RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 BRPF1P55201 1214 aaPredicted RBP17.95■□□□□ 0.46
VEGFB-202ENST00000426086 KIAA2012Q0VF49 1180 aa17.95■□□□□ 0.46
VEGFB-202ENST00000426086 HHIPL1Q96JK4 782 aa17.95■□□□□ 0.46
VEGFB-202ENST00000426086 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
VEGFB-202ENST00000426086 UTP14AQ9BVJ6 771 aaKnown RBP17.95■□□□□ 0.46
VEGFB-202ENST00000426086 VPS33BQ9H267 617 aa17.95■□□□□ 0.46
VEGFB-202ENST00000426086 HCLS1P14317 486 aaPredicted RBP17.94■□□□□ 0.46
VEGFB-202ENST00000426086 DGKZQ13574 1117 aa17.94■□□□□ 0.46
VEGFB-202ENST00000426086 PARP10Q53GL7 1025 aa17.94■□□□□ 0.46
VEGFB-202ENST00000426086 DPP8Q6V1X1 898 aaPredicted RBP17.94■□□□□ 0.46
VEGFB-202ENST00000426086 SP8Q8IXZ3 490 aa17.94■□□□□ 0.46
VEGFB-202ENST00000426086 MPNDQ8N594 471 aa17.94■□□□□ 0.46
VEGFB-202ENST00000426086 ZNF428Q96B54 188 aa17.94■□□□□ 0.46
VEGFB-202ENST00000426086 EIF2S2P20042 333 aaKnown RBP17.93■□□□□ 0.46
VEGFB-202ENST00000426086 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
VEGFB-202ENST00000426086 SUPT20HQ8NEM7 779 aa17.93■□□□□ 0.46
VEGFB-202ENST00000426086 BCL2L13Q9BXK5 485 aa17.93■□□□□ 0.46
VEGFB-202ENST00000426086 CNOT7Q9UIV1 285 aaKnown RBP17.93■□□□□ 0.46
VEGFB-202ENST00000426086 ZBTB12Q9Y330 459 aaPredicted RBP17.93■□□□□ 0.46
VEGFB-202ENST00000426086 ERBB4Q15303 1308 aa17.93■□□□□ 0.46
VEGFB-202ENST00000426086 ANKRD36CQ5JPF3 1778 aa17.92■□□□□ 0.46
VEGFB-202ENST00000426086 CA12O43570 354 aa17.92■□□□□ 0.46
VEGFB-202ENST00000426086 EGFRP00533 1210 aa17.92■□□□□ 0.46
VEGFB-202ENST00000426086 CDC37L1Q7L3B6 337 aa17.92■□□□□ 0.46
VEGFB-202ENST00000426086 USP48Q86UV5 1035 aa17.92■□□□□ 0.46
VEGFB-202ENST00000426086 ZC3H15Q8WU90 426 aaKnown RBP17.92■□□□□ 0.46
VEGFB-202ENST00000426086 COL4A1P02462 1669 aa17.92■□□□□ 0.46
VEGFB-202ENST00000426086 BBOX1O75936 387 aa17.91■□□□□ 0.46
VEGFB-202ENST00000426086 SAMD7Q7Z3H4 446 aa17.91■□□□□ 0.46
VEGFB-202ENST00000426086 NLRP10Q86W26 655 aa17.91■□□□□ 0.46
VEGFB-202ENST00000426086 MICALL2Q8IY33 904 aa17.91■□□□□ 0.46
VEGFB-202ENST00000426086 CDHR2Q9BYE9 1310 aa17.91■□□□□ 0.46
VEGFB-202ENST00000426086 FAM155AB1AL88 458 aaPredicted RBP17.9■□□□□ 0.46
VEGFB-202ENST00000426086 NECTIN2Q92692 538 aa17.9■□□□□ 0.46
VEGFB-202ENST00000426086 TMX4Q9H1E5 349 aaPredicted RBP17.9■□□□□ 0.46
VEGFB-202ENST00000426086 HUNKP57058 714 aa17.89■□□□□ 0.45
VEGFB-202ENST00000426086 GRAPQ13588 217 aa17.89■□□□□ 0.45
VEGFB-202ENST00000426086 TNIP1Q15025 636 aa17.89■□□□□ 0.45
VEGFB-202ENST00000426086 COPS6Q7L5N1 327 aa17.89■□□□□ 0.45
VEGFB-202ENST00000426086 GRAPLQ8TC17 118 aaPredicted RBP17.89■□□□□ 0.45
VEGFB-202ENST00000426086 LRRC37AA6NMS7 1700 aa17.89■□□□□ 0.45
VEGFB-202ENST00000426086 PSMD14O00487 310 aa17.88■□□□□ 0.45
VEGFB-202ENST00000426086 AIMP1Q12904 312 aaKnown RBP17.88■□□□□ 0.45
VEGFB-202ENST00000426086 NOGQ13253 232 aa17.88■□□□□ 0.45
VEGFB-202ENST00000426086 KCNQ5Q9NR82 932 aa17.88■□□□□ 0.45
VEGFB-202ENST00000426086 TSPYL4Q9UJ04 414 aa17.88■□□□□ 0.45
VEGFB-202ENST00000426086 ADM5C9JUS6 153 aa17.87■□□□□ 0.45
VEGFB-202ENST00000426086 TBC1D10BQ4KMP7 808 aaPredicted RBP17.87■□□□□ 0.45
VEGFB-202ENST00000426086 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
VEGFB-202ENST00000426086 XAGE3Q8WTP9 111 aa17.87■□□□□ 0.45
VEGFB-202ENST00000426086 DBNDD1Q9H9R9 158 aa17.87■□□□□ 0.45
VEGFB-202ENST00000426086 POLR2AP24928 1970 aaKnown RBP17.87■□□□□ 0.45
VEGFB-202ENST00000426086 DDX60Q8IY21 1712 aaKnown RBP17.86■□□□□ 0.45
VEGFB-202ENST00000426086 H7C1D1 291 aa17.86■□□□□ 0.45
VEGFB-202ENST00000426086 NEFMP07197 916 aa17.86■□□□□ 0.45
VEGFB-202ENST00000426086 TCIRG1Q13488 830 aa17.86■□□□□ 0.45
VEGFB-202ENST00000426086 KRT24Q2M2I5 525 aa17.86■□□□□ 0.45
VEGFB-202ENST00000426086 TRMT112Q9UI30 125 aaKnown RBP17.86■□□□□ 0.45
VEGFB-202ENST00000426086 RIMBP2O15034 1052 aa17.85■□□□□ 0.45
VEGFB-202ENST00000426086 KIF23Q02241 960 aaPredicted RBP17.85■□□□□ 0.45
VEGFB-202ENST00000426086 RGMBQ6NW40 437 aa17.85■□□□□ 0.45
VEGFB-202ENST00000426086 KRT26Q7Z3Y9 468 aa17.85■□□□□ 0.45
VEGFB-202ENST00000426086 RTL9Q8NET4 1388 aa17.85■□□□□ 0.45
VEGFB-202ENST00000426086 SH3TC1Q8TE82 1336 aa17.85■□□□□ 0.45
VEGFB-202ENST00000426086 CELF1Q92879 486 aaKnown RBP17.85■□□□□ 0.45
VEGFB-202ENST00000426086 GBA2Q9HCG7 927 aaPredicted RBP17.85■□□□□ 0.45
VEGFB-202ENST00000426086 ASTN2O75129 1339 aaPredicted RBP17.84■□□□□ 0.45
VEGFB-202ENST00000426086 SOX10P56693 466 aa17.84■□□□□ 0.45
VEGFB-202ENST00000426086 RBM26Q5T8P6 1007 aaKnown RBP17.84■□□□□ 0.45
VEGFB-202ENST00000426086 DPF2Q92785 391 aa17.84■□□□□ 0.45
VEGFB-202ENST00000426086 POLLQ9UGP5 575 aa17.84■□□□□ 0.45
VEGFB-202ENST00000426086 WASHC4Q2M389 1173 aa17.83■□□□□ 0.44
VEGFB-202ENST00000426086 RNF186Q9NXI6 227 aa17.83■□□□□ 0.44
VEGFB-202ENST00000426086 NSFL1CQ9UNZ2 370 aaKnown RBP17.83■□□□□ 0.44
VEGFB-202ENST00000426086 GPSM2P81274 684 aa17.82■□□□□ 0.44
VEGFB-202ENST00000426086 DOK7Q18PE1 504 aa17.82■□□□□ 0.44
VEGFB-202ENST00000426086 HSP90AB3PQ58FF7 597 aa17.82■□□□□ 0.44
VEGFB-202ENST00000426086 SCN9AQ15858 1988 aa17.82■□□□□ 0.44
VEGFB-202ENST00000426086 MAPK8IP3Q9UPT6 1336 aa17.81■□□□□ 0.44
VEGFB-202ENST00000426086 ECE2O60344 883 aa17.81■□□□□ 0.44
VEGFB-202ENST00000426086 TRPA1O75762 1119 aa17.81■□□□□ 0.44
VEGFB-202ENST00000426086 RIPK4P57078 832 aa17.81■□□□□ 0.44
VEGFB-202ENST00000426086 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
VEGFB-202ENST00000426086 ZNF157P51786 506 aaPredicted RBP17.8■□□□□ 0.44
VEGFB-202ENST00000426086 C2orf69Q8N8R5 385 aa17.8■□□□□ 0.44
VEGFB-202ENST00000426086 CSRNP1Q96S65 589 aa17.8■□□□□ 0.44
VEGFB-202ENST00000426086 SAGE1Q9NXZ1 904 aa17.8■□□□□ 0.44
VEGFB-202ENST00000426086 PCDH10Q9P2E7 1040 aa17.8■□□□□ 0.44
VEGFB-202ENST00000426086 ATP5J2-PTCD1G3V325 749 aa17.79■□□□□ 0.44
VEGFB-202ENST00000426086 C6orf229H3BNL8 230 aa17.79■□□□□ 0.44
VEGFB-202ENST00000426086 SF3B3Q15393 1217 aaKnown RBP17.79■□□□□ 0.44
VEGFB-202ENST00000426086 RTL5Q5HYW3 569 aaPredicted RBP17.79■□□□□ 0.44
VEGFB-202ENST00000426086 TMC4Q7Z404 712 aa17.79■□□□□ 0.44
VEGFB-202ENST00000426086 DCPSQ96C86 337 aaKnown RBP17.79■□□□□ 0.44
VEGFB-202ENST00000426086 GGA3Q9NZ52 723 aa17.79■□□□□ 0.44
VEGFB-202ENST00000426086 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
VEGFB-202ENST00000426086 SLC10A3P09131 477 aa17.78■□□□□ 0.44
VEGFB-202ENST00000426086 KIF4BQ2VIQ3 1234 aa17.78■□□□□ 0.44
VEGFB-202ENST00000426086 CCDC102AQ96A19 550 aa17.78■□□□□ 0.44
VEGFB-202ENST00000426086 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms