RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SAGE1Q9NXZ1 904 aa7.87□□□□□ -1.15
SBDSP1-204ENST00000453858 LTBP3Q9NS15 1303 aa7.86□□□□□ -1.15
SBDSP1-204ENST00000453858 TRAF5O00463 557 aa7.86□□□□□ -1.15
SBDSP1-204ENST00000453858 PLA2G5P39877 138 aa7.86□□□□□ -1.15
SBDSP1-204ENST00000453858 SLC4A3P48751 1232 aa7.86□□□□□ -1.15
SBDSP1-204ENST00000453858 MDM2Q00987 491 aaPredicted RBP7.86□□□□□ -1.15
SBDSP1-204ENST00000453858 PKN2Q16513 984 aaKnown RBP7.86□□□□□ -1.15
SBDSP1-204ENST00000453858 PIGBQ92521 554 aa7.86□□□□□ -1.15
SBDSP1-204ENST00000453858 CABP1Q9NZU7 370 aa7.86□□□□□ -1.15
SBDSP1-204ENST00000453858 HACL1Q9UJ83 578 aa7.86□□□□□ -1.15
SBDSP1-204ENST00000453858 ERBB4Q15303 1308 aa7.85□□□□□ -1.15
SBDSP1-204ENST00000453858 TTC21BQ7Z4L5 1316 aa7.85□□□□□ -1.15
SBDSP1-204ENST00000453858 GIGYF2Q6Y7W6 1299 aaKnown RBP7.85□□□□□ -1.15
SBDSP1-204ENST00000453858 SULF1Q8IWU6 871 aa7.85□□□□□ -1.15
SBDSP1-204ENST00000453858 KCTD12Q96CX2 325 aaKnown RBP7.85□□□□□ -1.15
SBDSP1-204ENST00000453858 PHOX2BQ99453 314 aa7.85□□□□□ -1.15
SBDSP1-204ENST00000453858 PRO3102Q9H379 93 aa7.85□□□□□ -1.15
SBDSP1-204ENST00000453858 RNF186Q9NXI6 227 aa7.85□□□□□ -1.15
SBDSP1-204ENST00000453858 RAPGEFL1Q9UHV5 662 aa7.85□□□□□ -1.15
SBDSP1-204ENST00000453858 POLRMTO00411 1230 aaKnown RBP7.84□□□□□ -1.15
SBDSP1-204ENST00000453858 RC3H1Q5TC82 1133 aaKnown RBP7.84□□□□□ -1.15
SBDSP1-204ENST00000453858 TMEM134Q9H6X4 195 aa7.84□□□□□ -1.15
SBDSP1-204ENST00000453858 RTCBQ9Y3I0 505 aaKnown RBP7.84□□□□□ -1.15
SBDSP1-204ENST00000453858 FER1L6Q2WGJ9 1857 aa7.83□□□□□ -1.16
SBDSP1-204ENST00000453858 H0YGN5 161 aa7.83□□□□□ -1.16
SBDSP1-204ENST00000453858 SSTR3P32745 418 aaPredicted RBP7.83□□□□□ -1.16
SBDSP1-204ENST00000453858 NOGQ13253 232 aa7.83□□□□□ -1.16
SBDSP1-204ENST00000453858 MRPL50Q8N5N7 158 aaKnown RBP7.83□□□□□ -1.16
SBDSP1-204ENST00000453858 SNX27Q96L92 541 aa7.83□□□□□ -1.16
SBDSP1-204ENST00000453858 SLC4A9Q96Q91 983 aa7.83□□□□□ -1.16
SBDSP1-204ENST00000453858 FAM155AB1AL88 458 aaPredicted RBP7.82□□□□□ -1.16
SBDSP1-204ENST00000453858 TRPA1O75762 1119 aa7.82□□□□□ -1.16
SBDSP1-204ENST00000453858 RFC4P35249 363 aa7.82□□□□□ -1.16
SBDSP1-204ENST00000453858 SRPK2P78362 688 aaKnown RBP7.82□□□□□ -1.16
SBDSP1-204ENST00000453858 DIXDC1Q155Q3 683 aa7.82□□□□□ -1.16
SBDSP1-204ENST00000453858 AKAP4Q5JQC9 854 aa7.82□□□□□ -1.16
SBDSP1-204ENST00000453858 NECTIN2Q92692 538 aa7.82□□□□□ -1.16
SBDSP1-204ENST00000453858 TRPM7Q96QT4 1865 aa7.82□□□□□ -1.16
SBDSP1-204ENST00000453858 FAM217BQ9NTX9 383 aaPredicted RBP7.82□□□□□ -1.16
SBDSP1-204ENST00000453858 ZNF541Q9H0D2 1346 aa7.81□□□□□ -1.16
SBDSP1-204ENST00000453858 SMAPO00193 183 aa7.81□□□□□ -1.16
SBDSP1-204ENST00000453858 C21orf2O43822 256 aa7.81□□□□□ -1.16
SBDSP1-204ENST00000453858 RPS6KA4O75676 772 aa7.81□□□□□ -1.16
SBDSP1-204ENST00000453858 ATP6V1AP38606 617 aa7.81□□□□□ -1.16
SBDSP1-204ENST00000453858 ASAP1Q9ULH1 1129 aa7.81□□□□□ -1.16
SBDSP1-204ENST00000453858 C3orf80F5H4A9 247 aa7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 SOX1O00570 391 aaPredicted RBP7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 CYP27B1O15528 508 aa7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 FBXO46Q6PJ61 603 aaPredicted RBP7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 THSD4Q6ZMP0 1018 aa7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 SLF2Q8IX21 1173 aa7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 IP6K1Q92551 441 aa7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 REPIN1Q9BWE0 567 aaKnown RBP7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 RSPH6AQ9H0K4 717 aa7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 TAOK3Q9H2K8 898 aa7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 SRP68Q9UHB9 627 aaKnown RBP7.8□□□□□ -1.16
SBDSP1-204ENST00000453858 FAM208AQ9UK61 1670 aaKnown RBP7.79□□□□□ -1.16
SBDSP1-204ENST00000453858 RNF123Q5XPI4 1314 aa7.79□□□□□ -1.16
SBDSP1-204ENST00000453858 DLEC1Q9Y238 1755 aa7.79□□□□□ -1.16
SBDSP1-204ENST00000453858 CDH23Q9H251 3354 aa7.79□□□□□ -1.16
SBDSP1-204ENST00000453858 GOLGA8CPA6NN73 597 aa7.79□□□□□ -1.16
SBDSP1-204ENST00000453858 GOPCQ9HD26 462 aa7.79□□□□□ -1.16
SBDSP1-204ENST00000453858 SEPT9Q9UHD8 586 aaPredicted RBP7.79□□□□□ -1.16
SBDSP1-204ENST00000453858 STXBP5LQ9Y2K9 1186 aa7.79□□□□□ -1.16
SBDSP1-204ENST00000453858 USP31Q70CQ4 1352 aa7.79□□□□□ -1.16
SBDSP1-204ENST00000453858 CGNL1Q0VF96 1302 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 MAP3K19Q56UN5 1328 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 TTC21AQ8NDW8 1320 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 USP42Q9H9J4 1324 aaKnown RBP7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 ITGB4P16144 1822 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 FZD9O00144 591 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 MS4A1P11836 297 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 EN2P19622 333 aaPredicted RBP7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 ITGAEP38570 1179 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 KIF23Q02241 960 aaPredicted RBP7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 C2CD5Q86YS7 1000 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 SYNE4Q8N205 404 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 IL27Q8NEV9 243 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 ZFRQ96KR1 1074 aaKnown RBP7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 CSRNP1Q96S65 589 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 FAM117AQ9C073 453 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 ATG3Q9NT62 314 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 CD163L1Q9NR16 1453 aa7.78□□□□□ -1.16
SBDSP1-204ENST00000453858 MYH14Q7Z406 1995 aaKnown RBP7.77□□□□□ -1.17
SBDSP1-204ENST00000453858 CELF2O95319 508 aaKnown RBP7.77□□□□□ -1.17
SBDSP1-204ENST00000453858 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.77□□□□□ -1.17
SBDSP1-204ENST00000453858 C7orf43Q8WVR3 580 aa7.77□□□□□ -1.17
SBDSP1-204ENST00000453858 FAM122AQ96E09 287 aa7.77□□□□□ -1.17
SBDSP1-204ENST00000453858 LRCH3Q96II8 777 aa7.77□□□□□ -1.17
SBDSP1-204ENST00000453858 SMG6Q86US8 1419 aaKnown RBP7.77□□□□□ -1.17
SBDSP1-204ENST00000453858 NCOR1O75376 2440 aa7.77□□□□□ -1.17
SBDSP1-204ENST00000453858 CNTNAP4Q9C0A0 1308 aa7.77□□□□□ -1.17
SBDSP1-204ENST00000453858 KDRP35968 1356 aa7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 H0YIN7 160 aa7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 RGS20O76081 388 aa7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 CD46P15529 392 aa7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 SWT1Q5T5J6 900 aaKnown RBP7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 NBPF6Q5VWK0 638 aa7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 INTS3Q68E01 1043 aaKnown RBP7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 GPC2Q8N158 579 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms