RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 CATIPQ7Z7H3 387 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 LMBR1Q8WVP7 490 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 BICDL2A1A5D9 508 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 CCDC181Q5TID7 509 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 TMEM87BQ96K49 555 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 SLC26A8Q96RN1 970 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 SEC63Q9UGP8 760 aaKnown RBP8.22□□□□□ -1.09
ALMS1-201ENST00000423048 AGLP35573 1532 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 GCOM1H8Y6P7 765 aaPredicted RBP8.22□□□□□ -1.09
ALMS1-201ENST00000423048 MYZAPP0CAP1 466 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 ERMNQ8TAM6 284 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 BBXQ8WY36 941 aaPredicted RBP8.22□□□□□ -1.09
ALMS1-201ENST00000423048 DCAF5Q96JK2 942 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 ANKRD2Q9GZV1 360 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
ALMS1-201ENST00000423048 ERVK-7P63135 1459 aa8.22□□□□□ -1.09
ALMS1-201ENST00000423048 FYB1O15117 783 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 TRIM37O94972 964 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 CCDC51Q96ER9 411 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 MAGEF1Q9HAY2 307 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 TMOD3Q9NYL9 352 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 AMOTL2Q9Y2J4 779 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 ABCA9Q8IUA7 1624 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 ZNF213O14771 459 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 EZRP15311 586 aaKnown RBP8.21□□□□□ -1.09
ALMS1-201ENST00000423048 PAFAH1B1P43034 410 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 PIP4K2BP78356 416 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 PPP2R5EQ16537 467 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 RRP12Q5JTH9 1297 aaKnown RBP8.21□□□□□ -1.09
ALMS1-201ENST00000423048 GIGYF2Q6Y7W6 1299 aaKnown RBP8.21□□□□□ -1.09
ALMS1-201ENST00000423048 IP6K1Q92551 441 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 NEK1Q96PY6 1258 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 FRMPD1Q5SYB0 1578 aa8.21□□□□□ -1.09
ALMS1-201ENST00000423048 ABCC12Q96J65 1359 aa8.21□□□□□ -1.1
ALMS1-201ENST00000423048 ABCD1P33897 745 aa8.21□□□□□ -1.1
ALMS1-201ENST00000423048 APOBRQ0VD83 1088 aa8.21□□□□□ -1.1
ALMS1-201ENST00000423048 CCDC102BQ68D86 513 aa8.21□□□□□ -1.1
ALMS1-201ENST00000423048 NAA16Q6N069 864 aaPredicted RBP8.21□□□□□ -1.1
ALMS1-201ENST00000423048 TBC1D9Q6ZT07 1266 aa8.21□□□□□ -1.1
ALMS1-201ENST00000423048 CCDC9Q9Y3X0 531 aaKnown RBP8.21□□□□□ -1.1
ALMS1-201ENST00000423048 CAMSAP1Q5T5Y3 1602 aa8.21□□□□□ -1.1
ALMS1-201ENST00000423048 USP32Q8NFA0 1604 aa8.21□□□□□ -1.1
ALMS1-201ENST00000423048 KIF4AO95239 1232 aa8.21□□□□□ -1.1
ALMS1-201ENST00000423048 MBIPQ9NS73 344 aa8.21□□□□□ -1.1
ALMS1-201ENST00000423048 KRT83P78385 493 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 RHPN1Q8TCX5 695 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 ZCCHC11Q5TAX3 1644 aaKnown RBP8.2□□□□□ -1.1
ALMS1-201ENST00000423048 MAST3O60307 1309 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 SHTN1A0MZ66 631 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 CYLC1P35663 651 aaPredicted RBP8.2□□□□□ -1.1
ALMS1-201ENST00000423048 PDE1AP54750 535 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 VWA3BQ502W6 1294 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 PPP1R2P3Q6NXS1 205 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 OSBPL3Q9H4L5 887 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 PRDM11Q9NQV5 511 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 TSKSQ9UJT2 592 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 CDC42BPBQ9Y5S2 1711 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 TOP1P11387 765 aaKnown RBP8.2□□□□□ -1.1
ALMS1-201ENST00000423048 MCMDC2Q4G0Z9 681 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 ARHGAP29Q52LW3 1261 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 GALNT17Q6IS24 598 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 ARFGAP2Q8N6H7 521 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 TSR2Q969E8 191 aaKnown RBP8.2□□□□□ -1.1
ALMS1-201ENST00000423048 CALML4Q96GE6 196 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 SPHKAPQ2M3C7 1700 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 ABCC4O15439 1325 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 PCDH11XQ9BZA7 1347 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 PCDH11YQ9BZA8 1340 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 TDO2P48775 406 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 CCDC91Q7Z6B0 441 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 TNPO1Q92973 898 aaKnown RBP8.2□□□□□ -1.1
ALMS1-201ENST00000423048 NAPBQ9H115 298 aa8.2□□□□□ -1.1
ALMS1-201ENST00000423048 A0A1W2PP64 1363 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 ATP8B1O43520 1251 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 CCDC152Q4G0S7 254 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 CUL5Q93034 780 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 USP19O94966 1318 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 ACEP12821 1306 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 FIBPO43427 364 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 WAPLQ7Z5K2 1190 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 NUP58Q9BVL2 599 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 ATG3Q9NT62 314 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 TCP11L1Q9NUJ3 509 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 SLC12A7Q9Y666 1083 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 CHL1O00533 1208 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 SH3BGRP55822 239 aaPredicted RBP8.19□□□□□ -1.1
ALMS1-201ENST00000423048 TOM1L2Q6ZVM7 507 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 CRNKL1Q9BZJ0 848 aaKnown RBP8.19□□□□□ -1.1
ALMS1-201ENST00000423048 DKC1O60832 514 aaKnown RBP eCLIP8.19□□□□□ -1.1
ALMS1-201ENST00000423048 VAMP4O75379 141 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 FERMT1Q9BQL6 677 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 HDAC9Q9UKV0 1011 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 ZKSCAN5Q9Y2L8 839 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 TMEM2Q9UHN6 1383 aa8.19□□□□□ -1.1
ALMS1-201ENST00000423048 CASQ1P31415 396 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 ZNF713Q8N859 430 aaPredicted RBP8.18□□□□□ -1.1
ALMS1-201ENST00000423048 TRIML1Q8N9V2 468 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 ESR2Q92731 530 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 LRRC45Q96CN5 670 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms