RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 YDJCA8MPS7 323 aa17.36■□□□□ 0.37
SRRT-206ENST00000460194 GMPSP49915 693 aaPredicted RBP17.36■□□□□ 0.37
SRRT-206ENST00000460194 SAPCD2Q86UD0 394 aa17.36■□□□□ 0.37
SRRT-206ENST00000460194 SUPT20HQ8NEM7 779 aa17.36■□□□□ 0.37
SRRT-206ENST00000460194 CDHR2Q9BYE9 1310 aa17.36■□□□□ 0.37
SRRT-206ENST00000460194 GRAPQ13588 217 aa17.35■□□□□ 0.37
SRRT-206ENST00000460194 HSP90AB3PQ58FF7 597 aa17.35■□□□□ 0.37
SRRT-206ENST00000460194 DPP8Q6V1X1 898 aaPredicted RBP17.35■□□□□ 0.37
SRRT-206ENST00000460194 MPNDQ8N594 471 aa17.35■□□□□ 0.37
SRRT-206ENST00000460194 GRAPLQ8TC17 118 aaPredicted RBP17.35■□□□□ 0.37
SRRT-206ENST00000460194 TRIM35Q9UPQ4 493 aa17.35■□□□□ 0.37
SRRT-206ENST00000460194 ECE1P42892 770 aa17.34■□□□□ 0.37
SRRT-206ENST00000460194 AIMP1Q12904 312 aaKnown RBP17.34■□□□□ 0.37
SRRT-206ENST00000460194 SH3TC1Q8TE82 1336 aa17.34■□□□□ 0.37
SRRT-206ENST00000460194 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
SRRT-206ENST00000460194 ABHD8Q96I13 439 aa17.34■□□□□ 0.37
SRRT-206ENST00000460194 HHIPL1Q96JK4 782 aa17.34■□□□□ 0.37
SRRT-206ENST00000460194 GPR101Q96P66 508 aaPredicted RBP17.34■□□□□ 0.37
SRRT-206ENST00000460194 SHTN1A0MZ66 631 aa17.33■□□□□ 0.36
SRRT-206ENST00000460194 MAP2K2P36507 400 aa17.33■□□□□ 0.36
SRRT-206ENST00000460194 RALBP1Q15311 655 aa17.33■□□□□ 0.36
SRRT-206ENST00000460194 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.36
SRRT-206ENST00000460194 ZC3H15Q8WU90 426 aaKnown RBP17.33■□□□□ 0.36
SRRT-206ENST00000460194 ISCA1Q9BUE6 129 aa17.33■□□□□ 0.36
SRRT-206ENST00000460194 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.36
SRRT-206ENST00000460194 TRMT112Q9UI30 125 aaKnown RBP17.33■□□□□ 0.36
SRRT-206ENST00000460194 SCN9AQ15858 1988 aa17.33■□□□□ 0.36
SRRT-206ENST00000460194 CASP8AP2Q9UKL3 1982 aa17.32■□□□□ 0.36
SRRT-206ENST00000460194 AOC2O75106 756 aa17.32■□□□□ 0.36
SRRT-206ENST00000460194 RAD17O75943 681 aa17.32■□□□□ 0.36
SRRT-206ENST00000460194 TRPM4Q8TD43 1214 aa17.32■□□□□ 0.36
SRRT-206ENST00000460194 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
SRRT-206ENST00000460194 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
SRRT-206ENST00000460194 DDX46Q7L014 1031 aaKnown RBP17.31■□□□□ 0.36
SRRT-206ENST00000460194 CHPF2Q9P2E5 772 aa17.31■□□□□ 0.36
SRRT-206ENST00000460194 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
SRRT-206ENST00000460194 TNIP1Q15025 636 aa17.3■□□□□ 0.36
SRRT-206ENST00000460194 TMC4Q7Z404 712 aa17.3■□□□□ 0.36
SRRT-206ENST00000460194 PLBD2Q8NHP8 589 aa17.3■□□□□ 0.36
SRRT-206ENST00000460194 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
SRRT-206ENST00000460194 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
SRRT-206ENST00000460194 CNOT7Q9UIV1 285 aaKnown RBP17.3■□□□□ 0.36
SRRT-206ENST00000460194 HOXB7P09629 217 aa17.29■□□□□ 0.36
SRRT-206ENST00000460194 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
SRRT-206ENST00000460194 PSME4Q14997 1843 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 EGFRP00533 1210 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 TRIM28Q13263 835 aaKnown RBP17.28■□□□□ 0.36
SRRT-206ENST00000460194 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 ANKRD13DQ6ZTN6 518 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 CDC37L1Q7L3B6 337 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 DPF2Q92785 391 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 FAM89AQ96GI7 184 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 POLLQ9UGP5 575 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
SRRT-206ENST00000460194 RGS19P49795 217 aa17.27■□□□□ 0.36
SRRT-206ENST00000460194 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
SRRT-206ENST00000460194 KCNQ5Q9NR82 932 aa17.27■□□□□ 0.36
SRRT-206ENST00000460194 TSKSQ9UJT2 592 aa17.27■□□□□ 0.36
SRRT-206ENST00000460194 ZBTB12Q9Y330 459 aaPredicted RBP17.27■□□□□ 0.36
SRRT-206ENST00000460194 PSMD14O00487 310 aa17.26■□□□□ 0.35
SRRT-206ENST00000460194 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
SRRT-206ENST00000460194 GPSM2P81274 684 aa17.26■□□□□ 0.35
SRRT-206ENST00000460194 GRM1Q13255 1194 aa17.26■□□□□ 0.35
SRRT-206ENST00000460194 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
SRRT-206ENST00000460194 WASHC4Q2M389 1173 aa17.26■□□□□ 0.35
SRRT-206ENST00000460194 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
SRRT-206ENST00000460194 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
SRRT-206ENST00000460194 MICALL2Q8IY33 904 aa17.26■□□□□ 0.35
SRRT-206ENST00000460194 ZIC5Q96T25 663 aa17.26■□□□□ 0.35
SRRT-206ENST00000460194 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
SRRT-206ENST00000460194 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
SRRT-206ENST00000460194 MYBBP1AQ9BQG0 1328 aaKnown RBP17.25■□□□□ 0.35
SRRT-206ENST00000460194 ATP5J2-PTCD1G3V325 749 aa17.25■□□□□ 0.35
SRRT-206ENST00000460194 ZNF853P0CG23 659 aa17.25■□□□□ 0.35
SRRT-206ENST00000460194 SAMD7Q7Z3H4 446 aa17.25■□□□□ 0.35
SRRT-206ENST00000460194 CFAP44Q96MT7 982 aa17.25■□□□□ 0.35
SRRT-206ENST00000460194 BEGAINQ9BUH8 593 aa17.24■□□□□ 0.35
SRRT-206ENST00000460194 DBNDD1Q9H9R9 158 aa17.24■□□□□ 0.35
SRRT-206ENST00000460194 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
SRRT-206ENST00000460194 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
SRRT-206ENST00000460194 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
SRRT-206ENST00000460194 FAM155AB1AL88 458 aaPredicted RBP17.23■□□□□ 0.35
SRRT-206ENST00000460194 H7C1D1 291 aa17.23■□□□□ 0.35
SRRT-206ENST00000460194 CA12O43570 354 aa17.23■□□□□ 0.35
SRRT-206ENST00000460194 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
SRRT-206ENST00000460194 USP48Q86UV5 1035 aa17.23■□□□□ 0.35
SRRT-206ENST00000460194 TBC1D16Q8TBP0 767 aa17.23■□□□□ 0.35
SRRT-206ENST00000460194 MBIPQ9NS73 344 aa17.23■□□□□ 0.35
SRRT-206ENST00000460194 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
SRRT-206ENST00000460194 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
SRRT-206ENST00000460194 TNRC18O15417 2968 aaPredicted RBP17.23■□□□□ 0.35
SRRT-206ENST00000460194 ZNF609O15014 1411 aa17.22■□□□□ 0.35
SRRT-206ENST00000460194 RPS8P62241 208 aaKnown RBP17.22■□□□□ 0.35
SRRT-206ENST00000460194 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
SRRT-206ENST00000460194 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
SRRT-206ENST00000460194 IRS4O14654 1257 aaPredicted RBP17.21■□□□□ 0.35
SRRT-206ENST00000460194 ECE2O60344 883 aa17.21■□□□□ 0.35
SRRT-206ENST00000460194 VIL1P09327 827 aaKnown RBP17.21■□□□□ 0.35
SRRT-206ENST00000460194 RPS12P25398 132 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms