RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 PROM2Q8N271 834 aa12.55□□□□□ -0.4
DEPDC4-203ENST00000416321 NOP58Q9Y2X3 529 aaKnown RBP12.55□□□□□ -0.4
DEPDC4-203ENST00000416321 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
DEPDC4-203ENST00000416321 SMARCA5O60264 1052 aaPredicted RBP12.54□□□□□ -0.4
DEPDC4-203ENST00000416321 CTSWP56202 376 aa12.54□□□□□ -0.4
DEPDC4-203ENST00000416321 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
DEPDC4-203ENST00000416321 NBPF5PQ86XG9 351 aaPredicted RBP12.54□□□□□ -0.4
DEPDC4-203ENST00000416321 SIL1Q9H173 461 aa12.54□□□□□ -0.4
DEPDC4-203ENST00000416321 COPRSQ9NQ92 184 aa12.54□□□□□ -0.4
DEPDC4-203ENST00000416321 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
DEPDC4-203ENST00000416321 MYH3P11055 1940 aa12.53□□□□□ -0.4
DEPDC4-203ENST00000416321 NTSR2O95665 410 aa12.53□□□□□ -0.4
DEPDC4-203ENST00000416321 PDE4AP27815 886 aa12.53□□□□□ -0.4
DEPDC4-203ENST00000416321 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
DEPDC4-203ENST00000416321 IFIT5Q13325 482 aaKnown RBP12.53□□□□□ -0.4
DEPDC4-203ENST00000416321 RHPN1Q8TCX5 695 aa12.53□□□□□ -0.4
DEPDC4-203ENST00000416321 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
DEPDC4-203ENST00000416321 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
DEPDC4-203ENST00000416321 ANKRD18BA2A2Z9 1011 aa12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 EZH2Q15910 746 aaKnown RBP12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 CCDC152Q4G0S7 254 aa12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 TPTE2Q6XPS3 522 aa12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 AMIGO3Q86WK7 504 aa12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 CLASRPQ8N2M8 674 aaKnown RBP12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 CCDC85AQ96PX6 553 aaPredicted RBP12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 IL1RAPL2Q9NP60 686 aa12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 CARMIL3Q8ND23 1372 aa12.52□□□□□ -0.41
DEPDC4-203ENST00000416321 LAMB2P55268 1798 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 CSF1RP07333 972 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 RFX5P48382 616 aaPredicted RBP12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 NUTM1Q86Y26 1132 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 TTLL11Q8NHH1 800 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 KLHDC4Q8TBB5 520 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 CAMKK2Q96RR4 588 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
DEPDC4-203ENST00000416321 IFIT2P09913 472 aaKnown RBP12.5□□□□□ -0.41
DEPDC4-203ENST00000416321 IL15P40933 162 aaPredicted RBP12.5□□□□□ -0.41
DEPDC4-203ENST00000416321 NFIXQ14938 502 aa12.5□□□□□ -0.41
DEPDC4-203ENST00000416321 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
DEPDC4-203ENST00000416321 REM2Q8IYK8 340 aaPredicted RBP12.5□□□□□ -0.41
DEPDC4-203ENST00000416321 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
DEPDC4-203ENST00000416321 EP400Q96L91 3159 aa12.5□□□□□ -0.41
DEPDC4-203ENST00000416321 EYA2O00167 538 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 CIAO1O76071 339 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 GYS1P13807 737 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 MX1P20591 662 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 ITGA6P23229 1130 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 ST5P78524 1137 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 PLEKHM2Q8IWE5 1019 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 C16orf71Q8IYS4 520 aaPredicted RBP12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 CNBD1Q8NA66 436 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 NLRP3Q96P20 1036 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 GREM2Q9H772 168 aa12.49□□□□□ -0.41
DEPDC4-203ENST00000416321 DDX60Q8IY21 1712 aaKnown RBP12.48□□□□□ -0.41
DEPDC4-203ENST00000416321 SLC15A2Q16348 729 aa12.48□□□□□ -0.41
DEPDC4-203ENST00000416321 AACSQ86V21 672 aa12.48□□□□□ -0.41
DEPDC4-203ENST00000416321 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
DEPDC4-203ENST00000416321 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
DEPDC4-203ENST00000416321 CNNM1Q9NRU3 951 aa12.48□□□□□ -0.41
DEPDC4-203ENST00000416321 AOX1Q06278 1338 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 TUBGCP6Q96RT7 1819 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 SASH1O94885 1247 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 IGHMBP2P38935 993 aaKnown RBP12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 BMP2KLQ5H9B9 411 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 SLC10A5Q5PT55 438 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 LDHAL6AQ6ZMR3 332 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 DEFB132Q7Z7B7 95 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 OTUD7AQ8TE49 926 aaPredicted RBP12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 MPHOSPH8Q99549 860 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 CEP126Q9P2H0 1117 aa12.47□□□□□ -0.41
DEPDC4-203ENST00000416321 RTL9Q8NET4 1388 aa12.46□□□□□ -0.41
DEPDC4-203ENST00000416321 PNPLA7Q6ZV29 1317 aa12.46□□□□□ -0.41
DEPDC4-203ENST00000416321 ERC2O15083 957 aa12.46□□□□□ -0.41
DEPDC4-203ENST00000416321 SERPINB2P05120 415 aa12.46□□□□□ -0.41
DEPDC4-203ENST00000416321 PDE1AP54750 535 aa12.46□□□□□ -0.41
DEPDC4-203ENST00000416321 TFCP2Q12800 502 aa12.46□□□□□ -0.41
DEPDC4-203ENST00000416321 AKAP2Q9Y2D5 859 aa12.46□□□□□ -0.41
DEPDC4-203ENST00000416321 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
DEPDC4-203ENST00000416321 ABCC12Q96J65 1359 aa12.45□□□□□ -0.42
DEPDC4-203ENST00000416321 TTC41PQ6P2S7 1318 aa12.45□□□□□ -0.42
DEPDC4-203ENST00000416321 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
DEPDC4-203ENST00000416321 LRRC24Q50LG9 513 aa12.45□□□□□ -0.42
DEPDC4-203ENST00000416321 TNNI3KQ59H18 835 aa12.45□□□□□ -0.42
DEPDC4-203ENST00000416321 METTL24Q5JXM2 366 aa12.45□□□□□ -0.42
DEPDC4-203ENST00000416321 OSBPL3Q9H4L5 887 aa12.45□□□□□ -0.42
DEPDC4-203ENST00000416321 PARP3Q9Y6F1 533 aa12.45□□□□□ -0.42
DEPDC4-203ENST00000416321 FPGT-TNNI3KV9GXZ4 949 aa12.45□□□□□ -0.42
DEPDC4-203ENST00000416321 EIF5BO60841 1220 aaKnown RBP12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 TM4SF1P30408 202 aa12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 CASC1Q6TDU7 716 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms