RNA–Protein interactions for RNA: ENST00000428695.5

SATB2-203, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene SATB2, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-203ENST00000428695 HMG20BQ9P0W2 317 aa21.37■■□□□ 1.01
SATB2-203ENST00000428695 ATG9AQ7Z3C6 839 aa21.37■■□□□ 1.01
SATB2-203ENST00000428695 CCDC83Q8IWF9 413 aa21.37■■□□□ 1.01
SATB2-203ENST00000428695 GPR108Q9NPR9 543 aa21.37■■□□□ 1.01
SATB2-203ENST00000428695 TMEM63CQ9P1W3 806 aa21.37■■□□□ 1.01
SATB2-203ENST00000428695 STX6O43752 255 aa21.36■■□□□ 1.01
SATB2-203ENST00000428695 ZSCAN22P10073 491 aaPredicted RBP21.36■■□□□ 1.01
SATB2-203ENST00000428695 DNAJC2Q99543 621 aaKnown RBP21.36■■□□□ 1.01
SATB2-203ENST00000428695 NSFL1CQ9UNZ2 370 aaKnown RBP21.36■■□□□ 1.01
SATB2-203ENST00000428695 TAF5LO75529 589 aa21.35■■□□□ 1.01
SATB2-203ENST00000428695 SYT1P21579 422 aa21.35■■□□□ 1.01
SATB2-203ENST00000428695 ZNF609O15014 1411 aa21.35■■□□□ 1.01
SATB2-203ENST00000428695 IL15P40933 162 aaPredicted RBP21.35■■□□□ 1.01
SATB2-203ENST00000428695 SPEF2Q9C093 1822 aa21.34■■□□□ 1.01
SATB2-203ENST00000428695 COL14A1Q05707 1796 aaKnown RBP21.34■■□□□ 1.01
SATB2-203ENST00000428695 TSGA10IPQ3SY00 556 aa21.34■■□□□ 1.01
SATB2-203ENST00000428695 USPL1Q5W0Q7 1092 aa21.34■■□□□ 1.01
SATB2-203ENST00000428695 BLOC1S2Q6QNY1 142 aa21.34■■□□□ 1.01
SATB2-203ENST00000428695 ISCA1Q9BUE6 129 aa21.34■■□□□ 1.01
SATB2-203ENST00000428695 NDUFB9Q9Y6M9 179 aa21.34■■□□□ 1.01
SATB2-203ENST00000428695 ME3Q16798 604 aa21.34■■□□□ 1.01
SATB2-203ENST00000428695 TEX13AQ9BXU3 409 aaPredicted RBP21.34■■□□□ 1.01
SATB2-203ENST00000428695 RRAGDQ9NQL2 400 aaPredicted RBP21.34■■□□□ 1.01
SATB2-203ENST00000428695 ATG3Q9NT62 314 aa21.34■■□□□ 1.01
SATB2-203ENST00000428695 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.34■■□□□ 1.01
SATB2-203ENST00000428695 GJB2P29033 226 aa21.33■■□□□ 1.01
SATB2-203ENST00000428695 ANKRD1Q15327 319 aa21.33■■□□□ 1.01
SATB2-203ENST00000428695 FOXD4L6Q3SYB3 417 aaPredicted RBP21.33■■□□□ 1.01
SATB2-203ENST00000428695 FOXD4L3Q6VB84 417 aaPredicted RBP21.33■■□□□ 1.01
SATB2-203ENST00000428695 VSIG10Q8N0Z9 540 aa21.33■■□□□ 1.01
SATB2-203ENST00000428695 TMEM87AQ8NBN3 555 aa21.33■■□□□ 1.01
SATB2-203ENST00000428695 ALDH8A1Q9H2A2 487 aaPredicted RBP21.33■■□□□ 1.01
SATB2-203ENST00000428695 KAT6BQ8WYB5 2073 aa21.33■■□□□ 1
SATB2-203ENST00000428695 PALLDQ8WX93 1383 aa21.33■■□□□ 1
SATB2-203ENST00000428695 PLCH1Q4KWH8 1693 aa21.32■■□□□ 1
SATB2-203ENST00000428695 EYA2O00167 538 aa21.32■■□□□ 1
SATB2-203ENST00000428695 ST3GAL1Q11201 340 aa21.32■■□□□ 1
SATB2-203ENST00000428695 TPCN1Q9ULQ1 816 aa21.32■■□□□ 1
SATB2-203ENST00000428695 CIAO1O76071 339 aa21.32■■□□□ 1
SATB2-203ENST00000428695 F13A1P00488 732 aa21.32■■□□□ 1
SATB2-203ENST00000428695 RPS6KB1P23443 525 aa21.32■■□□□ 1
SATB2-203ENST00000428695 CCDC173Q0VFZ6 552 aa21.32■■□□□ 1
SATB2-203ENST00000428695 TCIRG1Q13488 830 aa21.32■■□□□ 1
SATB2-203ENST00000428695 LRSAM1Q6UWE0 723 aa21.32■■□□□ 1
SATB2-203ENST00000428695 DDX46Q7L014 1031 aaKnown RBP21.32■■□□□ 1
SATB2-203ENST00000428695 USP48Q86UV5 1035 aa21.32■■□□□ 1
SATB2-203ENST00000428695 KBTBD3Q8NAB2 608 aa21.32■■□□□ 1
SATB2-203ENST00000428695 NEUROD6Q96NK8 337 aa21.32■■□□□ 1
SATB2-203ENST00000428695 LAMA4Q16363 1823 aa21.32■■□□□ 1
SATB2-203ENST00000428695 PRIM1P49642 420 aaKnown RBP21.31■■□□□ 1
SATB2-203ENST00000428695 KRT32Q14532 448 aa21.31■■□□□ 1
SATB2-203ENST00000428695 MCMDC2Q4G0Z9 681 aa21.31■■□□□ 1
SATB2-203ENST00000428695 PIGBQ92521 554 aa21.31■■□□□ 1
SATB2-203ENST00000428695 ANP32BQ92688 251 aaKnown RBP21.31■■□□□ 1
SATB2-203ENST00000428695 BTG4Q9NY30 223 aa21.31■■□□□ 1
SATB2-203ENST00000428695 ATP6V1DQ9Y5K8 247 aa21.31■■□□□ 1
SATB2-203ENST00000428695 TAF6LQ9Y6J9 622 aa21.31■■□□□ 1
SATB2-203ENST00000428695 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
SATB2-203ENST00000428695 SYAP1Q96A49 352 aaPredicted RBP21.31■■□□□ 1
SATB2-203ENST00000428695 GDPD2Q9HCC8 539 aa21.31■■□□□ 1
SATB2-203ENST00000428695 ASAP1Q9ULH1 1129 aa21.31■■□□□ 1
SATB2-203ENST00000428695 SH3TC1Q8TE82 1336 aa21.3■■□□□ 1
SATB2-203ENST00000428695 WNK3Q9BYP7 1800 aa21.3■■□□□ 1
SATB2-203ENST00000428695 LRRC24Q50LG9 513 aa21.3■■□□□ 1
SATB2-203ENST00000428695 KIF6Q6ZMV9 814 aa21.3■■□□□ 1
SATB2-203ENST00000428695 TICAM2Q86XR7 235 aa21.3■■□□□ 1
SATB2-203ENST00000428695 DNAJC10Q8IXB1 793 aa21.3■■□□□ 1
SATB2-203ENST00000428695 ZNF594Q96JF6 807 aaPredicted RBP21.3■■□□□ 1
SATB2-203ENST00000428695 U3KPZ7 1027 aaPredicted RBP21.3■■□□□ 1
SATB2-203ENST00000428695 LRP6O75581 1613 aa21.3■■□□□ 1
SATB2-203ENST00000428695 DISP2A7MBM2 1401 aa21.3■■□□□ 1
SATB2-203ENST00000428695 SYCE3A1L190 88 aa21.29■■□□□ 1
SATB2-203ENST00000428695 TRIM28Q13263 835 aaKnown RBP21.29■■□□□ 1
SATB2-203ENST00000428695 COL9A3Q14050 684 aaPredicted RBP21.29■■□□□ 1
SATB2-203ENST00000428695 PPP1R9BQ96SB3 815 aa21.29■■□□□ 1
SATB2-203ENST00000428695 RBSNQ9H1K0 784 aa21.29■■□□□ 1
SATB2-203ENST00000428695 ZNF330Q9Y3S2 320 aaPredicted RBP21.29■■□□□ 1
SATB2-203ENST00000428695 CCDC9Q9Y3X0 531 aaKnown RBP21.29■■□□□ 1
SATB2-203ENST00000428695 MYH3P11055 1940 aa21.29■■□□□ 1
SATB2-203ENST00000428695 TIMM10P62072 90 aa21.29■■□□□ 1
SATB2-203ENST00000428695 NECAB1Q8N987 351 aa21.29■■□□□ 1
SATB2-203ENST00000428695 TRIM44Q96DX7 344 aaPredicted RBP21.29■■□□□ 1
SATB2-203ENST00000428695 PAG1Q9NWQ8 432 aa21.29■■□□□ 1
SATB2-203ENST00000428695 GADD45BO75293 160 aaPredicted RBP21.28■■□□□ 1
SATB2-203ENST00000428695 STARD3NLO95772 234 aa21.28■■□□□ 1
SATB2-203ENST00000428695 CCDC129Q6ZRS4 1044 aa21.28■■□□□ 1
SATB2-203ENST00000428695 MTMR6Q9Y217 621 aa21.28■■□□□ 1
SATB2-203ENST00000428695 CNPY2Q9Y2B0 182 aa21.28■■□□□ 1
SATB2-203ENST00000428695 CHGBP05060 677 aa21.28■■□□□ 1
SATB2-203ENST00000428695 TOB2Q14106 344 aaPredicted RBP21.28■■□□□ 1
SATB2-203ENST00000428695 SEC62Q99442 399 aaKnown RBP21.28■■□□□ 1
SATB2-203ENST00000428695 GOLIM4O00461 696 aa21.27■■□□□ 1
SATB2-203ENST00000428695 TCEANC2Q96MN5 208 aa21.27■■□□□ 1
SATB2-203ENST00000428695 A0A1B0GUL7 405 aa21.26■□□□□ 0.99
SATB2-203ENST00000428695 PCCAP05165 728 aaPredicted RBP21.26■□□□□ 0.99
SATB2-203ENST00000428695 CCDC57Q2TAC2 916 aa21.26■□□□□ 0.99
SATB2-203ENST00000428695 HELLSQ9NRZ9 838 aa21.26■□□□□ 0.99
SATB2-203ENST00000428695 FBXO3Q9UK99 471 aa21.26■□□□□ 0.99
SATB2-203ENST00000428695 PDIA4P13667 645 aaKnown RBP21.26■□□□□ 0.99
SATB2-203ENST00000428695 PLA2G12BQ9BX93 195 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms