RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 RAB11FIP3O75154 756 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 LMAN1P49257 510 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 AKAP4Q5JQC9 854 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 RNF20Q5VTR2 975 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 CCDC191Q8NCU4 936 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 CCDC34Q96HJ3 373 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 RAD50Q92878 1312 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 RTL1A6NKG5 1358 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 ZNF853P0CG23 659 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 SF3A1Q15459 793 aaKnown RBP8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 NBPF6Q5VWK0 638 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 RUFY3Q7L099 469 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 ZSCAN31Q96LW9 406 aaPredicted RBP8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 NBPF4Q96M43 638 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 CHPF2Q9P2E5 772 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 MTMR6Q9Y217 621 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 C3P01024 1663 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 ARHGEF28Q8N1W1 1705 aaKnown RBP8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 SPATA31D1Q6ZQQ2 1576 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 BRPF1P55201 1214 aaPredicted RBP8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 SYCP1Q15431 976 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 TOMM22Q9NS69 142 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 DNAI1Q9UI46 699 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 NPHP3Q7Z494 1330 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 A0A087WWV3 80 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 LARGE1O95461 756 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 CCDC144BQ3MJ40 725 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 CCDC144CPQ8IYA2 1237 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 RASEFQ8IZ41 740 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 AK7Q96M32 723 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 SIL1Q9H173 461 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 RASSF4Q9H2L5 321 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 MYOM1P52179 1685 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 MYO3AQ8NEV4 1616 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 PNMA6EA0A0J9YXQ4 647 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 NEMFO60524 1076 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 PPFIA3O75145 1194 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 SFPQP23246 707 aaKnown RBP eCLIP8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 HSPA4P34932 840 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 CDC37L1Q7L3B6 337 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 TMC6Q7Z403 805 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 TMEM87AQ8NBN3 555 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 PTCH1Q13635 1447 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 KIF2AO00139 706 aaPredicted RBP8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 LRRC8AQ8IWT6 810 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 KIF1BPQ96EK5 621 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 SH2B1Q9NRF2 756 aaPredicted RBP8.66□□□□□ -1.02
SYNPO2-203ENST00000434046 ADAMTS13Q76LX8 1427 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 ME1P48163 572 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 LEKR1Q6ZMV7 388 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 ERC1Q8IUD2 1116 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 CEP57L1Q8IYX8 460 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 IFNL2Q8IZJ0 200 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 TXLNBQ8N3L3 684 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 IL17REQ8NFR9 667 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 ERCC4Q92889 916 aaPredicted RBP8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 PHAXQ9H814 394 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 IGSF1Q8N6C5 1336 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 KIAA0232Q92628 1395 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 GTF2A1P52655 376 aaPredicted RBP8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 SLC39A6Q13433 755 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 NOM1Q5C9Z4 860 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 BLOC1S2Q6QNY1 142 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 PPP1R42Q7Z4L9 355 aa8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.65□□□□□ -1.02
SYNPO2-203ENST00000434046 LMTK3Q96Q04 1460 aa8.65□□□□□ -1.03
SYNPO2-203ENST00000434046 LRRC7Q96NW7 1537 aa8.65□□□□□ -1.03
SYNPO2-203ENST00000434046 PTCD1O75127 700 aaKnown RBP8.65□□□□□ -1.03
SYNPO2-203ENST00000434046 NR1I2O75469 434 aa8.65□□□□□ -1.03
SYNPO2-203ENST00000434046 AOPEPQ8N6M6 819 aa8.65□□□□□ -1.03
SYNPO2-203ENST00000434046 GPATCH11Q8N954 259 aa8.65□□□□□ -1.03
SYNPO2-203ENST00000434046 NAT10Q9H0A0 1025 aaKnown RBP8.65□□□□□ -1.03
SYNPO2-203ENST00000434046 HYPKQ9NX55 129 aa8.65□□□□□ -1.03
SYNPO2-203ENST00000434046 MAP3K2Q9Y2U5 619 aa8.65□□□□□ -1.03
SYNPO2-203ENST00000434046 RAD51AP2Q09MP3 1159 aa8.64□□□□□ -1.03
SYNPO2-203ENST00000434046 NEUROD6Q96NK8 337 aa8.64□□□□□ -1.03
SYNPO2-203ENST00000434046 ZSWIM4Q9H7M6 989 aa8.64□□□□□ -1.03
SYNPO2-203ENST00000434046 RPAP1Q9BWH6 1393 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-203ENST00000434046 BIN1O00499 593 aa8.64□□□□□ -1.03
SYNPO2-203ENST00000434046 LARP1Q6PKG0 1096 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-203ENST00000434046 APPP05067 770 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 PSMA5P28066 241 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 CLCN6P51797 869 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 STX1AQ16623 288 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 AACSQ86V21 672 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 PDILTQ8N807 584 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 DDX17Q92841 729 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 FSD1Q9BTV5 496 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 CLSTN2Q9H4D0 955 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 CPS1P31327 1500 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 SGSM2O43147 1006 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 SEC31AO94979 1220 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 RBM6P78332 1123 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 ATP8B2P98198 1209 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 FUCA2Q9BTY2 467 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 ZCCHC17Q9NP64 241 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 CD163L1Q9NR16 1453 aa8.63□□□□□ -1.03
SYNPO2-203ENST00000434046 RNMTO43148 476 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms