RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
NR1I3-209ENST00000428574 MYH3P11055 1940 aa11.14□□□□□ -0.63
NR1I3-209ENST00000428574 EYA2O00167 538 aa11.14□□□□□ -0.63
NR1I3-209ENST00000428574 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
NR1I3-209ENST00000428574 SUSD4Q5VX71 490 aa11.14□□□□□ -0.63
NR1I3-209ENST00000428574 SETDB2Q96T68 719 aa11.14□□□□□ -0.63
NR1I3-209ENST00000428574 BCL2L12Q9HB09 334 aa11.14□□□□□ -0.63
NR1I3-209ENST00000428574 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
NR1I3-209ENST00000428574 QSER1Q2KHR3 1735 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
NR1I3-209ENST00000428574 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 GLRX3O76003 335 aaKnown RBP11.13□□□□□ -0.63
NR1I3-209ENST00000428574 SASH1O94885 1247 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
NR1I3-209ENST00000428574 USPL1Q5W0Q7 1092 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 TPTE2Q6XPS3 522 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 PROM2Q8N271 834 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
NR1I3-209ENST00000428574 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
NR1I3-209ENST00000428574 CDC45O75419 566 aa11.12□□□□□ -0.63
NR1I3-209ENST00000428574 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
NR1I3-209ENST00000428574 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
NR1I3-209ENST00000428574 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
NR1I3-209ENST00000428574 PA2G4Q9UQ80 394 aaKnown RBP11.12□□□□□ -0.63
NR1I3-209ENST00000428574 ZNF609O15014 1411 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 APBB1O00213 710 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 EPB41L2O43491 1005 aaKnown RBP11.11□□□□□ -0.63
NR1I3-209ENST00000428574 SMARCA5O60264 1052 aaPredicted RBP11.11□□□□□ -0.63
NR1I3-209ENST00000428574 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
NR1I3-209ENST00000428574 ITGA6P23229 1130 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 KCNQ4P56696 695 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 TBC1D9BQ66K14 1250 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 ATG9AQ7Z3C6 839 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
NR1I3-209ENST00000428574 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
NR1I3-209ENST00000428574 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
NR1I3-209ENST00000428574 MROH5Q6ZUA9 1318 aa11.1□□□□□ -0.63
NR1I3-209ENST00000428574 TUBGCP6Q96RT7 1819 aa11.1□□□□□ -0.63
NR1I3-209ENST00000428574 GYS1P13807 737 aa11.1□□□□□ -0.63
NR1I3-209ENST00000428574 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
NR1I3-209ENST00000428574 NBPF5PQ86XG9 351 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-209ENST00000428574 C16orf71Q8IYS4 520 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-209ENST00000428574 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
NR1I3-209ENST00000428574 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
NR1I3-209ENST00000428574 CAMKK2Q96RR4 588 aa11.1□□□□□ -0.63
NR1I3-209ENST00000428574 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
NR1I3-209ENST00000428574 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
NR1I3-209ENST00000428574 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-209ENST00000428574 TM4SF1P30408 202 aa11.09□□□□□ -0.63
NR1I3-209ENST00000428574 BAG6P46379 1132 aa11.09□□□□□ -0.63
NR1I3-209ENST00000428574 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
NR1I3-209ENST00000428574 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
NR1I3-209ENST00000428574 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-209ENST00000428574 AACSQ86V21 672 aa11.09□□□□□ -0.63
NR1I3-209ENST00000428574 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
NR1I3-209ENST00000428574 OTUD7AQ8TE49 926 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-209ENST00000428574 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
NR1I3-209ENST00000428574 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-209ENST00000428574 SIL1Q9H173 461 aa11.09□□□□□ -0.63
NR1I3-209ENST00000428574 GREM2Q9H772 168 aa11.09□□□□□ -0.63
NR1I3-209ENST00000428574 SRP68Q9UHB9 627 aaKnown RBP11.09□□□□□ -0.63
NR1I3-209ENST00000428574 RIPOR2Q9Y4F9 1068 aa11.09□□□□□ -0.63
NR1I3-209ENST00000428574 SPEF2Q9C093 1822 aa11.08□□□□□ -0.64
NR1I3-209ENST00000428574 ATP5JP18859 108 aa11.08□□□□□ -0.64
NR1I3-209ENST00000428574 SDSP20132 328 aa11.08□□□□□ -0.64
NR1I3-209ENST00000428574 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-209ENST00000428574 TFCP2Q12800 502 aa11.08□□□□□ -0.64
NR1I3-209ENST00000428574 LDHAL6AQ6ZMR3 332 aa11.08□□□□□ -0.64
NR1I3-209ENST00000428574 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
NR1I3-209ENST00000428574 CNTROBQ8N137 903 aa11.08□□□□□ -0.64
NR1I3-209ENST00000428574 EAF2Q96CJ1 260 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-209ENST00000428574 ZNF512BQ96KM6 892 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-209ENST00000428574 NLRP3Q96P20 1036 aa11.08□□□□□ -0.64
NR1I3-209ENST00000428574 TFCP2L1Q9NZI6 479 aa11.08□□□□□ -0.64
NR1I3-209ENST00000428574 NRXN2Q9P2S2 1712 aa11.07□□□□□ -0.64
NR1I3-209ENST00000428574 HIP1O00291 1037 aa11.07□□□□□ -0.64
NR1I3-209ENST00000428574 PHF14O94880 888 aa11.07□□□□□ -0.64
NR1I3-209ENST00000428574 HCLS1P14317 486 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-209ENST00000428574 IGHMBP2P38935 993 aaKnown RBP11.07□□□□□ -0.64
NR1I3-209ENST00000428574 NFIXQ14938 502 aa11.07□□□□□ -0.64
NR1I3-209ENST00000428574 ERFEQ4G0M1 354 aa11.07□□□□□ -0.64
NR1I3-209ENST00000428574 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
NR1I3-209ENST00000428574 SYNE4Q8N205 404 aa11.07□□□□□ -0.64
NR1I3-209ENST00000428574 CNBD1Q8NA66 436 aa11.07□□□□□ -0.64
NR1I3-209ENST00000428574 KLHDC4Q8TBB5 520 aa11.07□□□□□ -0.64
NR1I3-209ENST00000428574 REC8O95072 547 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 PDE8BO95263 885 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 ST5P78524 1137 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 ZNF827Q17R98 1081 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 VGLL2Q8N8G2 317 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 EVI5LQ96CN4 794 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms