RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 CHMP3Q9Y3E7 222 aa26.21■■□□□ 1.79
VPS13B-204ENST00000441350 SF3B3Q15393 1217 aaKnown RBP26.2■■□□□ 1.78
VPS13B-204ENST00000441350 FAM161AQ3B820 660 aa26.2■■□□□ 1.78
VPS13B-204ENST00000441350 COPRSQ9NQ92 184 aa26.2■■□□□ 1.78
VPS13B-204ENST00000441350 RTL9Q8NET4 1388 aa26.19■■□□□ 1.78
VPS13B-204ENST00000441350 NPHP1O15259 732 aa26.19■■□□□ 1.78
VPS13B-204ENST00000441350 PTPN12Q05209 780 aaKnown RBP26.19■■□□□ 1.78
VPS13B-204ENST00000441350 C3orf67Q6ZVT6 689 aa26.19■■□□□ 1.78
VPS13B-204ENST00000441350 CCDC24Q8N4L8 307 aa26.19■■□□□ 1.78
VPS13B-204ENST00000441350 GREM2Q9H772 168 aa26.19■■□□□ 1.78
VPS13B-204ENST00000441350 PARP3Q9Y6F1 533 aa26.19■■□□□ 1.78
VPS13B-204ENST00000441350 SURF6O75683 361 aaKnown RBP26.18■■□□□ 1.78
VPS13B-204ENST00000441350 R3HDM1Q15032 1099 aaKnown RBP26.18■■□□□ 1.78
VPS13B-204ENST00000441350 PA2G4Q9UQ80 394 aaKnown RBP26.18■■□□□ 1.78
VPS13B-204ENST00000441350 EXOC6BQ9Y2D4 811 aa26.18■■□□□ 1.78
VPS13B-204ENST00000441350 ST5P78524 1137 aa26.17■■□□□ 1.78
VPS13B-204ENST00000441350 CCDC57Q2TAC2 916 aa26.17■■□□□ 1.78
VPS13B-204ENST00000441350 NLRP3Q96P20 1036 aa26.17■■□□□ 1.78
VPS13B-204ENST00000441350 CCDC85AQ96PX6 553 aaPredicted RBP26.17■■□□□ 1.78
VPS13B-204ENST00000441350 TNRC6CQ9HCJ0 1690 aaKnown RBP26.17■■□□□ 1.78
VPS13B-204ENST00000441350 IFIT5Q13325 482 aaKnown RBP26.17■■□□□ 1.78
VPS13B-204ENST00000441350 CCDC152Q4G0S7 254 aa26.17■■□□□ 1.78
VPS13B-204ENST00000441350 KLHDC4Q8TBB5 520 aa26.17■■□□□ 1.78
VPS13B-204ENST00000441350 ITGA6P23229 1130 aa26.15■■□□□ 1.78
VPS13B-204ENST00000441350 NUCB1Q02818 461 aa26.15■■□□□ 1.78
VPS13B-204ENST00000441350 HSP90AB4PQ58FF6 505 aa26.14■■□□□ 1.78
VPS13B-204ENST00000441350 PDZRN3Q9UPQ7 1066 aa26.14■■□□□ 1.78
VPS13B-204ENST00000441350 ANKRD18BA2A2Z9 1011 aa26.14■■□□□ 1.77
VPS13B-204ENST00000441350 RAB11FIP3O75154 756 aa26.14■■□□□ 1.77
VPS13B-204ENST00000441350 ZNF594Q96JF6 807 aaPredicted RBP26.13■■□□□ 1.77
VPS13B-204ENST00000441350 ANKRD31Q8N7Z5 1873 aa26.13■■□□□ 1.77
VPS13B-204ENST00000441350 KLRG2A4D1S0 409 aaPredicted RBP26.12■■□□□ 1.77
VPS13B-204ENST00000441350 ANKRD45Q5TZF3 282 aa26.12■■□□□ 1.77
VPS13B-204ENST00000441350 G3BP1Q13283 466 aaKnown RBP eCLIP26.11■■□□□ 1.77
VPS13B-204ENST00000441350 CHD1LQ86WJ1 897 aa26.11■■□□□ 1.77
VPS13B-204ENST00000441350 BRIP1Q9BX63 1249 aa26.11■■□□□ 1.77
VPS13B-204ENST00000441350 MTFR1LQ9H019 292 aa26.11■■□□□ 1.77
VPS13B-204ENST00000441350 SIL1Q9H173 461 aa26.11■■□□□ 1.77
VPS13B-204ENST00000441350 SEC31BQ9NQW1 1179 aa26.11■■□□□ 1.77
VPS13B-204ENST00000441350 CRY2Q49AN0 593 aa26.1■■□□□ 1.77
VPS13B-204ENST00000441350 FBXO3Q9UK99 471 aa26.1■■□□□ 1.77
VPS13B-204ENST00000441350 PSDA5PKW4 1024 aaPredicted RBP26.1■■□□□ 1.77
VPS13B-204ENST00000441350 APBB1O00213 710 aa26.1■■□□□ 1.77
VPS13B-204ENST00000441350 ZBTB7AO95365 584 aa26.1■■□□□ 1.77
VPS13B-204ENST00000441350 LRRCC1Q9C099 1032 aa26.1■■□□□ 1.77
VPS13B-204ENST00000441350 LRP5O75197 1615 aa26.09■■□□□ 1.77
VPS13B-204ENST00000441350 EYA2O00167 538 aa26.09■■□□□ 1.77
VPS13B-204ENST00000441350 CIAO1O76071 339 aa26.09■■□□□ 1.77
VPS13B-204ENST00000441350 OS9Q13438 667 aaPredicted RBP26.09■■□□□ 1.77
VPS13B-204ENST00000441350 TAF7LQ5H9L4 462 aa26.09■■□□□ 1.77
VPS13B-204ENST00000441350 ATG9AQ7Z3C6 839 aa26.09■■□□□ 1.77
VPS13B-204ENST00000441350 ERC1Q8IUD2 1116 aa26.09■■□□□ 1.77
VPS13B-204ENST00000441350 KIF1BPQ96EK5 621 aa26.09■■□□□ 1.77
VPS13B-204ENST00000441350 SASH1O94885 1247 aa26.08■■□□□ 1.77
VPS13B-204ENST00000441350 RHPN1Q8TCX5 695 aa26.08■■□□□ 1.77
VPS13B-204ENST00000441350 COL4A1P02462 1669 aa26.08■■□□□ 1.76
VPS13B-204ENST00000441350 PUS3Q9BZE2 481 aaKnown RBP26.07■■□□□ 1.76
VPS13B-204ENST00000441350 LNPKQ9C0E8 428 aa26.07■■□□□ 1.76
VPS13B-204ENST00000441350 SMARCA5O60264 1052 aaPredicted RBP26.06■■□□□ 1.76
VPS13B-204ENST00000441350 LRRC24Q50LG9 513 aa26.06■■□□□ 1.76
VPS13B-204ENST00000441350 CDC5LQ99459 802 aaKnown RBP26.06■■□□□ 1.76
VPS13B-204ENST00000441350 TAF1P21675 1872 aa26.06■■□□□ 1.76
VPS13B-204ENST00000441350 IL15P40933 162 aaPredicted RBP26.06■■□□□ 1.76
VPS13B-204ENST00000441350 SKAP1Q86WV1 359 aa26.06■■□□□ 1.76
VPS13B-204ENST00000441350 RIPOR2Q9Y4F9 1068 aa26.06■■□□□ 1.76
VPS13B-204ENST00000441350 LDHAL6AQ6ZMR3 332 aa26.05■■□□□ 1.76
VPS13B-204ENST00000441350 ATF5Q9Y2D1 282 aaPredicted RBP26.05■■□□□ 1.76
VPS13B-204ENST00000441350 PDE4AP27815 886 aa26.04■■□□□ 1.76
VPS13B-204ENST00000441350 HOXA10P31260 410 aaPredicted RBP26.04■■□□□ 1.76
VPS13B-204ENST00000441350 PDE6BP35913 854 aa26.04■■□□□ 1.76
VPS13B-204ENST00000441350 DDX46Q7L014 1031 aaKnown RBP26.04■■□□□ 1.76
VPS13B-204ENST00000441350 ZBTB47Q9UFB7 747 aaPredicted RBP26.04■■□□□ 1.76
VPS13B-204ENST00000441350 RPGRQ92834 1020 aaKnown RBP26.03■■□□□ 1.76
VPS13B-204ENST00000441350 CELF1Q92879 486 aaKnown RBP26.03■■□□□ 1.76
VPS13B-204ENST00000441350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.03■■□□□ 1.76
VPS13B-204ENST00000441350 SPEF2Q9C093 1822 aa26.03■■□□□ 1.76
VPS13B-204ENST00000441350 IGHMBP2P38935 993 aaKnown RBP26.03■■□□□ 1.76
VPS13B-204ENST00000441350 ANKRD18AQ8IVF6 992 aa26.03■■□□□ 1.76
VPS13B-204ENST00000441350 IL1RAPL2Q9NP60 686 aa26.03■■□□□ 1.76
VPS13B-204ENST00000441350 C10orf71Q711Q0 1435 aa26.02■■□□□ 1.76
VPS13B-204ENST00000441350 RPS8P62241 208 aaKnown RBP26.02■■□□□ 1.76
VPS13B-204ENST00000441350 MPHOSPH8Q99549 860 aa26.02■■□□□ 1.76
VPS13B-204ENST00000441350 SGIP1Q9BQI5 828 aa26.02■■□□□ 1.76
VPS13B-204ENST00000441350 CNNM1Q9NRU3 951 aa26.02■■□□□ 1.76
VPS13B-204ENST00000441350 SRGNP10124 158 aa26.01■■□□□ 1.75
VPS13B-204ENST00000441350 POLD1P28340 1107 aa26.01■■□□□ 1.75
VPS13B-204ENST00000441350 TFCP2Q12800 502 aa26.01■■□□□ 1.75
VPS13B-204ENST00000441350 COL11A2P13942 1736 aaPredicted RBP26■■□□□ 1.75
VPS13B-204ENST00000441350 C16orf71Q8IYS4 520 aaPredicted RBP26■■□□□ 1.75
VPS13B-204ENST00000441350 RBM17Q96I25 401 aaKnown RBP26■■□□□ 1.75
VPS13B-204ENST00000441350 CRAMP1Q96RY5 1269 aa26■■□□□ 1.75
VPS13B-204ENST00000441350 BSDC1Q9NW68 430 aaPredicted RBP26■■□□□ 1.75
VPS13B-204ENST00000441350 GRAPQ13588 217 aa25.99■■□□□ 1.75
VPS13B-204ENST00000441350 GRAPLQ8TC17 118 aaPredicted RBP25.99■■□□□ 1.75
VPS13B-204ENST00000441350 KIF13BQ9NQT8 1826 aa25.99■■□□□ 1.75
VPS13B-204ENST00000441350 NPR1P16066 1061 aa25.99■■□□□ 1.75
VPS13B-204ENST00000441350 CLASRPQ8N2M8 674 aaKnown RBP25.99■■□□□ 1.75
VPS13B-204ENST00000441350 PTGER2P43116 358 aa25.98■■□□□ 1.75
VPS13B-204ENST00000441350 CEP126Q9P2H0 1117 aa25.98■■□□□ 1.75
VPS13B-204ENST00000441350 MROH5Q6ZUA9 1318 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 502.8 ms