RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 SHTN1A0MZ66 631 aa8.51□□□□□ -1.05
HDAC6-210ENST00000441703 TEFQ10587 303 aa8.51□□□□□ -1.05
HDAC6-210ENST00000441703 SREBF2Q12772 1141 aa8.51□□□□□ -1.05
HDAC6-210ENST00000441703 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
HDAC6-210ENST00000441703 ZNF790Q6PG37 636 aa8.51□□□□□ -1.05
HDAC6-210ENST00000441703 CDCA5Q96FF9 252 aa8.51□□□□□ -1.05
HDAC6-210ENST00000441703 RBM27Q9P2N5 1060 aaKnown RBP8.51□□□□□ -1.05
HDAC6-210ENST00000441703 TIMELESSQ9UNS1 1208 aa8.51□□□□□ -1.05
HDAC6-210ENST00000441703 CUL9Q8IWT3 2517 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 PRAMEF22A3QJZ6 481 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 PIP4K2AP48426 406 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-210ENST00000441703 FKBP1BP68106 108 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 DPP8Q6V1X1 898 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-210ENST00000441703 OTOP1Q7RTM1 612 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 UBE2Q2Q8WVN8 375 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 DPF2Q92785 391 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 CRAMP1Q96RY5 1269 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 GGA3Q9NZ52 723 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 ZBTB12Q9Y330 459 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-210ENST00000441703 KIF7Q2M1P5 1343 aa8.5□□□□□ -1.05
HDAC6-210ENST00000441703 POLR2AP24928 1970 aaKnown RBP8.5□□□□□ -1.05
HDAC6-210ENST00000441703 ABCC12Q96J65 1359 aa8.49□□□□□ -1.05
HDAC6-210ENST00000441703 RIC1Q4ADV7 1423 aa8.49□□□□□ -1.05
HDAC6-210ENST00000441703 HOXA10P31260 410 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-210ENST00000441703 IL13P35225 146 aa8.49□□□□□ -1.05
HDAC6-210ENST00000441703 TM4SF4P48230 202 aa8.49□□□□□ -1.05
HDAC6-210ENST00000441703 KIAA2012Q0VF49 1180 aa8.49□□□□□ -1.05
HDAC6-210ENST00000441703 MKRN3Q13064 507 aaKnown RBP8.49□□□□□ -1.05
HDAC6-210ENST00000441703 TTLL12Q14166 644 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-210ENST00000441703 SLC4A8Q2Y0W8 1093 aa8.49□□□□□ -1.05
HDAC6-210ENST00000441703 DPF3Q92784 378 aa8.49□□□□□ -1.05
HDAC6-210ENST00000441703 KIAA0100Q14667 2235 aaKnown RBP8.49□□□□□ -1.05
HDAC6-210ENST00000441703 RGL2O15211 777 aa8.48□□□□□ -1.05
HDAC6-210ENST00000441703 ALDH1A1P00352 501 aa8.48□□□□□ -1.05
HDAC6-210ENST00000441703 KIF4BQ2VIQ3 1234 aa8.48□□□□□ -1.05
HDAC6-210ENST00000441703 SLC51AQ86UW1 340 aa8.48□□□□□ -1.05
HDAC6-210ENST00000441703 MPNDQ8N594 471 aa8.48□□□□□ -1.05
HDAC6-210ENST00000441703 ARMC5Q96C12 935 aa8.48□□□□□ -1.05
HDAC6-210ENST00000441703 ERO1AQ96HE7 468 aa8.48□□□□□ -1.05
HDAC6-210ENST00000441703 COL25A1Q9BXS0 654 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-210ENST00000441703 PTPN22Q9Y2R2 807 aa8.48□□□□□ -1.05
HDAC6-210ENST00000441703 ATP6V0A2Q9Y487 856 aa8.48□□□□□ -1.05
HDAC6-210ENST00000441703 A0A0C4DFX4 3053 aa8.47□□□□□ -1.05
HDAC6-210ENST00000441703 PSMD14O00487 310 aa8.47□□□□□ -1.05
HDAC6-210ENST00000441703 RPS12P25398 132 aaKnown RBP8.47□□□□□ -1.05
HDAC6-210ENST00000441703 TCIRG1Q13488 830 aa8.47□□□□□ -1.05
HDAC6-210ENST00000441703 MTHFSDQ2M296 383 aaKnown RBP8.47□□□□□ -1.05
HDAC6-210ENST00000441703 NBPF11Q86T75 865 aa8.47□□□□□ -1.05
HDAC6-210ENST00000441703 CFHR5Q9BXR6 569 aa8.47□□□□□ -1.05
HDAC6-210ENST00000441703 RTFDC1Q9BY42 306 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-210ENST00000441703 PPP4R2Q9NY27 417 aa8.47□□□□□ -1.05
HDAC6-210ENST00000441703 SZT2Q5T011 3432 aa8.47□□□□□ -1.05
HDAC6-210ENST00000441703 MKI67P46013 3256 aaKnown RBP8.46□□□□□ -1.05
HDAC6-210ENST00000441703 UBE2Q2LH0YL09 131 aa8.46□□□□□ -1.06
HDAC6-210ENST00000441703 EGFRP00533 1210 aa8.46□□□□□ -1.06
HDAC6-210ENST00000441703 HMOX1P09601 288 aa8.46□□□□□ -1.06
HDAC6-210ENST00000441703 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
HDAC6-210ENST00000441703 R3HDMLQ9H3Y0 253 aa8.46□□□□□ -1.06
HDAC6-210ENST00000441703 EFCC1Q9HA90 598 aa8.46□□□□□ -1.06
HDAC6-210ENST00000441703 USP16Q9Y5T5 823 aa8.46□□□□□ -1.06
HDAC6-210ENST00000441703 YDJCA8MPS7 323 aa8.45□□□□□ -1.06
HDAC6-210ENST00000441703 ANP32CO43423 234 aa8.45□□□□□ -1.06
HDAC6-210ENST00000441703 NF2P35240 595 aa8.45□□□□□ -1.06
HDAC6-210ENST00000441703 HLFQ16534 295 aa8.45□□□□□ -1.06
HDAC6-210ENST00000441703 ANGEL2Q5VTE6 544 aaKnown RBP8.45□□□□□ -1.06
HDAC6-210ENST00000441703 MOB2Q70IA6 237 aa8.45□□□□□ -1.06
HDAC6-210ENST00000441703 CD99L2Q8TCZ2 262 aa8.45□□□□□ -1.06
HDAC6-210ENST00000441703 NLRP3Q96P20 1036 aa8.45□□□□□ -1.06
HDAC6-210ENST00000441703 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
HDAC6-210ENST00000441703 NOP58Q9Y2X3 529 aaKnown RBP8.45□□□□□ -1.06
HDAC6-210ENST00000441703 LAMB4A4D0S4 1761 aa8.44□□□□□ -1.06
HDAC6-210ENST00000441703 BTBD11A6QL63 1104 aa8.44□□□□□ -1.06
HDAC6-210ENST00000441703 SLC9C1Q4G0N8 1177 aa8.44□□□□□ -1.06
HDAC6-210ENST00000441703 MORC1Q86VD1 984 aa8.44□□□□□ -1.06
HDAC6-210ENST00000441703 SP8Q8IXZ3 490 aa8.44□□□□□ -1.06
HDAC6-210ENST00000441703 ZNF333Q96JL9 665 aa8.44□□□□□ -1.06
HDAC6-210ENST00000441703 DBNDD1Q9H9R9 158 aa8.44□□□□□ -1.06
HDAC6-210ENST00000441703 NR2E3Q9Y5X4 410 aa8.44□□□□□ -1.06
HDAC6-210ENST00000441703 ABCC4O15439 1325 aa8.44□□□□□ -1.06
HDAC6-210ENST00000441703 NUP98P52948 1817 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 A0A1W2PPC1 479 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 BBOX1O75936 387 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 MYCP01106 439 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-210ENST00000441703 SNRPA1P09661 255 aaKnown RBP8.43□□□□□ -1.06
HDAC6-210ENST00000441703 GPTP24298 496 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 DDX10Q13206 875 aaKnown RBP8.43□□□□□ -1.06
HDAC6-210ENST00000441703 ARHGEF6Q15052 776 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 KIF6Q6ZMV9 814 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 NGEFQ8N5V2 710 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 LRCH3Q96II8 777 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 HTATIP2Q9BUP3 242 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 ASTN2O75129 1339 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-210ENST00000441703 CEMIPQ8WUJ3 1361 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 IBTKQ9P2D0 1353 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-210ENST00000441703 ZNF609O15014 1411 aa8.43□□□□□ -1.06
HDAC6-210ENST00000441703 CEP290O15078 2479 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 MANSC4A6NHS7 340 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-210ENST00000441703 GNAT3A8MTJ3 354 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 SOX1O00570 391 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms