RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 SLC51AQ86UW1 340 aa5.49□□□□□ -1.53
LINC02540-201ENST00000455554 TRPM4Q8TD43 1214 aa5.49□□□□□ -1.53
LINC02540-201ENST00000455554 TTC9Q92623 222 aa5.49□□□□□ -1.53
LINC02540-201ENST00000455554 COL17A1Q9UMD9 1497 aaPredicted RBP5.48□□□□□ -1.53
LINC02540-201ENST00000455554 PAX4O43316 350 aa5.48□□□□□ -1.53
LINC02540-201ENST00000455554 ADAMTS4O75173 837 aa5.48□□□□□ -1.53
LINC02540-201ENST00000455554 FSTP19883 344 aa5.48□□□□□ -1.53
LINC02540-201ENST00000455554 HFE2Q6ZVN8 426 aa5.48□□□□□ -1.53
LINC02540-201ENST00000455554 DLL1O00548 723 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 RAD21O60216 631 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 TARSP26639 723 aaKnown RBP5.47□□□□□ -1.53
LINC02540-201ENST00000455554 INPP5BP32019 993 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 SEC13P55735 322 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 GPLD1P80108 840 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 DZIP1LQ8IYY4 767 aaKnown RBP5.47□□□□□ -1.53
LINC02540-201ENST00000455554 IFT43Q96FT9 208 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 SMG9Q9H0W8 520 aaKnown RBP5.47□□□□□ -1.53
LINC02540-201ENST00000455554 AKTIPQ9H8T0 292 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 USP20Q9Y2K6 914 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 RARAP10276 462 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 RASA1P20936 1047 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 ARID4AP29374 1257 aaPredicted RBP5.46□□□□□ -1.54
LINC02540-201ENST00000455554 IDH3AP50213 366 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 HDGFL1Q5TGJ6 251 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 C11orf16Q9NQ32 467 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 KLK14Q9P0G3 267 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 TXKP42681 527 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 CD97P48960 835 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 ARSDP51689 593 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 AGGF1Q8N302 714 aaeCLIP5.45□□□□□ -1.54
LINC02540-201ENST00000455554 TMEM130Q8N3G9 435 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 MRPL18Q9H0U6 180 aaKnown RBP5.45□□□□□ -1.54
LINC02540-201ENST00000455554 OAS3Q9Y6K5 1087 aaKnown RBP5.45□□□□□ -1.54
LINC02540-201ENST00000455554 F8W735 103 aaPredicted RBP5.44□□□□□ -1.54
LINC02540-201ENST00000455554 SASH3O75995 380 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 EIF2AK2P19525 551 aaKnown RBP5.44□□□□□ -1.54
LINC02540-201ENST00000455554 IRAK1P51617 712 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 NRLP54845 237 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 FMNL2Q96PY5 1086 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 HINFPQ9BQA5 517 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 J3QW42 95 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 PTCD1O75127 700 aaKnown RBP5.43□□□□□ -1.54
LINC02540-201ENST00000455554 TGFB1P01137 390 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 IGFBP4P22692 258 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 DGKZQ13574 1117 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 DCAF11Q8TEB1 546 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 SRA1Q9HD15 236 aaKnown RBP5.43□□□□□ -1.54
LINC02540-201ENST00000455554 GSC2O15499 205 aa5.42□□□□□ -1.54
LINC02540-201ENST00000455554 MICAL2O94851 1124 aa5.42□□□□□ -1.54
LINC02540-201ENST00000455554 LARP1Q6PKG0 1096 aaKnown RBP5.42□□□□□ -1.54
LINC02540-201ENST00000455554 Q6ZS46 218 aa5.42□□□□□ -1.54
LINC02540-201ENST00000455554 PLD4Q96BZ4 506 aa5.42□□□□□ -1.54
LINC02540-201ENST00000455554 TLR7Q9NYK1 1049 aaKnown RBP5.42□□□□□ -1.54
LINC02540-201ENST00000455554 SLC24A1O60721 1099 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 YBX3P16989 372 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 UBTFP17480 764 aaKnown RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 TAL1P17542 331 aaPredicted RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 TPRNQ4KMQ1 711 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 GDF6Q6KF10 455 aaPredicted RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 ADAMTSL4Q6UY14 1074 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 MAP4K3Q8IVH8 894 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 IL22RA1Q8N6P7 574 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 UBL7Q96S82 380 aaPredicted RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 QTRT2Q9H974 415 aaKnown RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 RAXQ9Y2V3 346 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 ARID1BQ8NFD5 2236 aaPredicted RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 LOC102724428A0A0B4J2F2 783 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 KIAA1324LA8MWY0 1029 aaPredicted RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 OPLAHO14841 1288 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 COBLO75128 1261 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 WISP1O95388 367 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 EGFRP00533 1210 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 IGLV1-40P01703 118 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 GLB1P16278 677 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 SIK1P57059 783 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 DPYDQ12882 1025 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 SETDB1Q15047 1291 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 C11orf91Q3C1V1 193 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 TFIP11Q9UBB9 837 aaKnown RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 STOML1Q9UBI4 398 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 RTCBQ9Y3I0 505 aaKnown RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 MAFBQ9Y5Q3 323 aaPredicted RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 XYLBO75191 536 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 GHRHP01286 108 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 PSAPP07602 524 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 GP2P55259 537 aaKnown RBP5.39□□□□□ -1.55
LINC02540-201ENST00000455554 PTK7Q13308 1070 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 CRTC2Q53ET0 693 aaPredicted RBP5.39□□□□□ -1.55
LINC02540-201ENST00000455554 ARMC10Q8N2F6 343 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 GALNT11Q8NCW6 608 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 NSUN5Q96P11 429 aaKnown RBP5.39□□□□□ -1.55
LINC02540-201ENST00000455554 RBSNQ9H1K0 784 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 TM4SF5O14894 197 aa5.38□□□□□ -1.55
LINC02540-201ENST00000455554 DHX15O43143 795 aaKnown RBP5.38□□□□□ -1.55
LINC02540-201ENST00000455554 SOX18P35713 384 aa5.38□□□□□ -1.55
LINC02540-201ENST00000455554 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.38□□□□□ -1.55
LINC02540-201ENST00000455554 VTI1AQ96AJ9 217 aa5.38□□□□□ -1.55
LINC02540-201ENST00000455554 MYO19Q96H55 970 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms