RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 ANKIB1Q9P2G1 1089 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 RBM27Q9P2N5 1060 aaKnown RBP12.54□□□□□ -0.4
CALD1-210ENST00000443197 SLC9C2Q5TAH2 1124 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 NBPF5PQ86XG9 351 aaPredicted RBP12.54□□□□□ -0.4
CALD1-210ENST00000443197 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 BECN2A8MW95 431 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 IGKV5-2P06315 115 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 LRRC24Q50LG9 513 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 CREB3L3Q68CJ9 461 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 NAPBQ9H115 298 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 KRT85P78386 507 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 SART3Q15020 963 aaKnown RBP12.53□□□□□ -0.4
CALD1-210ENST00000443197 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 PIGBQ92521 554 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 TAF5LO75529 589 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 ANAPC15P60006 121 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 MAP3K12Q12852 859 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 TCIRG1Q13488 830 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 CAVIN4Q5BKX8 364 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 EPHA10Q5JZY3 1008 aa12.53□□□□□ -0.4
CALD1-210ENST00000443197 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
CALD1-210ENST00000443197 RFC4P35249 363 aa12.52□□□□□ -0.4
CALD1-210ENST00000443197 CCDC73Q6ZRK6 1079 aa12.52□□□□□ -0.4
CALD1-210ENST00000443197 SDF4Q9BRK5 362 aa12.52□□□□□ -0.4
CALD1-210ENST00000443197 JAG2Q9Y219 1238 aa12.52□□□□□ -0.4
CALD1-210ENST00000443197 ZBTB1Q9Y2K1 713 aa12.52□□□□□ -0.4
CALD1-210ENST00000443197 STX6O43752 255 aa12.52□□□□□ -0.41
CALD1-210ENST00000443197 SEC62Q99442 399 aaKnown RBP12.52□□□□□ -0.41
CALD1-210ENST00000443197 PUS3Q9BZE2 481 aaKnown RBP12.52□□□□□ -0.41
CALD1-210ENST00000443197 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.41
CALD1-210ENST00000443197 AK7Q96M32 723 aa12.52□□□□□ -0.41
CALD1-210ENST00000443197 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 CHAMP1Q96JM3 812 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 GOLGA6L19H0YKK7 550 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 PTH1RQ03431 593 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 SPATA32Q96LK8 384 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 SH2B1Q9NRF2 756 aaPredicted RBP12.51□□□□□ -0.41
CALD1-210ENST00000443197 SNX14Q9Y5W7 946 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 ME1P48163 572 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 CAMK4Q16566 473 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
CALD1-210ENST00000443197 SETDB2Q96T68 719 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
CALD1-210ENST00000443197 SASS6Q6UVJ0 657 aa12.51□□□□□ -0.41
CALD1-210ENST00000443197 CDC5LQ99459 802 aaKnown RBP12.51□□□□□ -0.41
CALD1-210ENST00000443197 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
CALD1-210ENST00000443197 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 GNPATO15228 680 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 XAGE2Q96GT9 111 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 GOLGA6L6A8MZA4 724 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 PKP1Q13835 747 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 RAB3GAP1Q15042 981 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 Q6ZUG5 572 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 A0A0D9SFI3 127 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 SASH1O94885 1247 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 STK38Q15208 465 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
CALD1-210ENST00000443197 IFT172Q9UG01 1749 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 FER1L4A9Z1Z3 1794 aa12.5□□□□□ -0.41
CALD1-210ENST00000443197 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
CALD1-210ENST00000443197 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
CALD1-210ENST00000443197 ANKRD18AQ8IVF6 992 aa12.49□□□□□ -0.41
CALD1-210ENST00000443197 UBAC1Q9BSL1 405 aa12.49□□□□□ -0.41
CALD1-210ENST00000443197 PPP1R1BQ9UD71 204 aaPredicted RBP12.49□□□□□ -0.41
CALD1-210ENST00000443197 DBNLQ9UJU6 430 aaKnown RBP12.49□□□□□ -0.41
CALD1-210ENST00000443197 TNS3Q68CZ2 1445 aa12.49□□□□□ -0.41
CALD1-210ENST00000443197 MIGA1Q8NAN2 632 aa12.49□□□□□ -0.41
CALD1-210ENST00000443197 REREQ9P2R6 1566 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 TSPY26PQ9H489 355 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 GOLGA8BA8MQT2 603 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 MICU3Q86XE3 530 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 NLRP3Q96P20 1036 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 RAD50Q92878 1312 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 ADCY9O60503 1353 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 HEG1Q9ULI3 1381 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 CNPY2Q9Y2B0 182 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 RNF113AO15541 343 aaKnown RBP12.48□□□□□ -0.41
CALD1-210ENST00000443197 RANBP6O60518 1105 aaKnown RBP12.48□□□□□ -0.41
CALD1-210ENST00000443197 ARID3AQ99856 593 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 HMG20BQ9P0W2 317 aa12.48□□□□□ -0.41
CALD1-210ENST00000443197 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 USP21Q9UK80 565 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 SLC27A2O14975 620 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 HSPA4P34932 840 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 POLA2Q14181 598 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 RUFY3Q7L099 469 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 PANK2Q9BZ23 570 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 ITSN1Q15811 1721 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 IFIT3O14879 490 aaKnown RBP12.47□□□□□ -0.41
CALD1-210ENST00000443197 MARCH6O60337 910 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 ZAP70P43403 619 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 PTPN12Q05209 780 aaKnown RBP12.47□□□□□ -0.41
CALD1-210ENST00000443197 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 260.2 ms