RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 NOS3P29474 1203 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L24Q0WX57 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 PTK7Q13308 1070 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 MSL1Q68DK7 614 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 ILDR2Q71H61 639 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 ZNF594Q96JF6 807 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 SUSD3Q96L08 255 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 PNMA5Q96PV4 448 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 DNAJB12Q9NXW2 375 aaKnown RBP5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 KIAA1024Q9UPX6 916 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 PPP1R15AO75807 674 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 TAL1P17542 331 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 FSTP19883 344 aa5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 EPHA4P54764 986 aa5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 SEC13P55735 322 aa5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 PSMA6P60900 246 aaKnown RBP5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 TYRO3Q06418 890 aa5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 FZD5Q13467 585 aa5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 HIF1AQ16665 826 aa5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 CRTC2Q53ET0 693 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 ANKMY2Q8IV38 441 aa5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 HSH2DQ96JZ2 352 aa5.55□□□□□ -1.52
HMGB1P9-201ENST00000429856 ARID1BQ8NFD5 2236 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 ATG7O95352 703 aa5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 ELOAQ14241 798 aaKnown RBP5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 SH3PXD2AQ5TCZ1 1133 aa5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 WFDC8Q8IUA0 241 aa5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 ZNF280CQ8ND82 737 aa5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 PHACTR1Q9C0D0 580 aa5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 RNF114Q9Y508 228 aa5.54□□□□□ -1.52
HMGB1P9-201ENST00000429856 PTCD1O75127 700 aaKnown RBP5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 DKK1O94907 266 aa5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 CD97P48960 835 aa5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 HIRAP54198 1017 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 SRPK2P78362 688 aaKnown RBP5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 DPYDQ12882 1025 aa5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 CCINQ13939 588 aa5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 FAM200AQ8TCP9 573 aa5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 MEGF10Q96KG7 1140 aa5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P9-201ENST00000429856 CDCA8Q53HL2 280 aa5.52□□□□□ -1.53
HMGB1P9-201ENST00000429856 BTLAQ7Z6A9 289 aa5.52□□□□□ -1.53
HMGB1P9-201ENST00000429856 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
HMGB1P9-201ENST00000429856 GSX2Q9BZM3 304 aa5.52□□□□□ -1.53
HMGB1P9-201ENST00000429856 AKTIPQ9H8T0 292 aa5.52□□□□□ -1.53
HMGB1P9-201ENST00000429856 FRRS1LQ9P0K9 344 aa5.52□□□□□ -1.53
HMGB1P9-201ENST00000429856 NOVA2Q9UNW9 492 aaKnown RBP5.52□□□□□ -1.53
HMGB1P9-201ENST00000429856 GSC2O15499 205 aa5.51□□□□□ -1.53
HMGB1P9-201ENST00000429856 ELMSAN1Q6PJG2 1045 aa5.51□□□□□ -1.53
HMGB1P9-201ENST00000429856 DZIP1LQ8IYY4 767 aaKnown RBP5.51□□□□□ -1.53
HMGB1P9-201ENST00000429856 TMEM130Q8N3G9 435 aa5.51□□□□□ -1.53
HMGB1P9-201ENST00000429856 GAS2L2Q8NHY3 880 aa5.51□□□□□ -1.53
HMGB1P9-201ENST00000429856 TTC9Q92623 222 aa5.51□□□□□ -1.53
HMGB1P9-201ENST00000429856 NAGPAQ9UK23 515 aa5.51□□□□□ -1.53
HMGB1P9-201ENST00000429856 ACIN1Q9UKV3 1341 aaKnown RBP5.5□□□□□ -1.53
HMGB1P9-201ENST00000429856 CPB1P15086 417 aa5.5□□□□□ -1.53
HMGB1P9-201ENST00000429856 NFKB1P19838 968 aa5.5□□□□□ -1.53
HMGB1P9-201ENST00000429856 GP2P55259 537 aaKnown RBP5.5□□□□□ -1.53
HMGB1P9-201ENST00000429856 SWI5Q1ZZU3 235 aa5.5□□□□□ -1.53
HMGB1P9-201ENST00000429856 TSEN2Q8NCE0 465 aaKnown RBP5.5□□□□□ -1.53
HMGB1P9-201ENST00000429856 ARID3AQ99856 593 aa5.5□□□□□ -1.53
HMGB1P9-201ENST00000429856 OAS3Q9Y6K5 1087 aaKnown RBP5.5□□□□□ -1.53
HMGB1P9-201ENST00000429856 PPP1R12BO60237 982 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 MAP3K6O95382 1288 aa5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 ARID4AP29374 1257 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 POTEAQ6S8J7 498 aa5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 ALDH16A1Q8IZ83 802 aa5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 DCAF11Q8TEB1 546 aa5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 HINFPQ9BQA5 517 aa5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 MRPL18Q9H0U6 180 aaKnown RBP5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 TSPAN10Q9H1Z9 355 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 PODXL2Q9NZ53 605 aa5.49□□□□□ -1.53
HMGB1P9-201ENST00000429856 DLL1O00548 723 aa5.48□□□□□ -1.53
HMGB1P9-201ENST00000429856 EPB42P16452 691 aa5.48□□□□□ -1.53
HMGB1P9-201ENST00000429856 IGFBP4P22692 258 aa5.48□□□□□ -1.53
HMGB1P9-201ENST00000429856 GRIK5Q16478 980 aa5.48□□□□□ -1.53
HMGB1P9-201ENST00000429856 PERM1Q5SV97 790 aa5.48□□□□□ -1.53
HMGB1P9-201ENST00000429856 STAG2Q8N3U4 1231 aa5.48□□□□□ -1.53
HMGB1P9-201ENST00000429856 LPIN3Q9BQK8 851 aa5.48□□□□□ -1.53
HMGB1P9-201ENST00000429856 STOML1Q9UBI4 398 aa5.48□□□□□ -1.53
HMGB1P9-201ENST00000429856 ZMIZ1Q9ULJ6 1067 aa5.48□□□□□ -1.53
HMGB1P9-201ENST00000429856 KIAA1324LA8MWY0 1029 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 DEAF1O75398 565 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 ALX3O95076 343 aa5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 IGLV1-40P01703 118 aa5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 GRIK1P39086 918 aa5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 TRIM26Q12899 539 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 IER5Q5VY09 327 aa5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 INTS5Q6P9B9 1019 aaKnown RBP5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 STK32AQ8WU08 396 aa5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 RAXQ9Y2V3 346 aa5.47□□□□□ -1.53
HMGB1P9-201ENST00000429856 ATAD2Q6PL18 1390 aa5.46□□□□□ -1.54
HMGB1P9-201ENST00000429856 FOXO3O43524 673 aa5.46□□□□□ -1.54
HMGB1P9-201ENST00000429856 MED26O95402 600 aa5.46□□□□□ -1.54
HMGB1P9-201ENST00000429856 PDE4CQ08493 712 aa5.46□□□□□ -1.54
HMGB1P9-201ENST00000429856 TMEM164Q5U3C3 297 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms