RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 USP4Q13107 963 aa9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 ESCO1Q5FWF5 840 aa9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 LARP1Q6PKG0 1096 aaKnown RBP9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 SNIP1Q8TAD8 396 aaKnown RBP9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 KIF24Q5T7B8 1368 aa9.54□□□□□ -0.88
R3HDM1-210ENST00000443537 AATKQ6ZMQ8 1374 aa9.54□□□□□ -0.88
R3HDM1-210ENST00000443537 PHRF1Q9P1Y6 1649 aaKnown RBP9.54□□□□□ -0.88
R3HDM1-210ENST00000443537 CSB-PGBD3P0DP91 1061 aa9.54□□□□□ -0.88
R3HDM1-210ENST00000443537 RASA1P20936 1047 aa9.54□□□□□ -0.88
R3HDM1-210ENST00000443537 CCDC116Q8IYX3 515 aa9.54□□□□□ -0.88
R3HDM1-210ENST00000443537 OVOS2A0A0J9YW53 1432 aa9.54□□□□□ -0.88
R3HDM1-210ENST00000443537 OVOS2Q6IE36 1432 aa9.54□□□□□ -0.88
R3HDM1-210ENST00000443537 TTC21BQ7Z4L5 1316 aa9.54□□□□□ -0.88
R3HDM1-210ENST00000443537 AHDC1Q5TGY3 1603 aaPredicted RBP9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 INSRP06213 1382 aa9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 FYB1O15117 783 aa9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 CC2D1BQ5T0F9 858 aaKnown RBP9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 MORC1Q86VD1 984 aa9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 RETREG2Q8NC44 543 aa9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 COG3Q96JB2 828 aa9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 TMPRSS4Q9NRS4 437 aa9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 MED1Q15648 1581 aaPredicted RBP9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 MARF1Q9Y4F3 1742 aaKnown RBP9.53□□□□□ -0.88
R3HDM1-210ENST00000443537 ABCC6O95255 1503 aa9.52□□□□□ -0.88
R3HDM1-210ENST00000443537 ROBO1Q9Y6N7 1651 aa9.52□□□□□ -0.89
R3HDM1-210ENST00000443537 ATP1A2P50993 1020 aa9.52□□□□□ -0.89
R3HDM1-210ENST00000443537 NNTQ13423 1086 aa9.52□□□□□ -0.89
R3HDM1-210ENST00000443537 PPP1R26Q5T8A7 1209 aaPredicted RBP9.52□□□□□ -0.89
R3HDM1-210ENST00000443537 SMG6Q86US8 1419 aaKnown RBP9.52□□□□□ -0.89
R3HDM1-210ENST00000443537 CYLDQ9NQC7 956 aa9.52□□□□□ -0.89
R3HDM1-210ENST00000443537 PXDNQ92626 1479 aa9.52□□□□□ -0.89
R3HDM1-210ENST00000443537 GDF9O60383 454 aa9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 TOM1O60784 492 aa9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 ATG7O95352 703 aa9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 PDIA4P13667 645 aaKnown RBP9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 GTF2IP78347 998 aa9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 PMFBP1Q8TBY8 1022 aa9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 ZNF594Q96JF6 807 aaPredicted RBP9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 CFAP53Q96M91 514 aa9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 DNAAF2Q9NVR5 837 aaKnown RBP9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 PGPEP1Q9NXJ5 209 aa9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 RBM19Q9Y4C8 960 aaKnown RBP9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 CDK12Q9NYV4 1490 aaPredicted RBP9.51□□□□□ -0.89
R3HDM1-210ENST00000443537 TNS3Q68CZ2 1445 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L15C9J2P7 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L13C9JLJ4 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L11C9JVI0 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L21D6R901 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L18D6R9N7 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L22D6RA61 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L17D6RBQ6 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L19D6RCP7 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L20D6RJB6 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 NR3C2P08235 984 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 MYT1Q01538 1121 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 USP17L24Q0WX57 530 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 CC2D2BQ6DHV5 1058 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 ZNF784Q8NCA9 323 aaPredicted RBP9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 KCNH5Q8NCM2 988 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 MRS2Q9HD23 443 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 EMILIN1Q9Y6C2 1016 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 SLIT3O75094 1523 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 LTN1O94822 1766 aa9.5□□□□□ -0.89
R3HDM1-210ENST00000443537 CRYBG1Q9Y4K1 1723 aa9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 FAM196BA6NMK8 535 aa9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 J3QL48 77 aa9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 PPP2R1AP30153 589 aa9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 SCTRP47872 440 aa9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 PDE4CQ08493 712 aa9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 CRTC2Q53ET0 693 aaPredicted RBP9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 BRINP3Q76B58 766 aa9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 ORAI2Q96SN7 254 aa9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 NOVA2Q9UNW9 492 aaKnown RBP9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 RTL1A6NKG5 1358 aa9.49□□□□□ -0.89
R3HDM1-210ENST00000443537 FOXO3O43524 673 aa9.48□□□□□ -0.89
R3HDM1-210ENST00000443537 RGS20O76081 388 aa9.48□□□□□ -0.89
R3HDM1-210ENST00000443537 KRT28Q7Z3Y7 464 aa9.48□□□□□ -0.89
R3HDM1-210ENST00000443537 ABTB2Q8N961 1025 aa9.48□□□□□ -0.89
R3HDM1-210ENST00000443537 SOS2Q07890 1332 aaPredicted RBP9.48□□□□□ -0.89
R3HDM1-210ENST00000443537 COL22A1Q8NFW1 1626 aaPredicted RBP9.48□□□□□ -0.89
R3HDM1-210ENST00000443537 PHLPP1O60346 1717 aa9.48□□□□□ -0.89
R3HDM1-210ENST00000443537 ERVK-9P63128 1117 aa9.47□□□□□ -0.89
R3HDM1-210ENST00000443537 CLDN10P78369 228 aa9.47□□□□□ -0.89
R3HDM1-210ENST00000443537 NME9Q86XW9 330 aa9.47□□□□□ -0.89
R3HDM1-210ENST00000443537 GGNBP2Q9H3C7 697 aa9.47□□□□□ -0.89
R3HDM1-210ENST00000443537 FAM208AQ9UK61 1670 aaKnown RBP9.47□□□□□ -0.89
R3HDM1-210ENST00000443537 USP19O94966 1318 aa9.47□□□□□ -0.89
R3HDM1-210ENST00000443537 ABCA3Q99758 1704 aa9.47□□□□□ -0.89
R3HDM1-210ENST00000443537 PNPLA6Q8IY17 1366 aa9.47□□□□□ -0.89
R3HDM1-210ENST00000443537 NFAT5O94916 1531 aa9.46□□□□□ -0.89
R3HDM1-210ENST00000443537 SHPRHQ149N8 1683 aa9.46□□□□□ -0.89
R3HDM1-210ENST00000443537 PRR20EP86478 221 aa9.46□□□□□ -0.9
R3HDM1-210ENST00000443537 PRR20CP86479 221 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms