RNA–Protein interactions for RNA: ENST00000434172.2

CKS1BP5-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 5, humanhuman

BASIC

Gene CKS1BP5, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP5-201ENST00000434172 FOXJ1Q92949 421 aa5.24□□□□□ -1.57
CKS1BP5-201ENST00000434172 NUDT16Q96DE0 195 aaKnown RBP5.24□□□□□ -1.57
CKS1BP5-201ENST00000434172 IFT43Q96FT9 208 aa5.24□□□□□ -1.57
CKS1BP5-201ENST00000434172 DNAJC7Q99615 494 aa5.24□□□□□ -1.57
CKS1BP5-201ENST00000434172 CNTN3Q9P232 1028 aa5.24□□□□□ -1.57
CKS1BP5-201ENST00000434172 THRAP3Q9Y2W1 955 aaKnown RBP5.24□□□□□ -1.57
CKS1BP5-201ENST00000434172 MRVI1Q9Y6F6 885 aa5.24□□□□□ -1.57
CKS1BP5-201ENST00000434172 SERTM1A2A2V5 107 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 CCDC85CA6NKD9 419 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 ERVH48-1M5A8F1 160 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 CDK2AP1O14519 115 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 PDPK1O15530 556 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 GNALP38405 381 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 PBX2P40425 430 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 CBLBQ13191 982 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 DGKZQ13574 1117 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 VPS72Q15906 364 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 C8orf34Q49A92 452 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 C2orf27AQ580R0 203 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 INTS6LQ5JSJ4 861 aaKnown RBP5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 PCNX4Q63HM2 1172 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 PTCRAQ6ISU1 281 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 SAMD3Q8N6K7 520 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 ANKRD24Q8TF21 1146 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 THAP3Q8WTV1 239 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 TMEM74Q96NL1 305 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 APBA2Q99767 749 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 SRRTQ9BXP5 876 aaKnown RBP5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 PRDM9Q9NQV7 894 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 ATP8A1Q9Y2Q0 1164 aa5.23□□□□□ -1.57
CKS1BP5-201ENST00000434172 POTEB3A0JP26 581 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 EML1O00423 815 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 RAB15P59190 212 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 PPP4CP60510 307 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 IRX6P78412 446 aaPredicted RBP5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 SQSTM1Q13501 440 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 SAFB2Q14151 953 aaKnown RBP eCLIP5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 TEAD4Q15561 434 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 DDR2Q16832 855 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 ZFYVE27Q5T4F4 411 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 POTEBQ6S5H4 581 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 CCDC24Q8N4L8 307 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 JMYQ8N9B5 988 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 GPR152Q8TDT2 470 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 EPS8L3Q8TE67 593 aaKnown RBP5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 BAP1Q92560 729 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 EVI5LQ96CN4 794 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 ANAPC16Q96DE5 110 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 EAF1Q96JC9 268 aaPredicted RBP5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 GGNBP2Q9H3C7 697 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 KANSL2Q9H9L4 492 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 PPM1HQ9ULR3 514 aa5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 SUPT16HQ9Y5B9 1047 aaKnown RBP5.22□□□□□ -1.57
CKS1BP5-201ENST00000434172 BHMG1C9JSJ3 638 aaPredicted RBP5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 ZPR1O75312 459 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 TNFRSF21O75509 655 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 KRT18P05783 430 aaKnown RBP5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 PAX3P23760 479 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 GBP2P32456 591 aaPredicted RBP5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 DHX9Q08211 1270 aaKnown RBP5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 NFE2Q16621 373 aaPredicted RBP5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 HIF1AQ16665 826 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 TBCELQ5QJ74 424 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 XKR5Q6UX68 686 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 PI16Q6UXB8 463 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 TREML1Q86YW5 311 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 ALDH16A1Q8IZ83 802 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 PGBD3Q8N328 593 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 MRPL50Q8N5N7 158 aaKnown RBP5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 ZNF296Q8WUU4 475 aaPredicted RBP5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 CHAC2Q8WUX2 184 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 NGLY1Q96IV0 654 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 SCYL1Q96KG9 808 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 BCO2Q9BYV7 579 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 MCM8Q9UJA3 840 aa5.21□□□□□ -1.58
CKS1BP5-201ENST00000434172 SMAD7O15105 426 aaKnown RBP5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 KCNQ2O43526 872 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 TSPAN6O43657 245 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 GABBR2O75899 941 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 ADH1BP00325 375 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 CNGA1P29973 690 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 IRS1P35568 1242 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 CCDC85BQ15834 202 aaPredicted RBP5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 LINC01559Q495D7 138 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 MAP9Q49MG5 647 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 BRDTQ58F21 947 aaPredicted RBP5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 C1orf53Q5VUE5 145 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 PDE12Q6L8Q7 609 aaKnown RBP5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 NXPE4Q6UWF7 544 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 NME8Q8N427 588 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 OR6P1Q8NGX9 317 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 ZNF669Q96BR6 464 aaPredicted RBP5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 SHDQ96IW2 340 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 RHOVQ96L33 236 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 ZNF700Q9H0M5 742 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 SUV39H2Q9H5I1 410 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 GNL3LQ9NVN8 582 aaKnown RBP5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 PPP4R2Q9NY27 417 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 MAPK8IP1Q9UQF2 711 aa5.2□□□□□ -1.58
CKS1BP5-201ENST00000434172 FNDC3AQ9Y2H6 1198 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms