RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ZMIZ1Q9ULJ6 1067 aa9.53□□□□□ -0.88
BRCC3-208ENST00000453705 FAM208AQ9UK61 1670 aaKnown RBP9.53□□□□□ -0.88
BRCC3-208ENST00000453705 RSPH1Q8WYR4 309 aa9.52□□□□□ -0.88
BRCC3-208ENST00000453705 POLKQ9UBT6 870 aa9.52□□□□□ -0.88
BRCC3-208ENST00000453705 NCAPD2Q15021 1401 aa9.52□□□□□ -0.88
BRCC3-208ENST00000453705 CACNA1FO60840 1977 aa9.52□□□□□ -0.89
BRCC3-208ENST00000453705 LMO7Q8WWI1 1683 aa9.52□□□□□ -0.89
BRCC3-208ENST00000453705 ARHGEF10O15013 1369 aa9.52□□□□□ -0.89
BRCC3-208ENST00000453705 MED1Q15648 1581 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-208ENST00000453705 ATG7O95352 703 aa9.52□□□□□ -0.89
BRCC3-208ENST00000453705 APAF1O14727 1248 aa9.51□□□□□ -0.89
BRCC3-208ENST00000453705 CDCA7LQ96GN5 454 aa9.51□□□□□ -0.89
BRCC3-208ENST00000453705 CEP63Q96MT8 703 aa9.51□□□□□ -0.89
BRCC3-208ENST00000453705 ZBTB47Q9UFB7 747 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-208ENST00000453705 DIAPH1O60610 1272 aaKnown RBP9.51□□□□□ -0.89
BRCC3-208ENST00000453705 PYGBP11216 843 aa9.51□□□□□ -0.89
BRCC3-208ENST00000453705 KCNA6P17658 529 aa9.51□□□□□ -0.89
BRCC3-208ENST00000453705 XPCQ01831 940 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-208ENST00000453705 RNF187Q5TA31 235 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-208ENST00000453705 ARMC3Q5W041 872 aa9.51□□□□□ -0.89
BRCC3-208ENST00000453705 METTL16Q86W50 562 aaKnown RBP9.51□□□□□ -0.89
BRCC3-208ENST00000453705 CENPOQ9BU64 300 aa9.51□□□□□ -0.89
BRCC3-208ENST00000453705 RNF19AQ9NV58 838 aa9.51□□□□□ -0.89
BRCC3-208ENST00000453705 ADAMTS7Q9UKP4 1686 aa9.51□□□□□ -0.89
BRCC3-208ENST00000453705 DSG3P32926 999 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 IL13P35225 146 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 NYAP1Q6ZVC0 841 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.5□□□□□ -0.89
BRCC3-208ENST00000453705 MYCBPQ99417 103 aaPredicted RBP9.5□□□□□ -0.89
BRCC3-208ENST00000453705 CDC5LQ99459 802 aaKnown RBP9.5□□□□□ -0.89
BRCC3-208ENST00000453705 GGNBP2Q9H3C7 697 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 KDRP35968 1356 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 NUTM2FA1L443 756 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 TCP11L2Q8N4U5 519 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 SCINQ9Y6U3 715 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 ACEP12821 1306 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 SBNO1A3KN83 1393 aa9.5□□□□□ -0.89
BRCC3-208ENST00000453705 PDGFRBP09619 1106 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 HSPA2P54652 639 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 PODNQ7Z5L7 613 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 USP48Q86UV5 1035 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 AS3MTQ9HBK9 375 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 INTUQ9ULD6 942 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 RASSF7Q02833 373 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 SIM2Q14190 667 aaPredicted RBP9.49□□□□□ -0.89
BRCC3-208ENST00000453705 PDE3AQ14432 1141 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 KCTD2Q14681 263 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 COG3Q96JB2 828 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.49□□□□□ -0.89
BRCC3-208ENST00000453705 PRSS47A8MTI9 375 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 TOMM20Q15388 145 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 HSCBQ8IWL3 235 aa9.49□□□□□ -0.89
BRCC3-208ENST00000453705 NDUFV2P19404 249 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 LRRC41Q15345 812 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 TTC30AQ86WT1 665 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 CEP120Q8N960 986 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 NLRP7Q8WX94 980 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 EPAS1Q99814 870 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 RRP9O43818 475 aaKnown RBP9.48□□□□□ -0.89
BRCC3-208ENST00000453705 TMPOP42166 694 aaKnown RBP9.48□□□□□ -0.89
BRCC3-208ENST00000453705 SGIP1Q9BQI5 828 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 ZHX3Q9H4I2 956 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 PRDM4Q9UKN5 801 aa9.48□□□□□ -0.89
BRCC3-208ENST00000453705 FAM200BP0CF97 657 aa9.47□□□□□ -0.89
BRCC3-208ENST00000453705 GNALP38405 381 aa9.47□□□□□ -0.89
BRCC3-208ENST00000453705 FLT4P35916 1363 aa9.47□□□□□ -0.89
BRCC3-208ENST00000453705 CALD1Q05682 793 aaKnown RBP9.47□□□□□ -0.89
BRCC3-208ENST00000453705 SUGP1Q8IWZ8 645 aaKnown RBP9.47□□□□□ -0.89
BRCC3-208ENST00000453705 TRIM35Q9UPQ4 493 aa9.47□□□□□ -0.89
BRCC3-208ENST00000453705 VGLL3A8MV65 326 aa9.46□□□□□ -0.89
BRCC3-208ENST00000453705 TCERG1O14776 1098 aaKnown RBP9.46□□□□□ -0.89
BRCC3-208ENST00000453705 FGAP02671 866 aa9.46□□□□□ -0.89
BRCC3-208ENST00000453705 VAC14Q08AM6 782 aa9.46□□□□□ -0.89
BRCC3-208ENST00000453705 MTA1Q13330 715 aa9.46□□□□□ -0.89
BRCC3-208ENST00000453705 IFFO2Q5TF58 517 aa9.46□□□□□ -0.89
BRCC3-208ENST00000453705 ANKRD23Q86SG2 305 aa9.46□□□□□ -0.89
BRCC3-208ENST00000453705 NME9Q86XW9 330 aa9.46□□□□□ -0.89
BRCC3-208ENST00000453705 SLC45A1Q9Y2W3 748 aa9.46□□□□□ -0.89
BRCC3-208ENST00000453705 COL18A1P39060 1754 aa9.46□□□□□ -0.9
BRCC3-208ENST00000453705 PCGF5Q86SE9 256 aa9.46□□□□□ -0.9
BRCC3-208ENST00000453705 BEGAINQ9BUH8 593 aa9.46□□□□□ -0.9
BRCC3-208ENST00000453705 GJA3Q9Y6H8 435 aa9.46□□□□□ -0.9
BRCC3-208ENST00000453705 HIP1RO75146 1068 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 SETDB1Q15047 1291 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 MYSM1Q5VVJ2 828 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 KANSL2Q9H9L4 492 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 SIPA1L3O60292 1781 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-208ENST00000453705 KDM2BQ8NHM5 1336 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 DPYSL4O14531 572 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 ZNF853P0CG23 659 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 U2AF1L5P0DN76 240 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-208ENST00000453705 NAT2P11245 290 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 U2AF1Q01081 240 aaKnown RBP eCLIP9.45□□□□□ -0.9
BRCC3-208ENST00000453705 NFE2L2Q16236 605 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 POTEDQ86YR6 584 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 GAS2L2Q8NHY3 880 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 OSBPL2Q9H1P3 480 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 OVOS2A0A0G2JMS6 1433 aa9.45□□□□□ -0.9
BRCC3-208ENST00000453705 KDM3BQ7LBC6 1761 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms