6 553 aaPredicted RBP24.34■■□□□ 1.49
TUBGCP3-204ENST00000464139 ATG3Q9NT62 314 aa24.34■■□□□ 1.49
TUBGCP3-204ENST00000464139 TRIM44Q96DX7 344 aaPredicted RBP24.33■■□□□ 1.49
TUBGCP3-204ENST00000464139 MTMR6Q9Y217 621 aa24.33■■□□□ 1.49
TUBGCP3-204ENST00000464139 GPR108Q9NPR9 543 aa24.33■■□□□ 1.48
TUBGCP3-204ENST00000464139 PAG1Q9NWQ8 432 aa24.33■■□□□ 1.48
TUBGCP3-204ENST00000464139 KAT6BQ8WYB5 2073 aa24.32■■□□□ 1.48
TUBGCP3-204ENST00000464139 TOB2Q14106 344 aaPredicted RBP24.32■■□□□ 1.48
TUBGCP3-204ENST00000464139 TSGA10IPQ3SY00 556 aa24.32■■□□□ 1.48
TUBGCP3-204ENST00000464139 FAM89AQ96GI7 184 aa24.32■■□□□ 1.48
TUBGCP3-204ENST00000464139 RFX7Q2KHR2 1363 aa24.32■■□□□ 1.48
TUBGCP3-204ENST00000464139 ANP32BQ92688 251 aaKnown RBP24.32■■□□□ 1.48
TUBGCP3-204ENST00000464139 A0A1B0GUL7 405 aa24.31■■□□□ 1.48
TUBGCP3-204ENST00000464139 CCDC173Q0VFZ6 552 aa24.31■■□□□ 1.48
TUBGCP3-204ENST00000464139 VPS37CA5D8V6 355 aaPredicted RBP24.3■■□□□ 1.48
TUBGCP3-204ENST00000464139 KIF6Q6ZMV9 814 aa24.3■■□□□ 1.48
TUBGCP3-204ENST00000464139 ANKRD1Q15327 319 aa24.3■■□□□ 1.48
TUBGCP3-204ENST00000464139 CCDC57Q2TAC2 916 aa24.3■■□□□ 1.48
TUBGCP3-204ENST00000464139 TMEM87AQ8NBN3 555 aa24.3■■□□□ 1.48
TUBGCP3-204ENST00000464139 PPP1R9BQ96SB3 815 aa24.3■■□□□ 1.48
TUBGCP3-204ENST00000464139 STK3Q13188 491 aa24.29■■□□□ 1.48
TUBGCP3-204ENST00000464139 TEX13AQ9BXU3 409 aaPredicted RBP24.29■■□□□ 1.48
TUBGCP3-204ENST00000464139 FIBPO43427 364 aa24.29■■□□□ 1.48
TUBGCP3-204ENST00000464139 CIAO1O76071 339 aa24.29■■□□□ 1.48
TUBGCP3-204ENST00000464139 CYP21A2P08686 494 aa24.29■■□□□ 1.48
TUBGCP3-204ENST00000464139 U3KPZ7 1027 aaPredicted RBP24.29■■□□□ 1.48
TUBGCP3-204ENST00000464139 VSIG10Q8N0Z9 540 aa24.28■■□□□ 1.48
TUBGCP3-204ENST00000464139 SYNE4Q8N205 404 aa24.28■■□□□ 1.48
TUBGCP3-204ENST00000464139 ALDH8A1Q9H2A2 487 aaPredicted RBP24.28■■□□□ 1.48
TUBGCP3-204ENST00000464139 STARD3NLO95772 234 aa24.28■■□□□ 1.48
TUBGCP3-204ENST00000464139 IFIT1P09914 478 aaKnown RBP24.28■■□□□ 1.48
TUBGCP3-204ENST00000464139 DNM1Q05193 864 aaKnown RBP24.28■■□□□ 1.48
TUBGCP3-204ENST00000464139 NEK1Q96PY6 1258 aa24.28■■□□□ 1.48
TUBGCP3-204ENST00000464139 CEP126Q9P2H0 1117 aa24.28■■□□□ 1.48
TUBGCP3-204ENST00000464139 ATP6V1DQ9Y5K8 247 aa24.28■■□□□ 1.48
TUBGCP3-204ENST00000464139 KRT32Q14532 448 aa24.27■■□□□ 1.48
TUBGCP3-204ENST00000464139 LARP1BQ659C4 914 aaKnown RBP24.27■■□□□ 1.48
TUBGCP3-204ENST00000464139 SYAP1Q96A49 352 aaPredicted RBP24.27■■□□□ 1.48
TUBGCP3-204ENST00000464139 PALLDQ8WX93 1383 aa24.27■■□□□ 1.48
TUBGCP3-204ENST00000464139 SH3TC1Q8TE82 1336 aa24.27■■□□□ 1.48
TUBGCP3-204ENST00000464139 ESPNB1AK53 854 aa24.27■■□□□ 1.48
TUBGCP3-204ENST00000464139 HLFQ16534 295 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms