RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 MAP1SQ66K74 1059 aaPredicted RBP28.27■■■□□ 2.12
RPUSD3-206ENST00000433535 DPP8Q6V1X1 898 aaPredicted RBP28.27■■■□□ 2.12
RPUSD3-206ENST00000433535 RTFDC1Q9BY42 306 aaPredicted RBP28.27■■■□□ 2.12
RPUSD3-206ENST00000433535 PHAXQ9H814 394 aaKnown RBP28.27■■■□□ 2.12
RPUSD3-206ENST00000433535 LMOD1P29536 600 aaPredicted RBP28.26■■■□□ 2.11
RPUSD3-206ENST00000433535 MPNDQ8N594 471 aa28.25■■■□□ 2.11
RPUSD3-206ENST00000433535 C8orf58Q8NAV2 365 aa28.25■■■□□ 2.11
RPUSD3-206ENST00000433535 SUPT20HQ8NEM7 779 aa28.25■■■□□ 2.11
RPUSD3-206ENST00000433535 HSPA1AP0DMV8 641 aaKnown RBP28.24■■■□□ 2.11
RPUSD3-206ENST00000433535 HSPA1BP0DMV9 641 aaKnown RBP28.24■■■□□ 2.11
RPUSD3-206ENST00000433535 EPS15P42566 896 aa28.24■■■□□ 2.11
RPUSD3-206ENST00000433535 GOLGA2Q08379 1002 aa28.24■■■□□ 2.11
RPUSD3-206ENST00000433535 RIC3Q7Z5B4 369 aa28.24■■■□□ 2.11
RPUSD3-206ENST00000433535 CNTROBQ8N137 903 aa28.23■■■□□ 2.11
RPUSD3-206ENST00000433535 COL13A1Q5TAT6 717 aaPredicted RBP28.22■■■□□ 2.11
RPUSD3-206ENST00000433535 VPS33BQ9H267 617 aa28.22■■■□□ 2.11
RPUSD3-206ENST00000433535 CNTNAP1P78357 1384 aa28.22■■■□□ 2.11
RPUSD3-206ENST00000433535 KIAA2012Q0VF49 1180 aa28.21■■■□□ 2.11
RPUSD3-206ENST00000433535 CELF1Q92879 486 aaKnown RBP28.21■■■□□ 2.11
RPUSD3-206ENST00000433535 ZNRF3Q9ULT6 936 aa28.21■■■□□ 2.11
RPUSD3-206ENST00000433535 TMEM88BA6NKF7 163 aa28.2■■■□□ 2.1
RPUSD3-206ENST00000433535 IRS4O14654 1257 aaPredicted RBP28.2■■■□□ 2.1
RPUSD3-206ENST00000433535 CXCL9Q07325 125 aa28.2■■■□□ 2.1
RPUSD3-206ENST00000433535 TRIM28Q13263 835 aaKnown RBP28.2■■■□□ 2.1
RPUSD3-206ENST00000433535 SF3B3Q15393 1217 aaKnown RBP28.2■■■□□ 2.1
RPUSD3-206ENST00000433535 TSPYL6Q8N831 410 aa28.2■■■□□ 2.1
RPUSD3-206ENST00000433535 TMC4Q7Z404 712 aa28.19■■■□□ 2.1
RPUSD3-206ENST00000433535 TSR2Q969E8 191 aaKnown RBP28.19■■■□□ 2.1
RPUSD3-206ENST00000433535 MYD88Q99836 296 aa28.19■■■□□ 2.1
RPUSD3-206ENST00000433535 PCNTO95613 3336 aa28.18■■■□□ 2.1
RPUSD3-206ENST00000433535 GPRC5DQ9NZD1 345 aa28.17■■■□□ 2.1
RPUSD3-206ENST00000433535 RAD17O75943 681 aa28.16■■■□□ 2.1
RPUSD3-206ENST00000433535 GMPSP49915 693 aaPredicted RBP28.16■■■□□ 2.1
RPUSD3-206ENST00000433535 CCDC30Q5VVM6 783 aa28.16■■■□□ 2.1
RPUSD3-206ENST00000433535 ZBTB38Q8NAP3 1195 aaPredicted RBP28.16■■■□□ 2.1
RPUSD3-206ENST00000433535 CIAPIN1Q6FI81 312 aa28.15■■■□□ 2.1
RPUSD3-206ENST00000433535 USP50Q70EL3 339 aaPredicted RBP28.15■■■□□ 2.1
RPUSD3-206ENST00000433535 YDJCA8MPS7 323 aa28.14■■■□□ 2.1
RPUSD3-206ENST00000433535 FMR1Q06787 632 aaKnown RBP eCLIP28.14■■■□□ 2.1
RPUSD3-206ENST00000433535 JARID2Q92833 1246 aaPredicted RBP28.14■■■□□ 2.1
RPUSD3-206ENST00000433535 NSFL1CQ9UNZ2 370 aaKnown RBP28.14■■■□□ 2.1
RPUSD3-206ENST00000433535 GPSM2P81274 684 aa28.13■■■□□ 2.09
RPUSD3-206ENST00000433535 WWC1Q8IX03 1113 aa28.13■■■□□ 2.09
RPUSD3-206ENST00000433535 ADARB2Q9NS39 739 aaKnown RBP28.13■■■□□ 2.09
RPUSD3-206ENST00000433535 VEGFBP49765 207 aa28.12■■■□□ 2.09
RPUSD3-206ENST00000433535 CCDC191Q8NCU4 936 aa28.12■■■□□ 2.09
RPUSD3-206ENST00000433535 METTL22Q9BUU2 404 aaPredicted RBP28.12■■■□□ 2.09
RPUSD3-206ENST00000433535 MRS2Q9HD23 443 aa28.12■■■□□ 2.09
RPUSD3-206ENST00000433535 DDX58O95786 925 aaKnown RBP28.11■■■□□ 2.09
RPUSD3-206ENST00000433535 CCDC27Q2M243 656 aa28.11■■■□□ 2.09
RPUSD3-206ENST00000433535 BCL2L13Q9BXK5 485 aa28.11■■■□□ 2.09
RPUSD3-206ENST00000433535 SEC31BQ9NQW1 1179 aa28.11■■■□□ 2.09
RPUSD3-206ENST00000433535 CWC25Q9NXE8 425 aaPredicted RBP28.11■■■□□ 2.09
RPUSD3-206ENST00000433535 MAP3K2Q9Y2U5 619 aa28.11■■■□□ 2.09
RPUSD3-206ENST00000433535 TRAF5O00463 557 aa28.1■■■□□ 2.09
RPUSD3-206ENST00000433535 PCCAP05165 728 aaPredicted RBP28.1■■■□□ 2.09
RPUSD3-206ENST00000433535 WASHC4Q2M389 1173 aa28.1■■■□□ 2.09
RPUSD3-206ENST00000433535 GPR101Q96P66 508 aaPredicted RBP28.1■■■□□ 2.09
RPUSD3-206ENST00000433535 DBNDD1Q9H9R9 158 aa28.1■■■□□ 2.09
RPUSD3-206ENST00000433535 POLLQ9UGP5 575 aa28.1■■■□□ 2.09
RPUSD3-206ENST00000433535 C6orf229H3BNL8 230 aa28.09■■■□□ 2.09
RPUSD3-206ENST00000433535 RIMBP2O15034 1052 aa28.09■■■□□ 2.09
RPUSD3-206ENST00000433535 RPS8P62241 208 aaKnown RBP28.09■■■□□ 2.09
RPUSD3-206ENST00000433535 TNIP1Q15025 636 aa28.09■■■□□ 2.09
RPUSD3-206ENST00000433535 CCDC85AQ96PX6 553 aaPredicted RBP28.09■■■□□ 2.09
RPUSD3-206ENST00000433535 ABT1Q9ULW3 272 aaKnown RBP28.09■■■□□ 2.09
RPUSD3-206ENST00000433535 CDHR2Q9BYE9 1310 aa28.09■■■□□ 2.09
RPUSD3-206ENST00000433535 TRPM7Q96QT4 1865 aa28.08■■■□□ 2.09
RPUSD3-206ENST00000433535 SHTN1A0MZ66 631 aa28.08■■■□□ 2.09
RPUSD3-206ENST00000433535 RASSF10A6NK89 507 aa28.08■■■□□ 2.09
RPUSD3-206ENST00000433535 CHMP4AQ9BY43 222 aa28.08■■■□□ 2.09
RPUSD3-206ENST00000433535 STK31Q9BXU1 1019 aa28.07■■■□□ 2.08
RPUSD3-206ENST00000433535 PI4KAP2A4QPH2 592 aa28.06■■■□□ 2.08
RPUSD3-206ENST00000433535 PDE8AO60658 829 aa28.06■■■□□ 2.08
RPUSD3-206ENST00000433535 HSP90B1P14625 803 aaKnown RBP28.06■■■□□ 2.08
RPUSD3-206ENST00000433535 TWISTNBQ3B726 338 aaPredicted RBP28.06■■■□□ 2.08
RPUSD3-206ENST00000433535 CCDC152Q4G0S7 254 aa28.06■■■□□ 2.08
RPUSD3-206ENST00000433535 TNS4Q8IZW8 715 aa28.06■■■□□ 2.08
RPUSD3-206ENST00000433535 PI4KAP1Q8N8J0 262 aa28.06■■■□□ 2.08
RPUSD3-206ENST00000433535 ANP32CO43423 234 aa28.05■■■□□ 2.08
RPUSD3-206ENST00000433535 DEFB115Q30KQ5 88 aa28.05■■■□□ 2.08
RPUSD3-206ENST00000433535 KSR2Q6VAB6 950 aa28.05■■■□□ 2.08
RPUSD3-206ENST00000433535 TBC1D16Q8TBP0 767 aa28.05■■■□□ 2.08
RPUSD3-206ENST00000433535 TRPM4Q8TD43 1214 aa28.05■■■□□ 2.08
RPUSD3-206ENST00000433535 ZBTB12Q9Y330 459 aaPredicted RBP28.05■■■□□ 2.08
RPUSD3-206ENST00000433535 ZNF316A6NFI3 1004 aaPredicted RBP28.04■■■□□ 2.08
RPUSD3-206ENST00000433535 PSMD14O00487 310 aa28.04■■■□□ 2.08
RPUSD3-206ENST00000433535 ECE2O60344 883 aa28.04■■■□□ 2.08
RPUSD3-206ENST00000433535 IGKV5-2P06315 115 aa28.04■■■□□ 2.08
RPUSD3-206ENST00000433535 DOK7Q18PE1 504 aa28.04■■■□□ 2.08
RPUSD3-206ENST00000433535 G2E3Q7L622 706 aa28.04■■■□□ 2.08
RPUSD3-206ENST00000433535 CNOT7Q9UIV1 285 aaKnown RBP28.04■■■□□ 2.08
RPUSD3-206ENST00000433535 IL16Q14005 1332 aa28.03■■■□□ 2.08
RPUSD3-206ENST00000433535 FOXN1O15353 648 aa28.03■■■□□ 2.08
RPUSD3-206ENST00000433535 HIRAP54198 1017 aaPredicted RBP28.03■■■□□ 2.08
RPUSD3-206ENST00000433535 MICALL2Q8IY33 904 aa28.03■■■□□ 2.08
RPUSD3-206ENST00000433535 EYA3Q99504 573 aa28.03■■■□□ 2.08
RPUSD3-206ENST00000433535 SCN9AQ15858 1988 aa28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 MYH3P11055 1940 aa28.02■■■□□ 2.08
RPUSD3-206ENST00000433535 RTL9Q8NET4 1388 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms