RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 SF3B2Q13435 895 aaKnown RBP7.42□□□□□ -1.22
PTP4A1P1-201ENST00000420539 AAMPQ13685 434 aa7.42□□□□□ -1.22
PTP4A1P1-201ENST00000420539 GNL2Q13823 731 aaKnown RBP7.42□□□□□ -1.22
PTP4A1P1-201ENST00000420539 BMS1Q14692 1282 aaKnown RBP7.42□□□□□ -1.22
PTP4A1P1-201ENST00000420539 MRPL42Q9Y6G3 142 aaKnown RBP7.42□□□□□ -1.22
PTP4A1P1-201ENST00000420539 TNFRSF10BO14763 440 aa7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 RTN1Q16799 776 aa7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 POTEAQ6S8J7 498 aa7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 FILIP1Q7Z7B0 1213 aa7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 CCDC146Q8IYE0 955 aa7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 RPUSD2Q8IZ73 545 aaKnown RBP7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 TMTC2Q8N394 836 aa7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 NME8Q8N427 588 aa7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 KLRG1Q96E93 195 aa7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 GAS2L1Q99501 681 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 METTL5Q9NRN9 209 aaKnown RBP7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 IFT57Q9NWB7 429 aa7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 G3BP2Q9UN86 482 aaKnown RBP7.41□□□□□ -1.22
PTP4A1P1-201ENST00000420539 MSX1P28360 303 aa7.4□□□□□ -1.22
PTP4A1P1-201ENST00000420539 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.4□□□□□ -1.22
PTP4A1P1-201ENST00000420539 FAM26DQ5JW98 314 aa7.4□□□□□ -1.22
PTP4A1P1-201ENST00000420539 MYO19Q96H55 970 aa7.4□□□□□ -1.22
PTP4A1P1-201ENST00000420539 HSH2DQ96JZ2 352 aa7.4□□□□□ -1.22
PTP4A1P1-201ENST00000420539 FAM161BQ96MY7 647 aa7.4□□□□□ -1.22
PTP4A1P1-201ENST00000420539 STIM2Q9P246 746 aa7.4□□□□□ -1.22
PTP4A1P1-201ENST00000420539 A0A1B0GTH6 734 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 FAM13AO94988 1023 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ATP4AP20648 1035 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 PTMSP20962 102 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ARHGAP4P98171 946 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 C11orf91Q3C1V1 193 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 C1orf53Q5VUE5 145 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ATCAYQ86WG3 371 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 CCAR1Q8IX12 1150 aaKnown RBP7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 IFT43Q96FT9 208 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 RUBCNLQ9H714 662 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 NEUROD4Q9HD90 331 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ZDHHC3Q9NYG2 299 aa7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ZBTB39O15060 712 aa7.38□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ARID5AQ03989 594 aa7.38□□□□□ -1.23
PTP4A1P1-201ENST00000420539 RIPOR1Q6ZS17 1223 aa7.38□□□□□ -1.23
PTP4A1P1-201ENST00000420539 GPATCH11Q8N954 259 aa7.38□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ZNF280CQ8ND82 737 aa7.38□□□□□ -1.23
PTP4A1P1-201ENST00000420539 STAG1Q8WVM7 1258 aa7.38□□□□□ -1.23
PTP4A1P1-201ENST00000420539 DDX56Q9NY93 547 aaKnown RBP7.38□□□□□ -1.23
PTP4A1P1-201ENST00000420539 GMPR2Q9P2T1 348 aaKnown RBP7.38□□□□□ -1.23
PTP4A1P1-201ENST00000420539 GJA3Q9Y6H8 435 aa7.38□□□□□ -1.23
PTP4A1P1-201ENST00000420539 SH3BP5O60239 455 aa7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 S100BP04271 92 aaPredicted RBP7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 PAX3P23760 479 aa7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ZNF76P36508 570 aa7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 EIF1AXP47813 144 aaKnown RBP7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 XPCQ01831 940 aaPredicted RBP7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 LONRF3Q496Y0 759 aa7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 WDR44Q5JSH3 913 aa7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 LRRC69Q6ZNQ3 347 aa7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ETFBKMTQ8IXQ9 262 aa7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 MRS2Q9HD23 443 aa7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 PRR12Q9ULL5 1215 aa7.37□□□□□ -1.23
PTP4A1P1-201ENST00000420539 A0A1W2PNR3 127 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 TBX4P57082 545 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 RHBDL3P58872 404 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 PTSQ03393 145 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 TSHZ1Q6ZSZ6 1077 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 TREML1Q86YW5 311 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 PGBD3Q8N328 593 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ABTB2Q8N961 1025 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 SUSD3Q96L08 255 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ZIC5Q96T25 663 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 SENP2Q9HC62 589 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 PARP2Q9UGN5 583 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 BCS1LQ9Y276 419 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 DYRK1BQ9Y463 629 aa7.36□□□□□ -1.23
PTP4A1P1-201ENST00000420539 SENP3-EIF4A1A0A087X0R7 540 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 DNAJC6O75061 913 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 F11P03951 625 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 XRCC5P13010 732 aaKnown RBP7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 SNRPBP14678 240 aaKnown RBP7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ZAP70P43403 619 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ZFYVE27Q5T4F4 411 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 FMNL3Q8IVF7 1028 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 TMC1Q8TDI8 760 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 MAF1Q9H063 256 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 SPC25Q9HBM1 224 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 CCDC87Q9NVE4 849 aa7.35□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ENPP3O14638 875 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 SORBS3O60504 671 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 STK10O94804 968 aaKnown RBP7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 NPR3P17342 541 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 DNM1Q05193 864 aaKnown RBP7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 NFE2L2Q16236 605 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 C4orf46Q504U0 113 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 ALKBH2Q6NS38 261 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 TMC7Q7Z402 723 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 TMC4Q7Z404 712 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 GPR152Q8TDT2 470 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 C7orf43Q8WVR3 580 aa7.34□□□□□ -1.23
PTP4A1P1-201ENST00000420539 KIFC2Q96AC6 838 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms