RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 CASTP20810 708 aaKnown RBP29.54■■■□□ 2.32
VRK2-202ENST00000412104 JCADQ9P266 1359 aa29.54■■■□□ 2.32
VRK2-202ENST00000412104 NUTM2BA6NNL0 878 aaPredicted RBP29.53■■■□□ 2.32
VRK2-202ENST00000412104 NUTM2EB1AL46 878 aaPredicted RBP29.53■■■□□ 2.32
VRK2-202ENST00000412104 CCDC57Q2TAC2 916 aa29.53■■■□□ 2.32
VRK2-202ENST00000412104 NUTM2AQ8IVF1 878 aaPredicted RBP29.53■■■□□ 2.32
VRK2-202ENST00000412104 NEUROD6Q96NK8 337 aa29.53■■■□□ 2.32
VRK2-202ENST00000412104 AK2P54819 239 aa29.53■■■□□ 2.32
VRK2-202ENST00000412104 HSP90AB3PQ58FF7 597 aa29.53■■■□□ 2.32
VRK2-202ENST00000412104 PUS3Q9BZE2 481 aaKnown RBP29.53■■■□□ 2.32
VRK2-202ENST00000412104 NUP98P52948 1817 aa29.53■■■□□ 2.32
VRK2-202ENST00000412104 SKOR2Q2VWA4 1001 aaPredicted RBP29.52■■■□□ 2.32
VRK2-202ENST00000412104 ADCK5Q3MIX3 580 aa29.52■■■□□ 2.32
VRK2-202ENST00000412104 CREB3L3Q68CJ9 461 aa29.52■■■□□ 2.32
VRK2-202ENST00000412104 ZNF589Q86UQ0 364 aaPredicted RBP29.52■■■□□ 2.32
VRK2-202ENST00000412104 JAKMIP1Q96N16 626 aaKnown RBP29.52■■■□□ 2.32
VRK2-202ENST00000412104 TM6SF1Q9BZW5 370 aa29.52■■■□□ 2.32
VRK2-202ENST00000412104 SPATA31A5Q5VU36 1347 aa29.52■■■□□ 2.32
VRK2-202ENST00000412104 SPATA31A7Q8IWB4 1347 aa29.52■■■□□ 2.32
VRK2-202ENST00000412104 CDHR2Q9BYE9 1310 aa29.52■■■□□ 2.32
VRK2-202ENST00000412104 GPTP24298 496 aa29.51■■■□□ 2.32
VRK2-202ENST00000412104 KCNJ4P48050 445 aa29.51■■■□□ 2.32
VRK2-202ENST00000412104 NLRP10Q86W26 655 aa29.51■■■□□ 2.32
VRK2-202ENST00000412104 CCDC9Q9Y3X0 531 aaKnown RBP29.51■■■□□ 2.32
VRK2-202ENST00000412104 ZKSCAN1P17029 563 aaPredicted RBP29.51■■■□□ 2.31
VRK2-202ENST00000412104 TIMM10P62072 90 aa29.51■■■□□ 2.31
VRK2-202ENST00000412104 SLIT2O94813 1529 aa29.5■■■□□ 2.31
VRK2-202ENST00000412104 CPA1P15085 419 aa29.5■■■□□ 2.31
VRK2-202ENST00000412104 CSF1RP07333 972 aa29.49■■■□□ 2.31
VRK2-202ENST00000412104 IL6STP40189 918 aaPredicted RBP29.49■■■□□ 2.31
VRK2-202ENST00000412104 RUFY3Q7L099 469 aa29.49■■■□□ 2.31
VRK2-202ENST00000412104 ZSWIM6Q9HCJ5 1215 aa29.49■■■□□ 2.31
VRK2-202ENST00000412104 FBXO3Q9UK99 471 aa29.49■■■□□ 2.31
VRK2-202ENST00000412104 PIP4K2BP78356 416 aa29.49■■■□□ 2.31
VRK2-202ENST00000412104 MARCH10Q8NA82 808 aaPredicted RBP29.49■■■□□ 2.31
VRK2-202ENST00000412104 A0A1B0GUL7 405 aa29.48■■■□□ 2.31
VRK2-202ENST00000412104 SLC27A2O14975 620 aa29.48■■■□□ 2.31
VRK2-202ENST00000412104 DDX46Q7L014 1031 aaKnown RBP29.48■■■□□ 2.31
VRK2-202ENST00000412104 LIMCH1Q9UPQ0 1083 aa29.48■■■□□ 2.31
VRK2-202ENST00000412104 MYH3P11055 1940 aa29.48■■■□□ 2.31
VRK2-202ENST00000412104 VPS53Q5VIR6 699 aa29.47■■■□□ 2.31
VRK2-202ENST00000412104 MCTP1Q6DN14 999 aa29.47■■■□□ 2.31
VRK2-202ENST00000412104 CCDC85AQ96PX6 553 aaPredicted RBP29.47■■■□□ 2.31
VRK2-202ENST00000412104 RPAP1Q9BWH6 1393 aaPredicted RBP29.47■■■□□ 2.31
VRK2-202ENST00000412104 PALLDQ8WX93 1383 aa29.47■■■□□ 2.31
VRK2-202ENST00000412104 SYNE4Q8N205 404 aa29.47■■■□□ 2.31
VRK2-202ENST00000412104 KBTBD3Q8NAB2 608 aa29.47■■■□□ 2.31
VRK2-202ENST00000412104 ACSBG1Q96GR2 724 aa29.47■■■□□ 2.31
VRK2-202ENST00000412104 CEP126Q9P2H0 1117 aa29.47■■■□□ 2.31
VRK2-202ENST00000412104 CYP46A1Q9Y6A2 500 aa29.47■■■□□ 2.31
VRK2-202ENST00000412104 A0A0G2JS52 829 aa29.46■■■□□ 2.31
VRK2-202ENST00000412104 ERVV-1B6SEH8 477 aa29.46■■■□□ 2.31
VRK2-202ENST00000412104 TOM1O60784 492 aa29.46■■■□□ 2.31
VRK2-202ENST00000412104 TAF5LO75529 589 aa29.46■■■□□ 2.31
VRK2-202ENST00000412104 DZIP3Q86Y13 1208 aaKnown RBP29.46■■■□□ 2.31
VRK2-202ENST00000412104 PDRG1Q9NUG6 133 aa29.46■■■□□ 2.31
VRK2-202ENST00000412104 BRD1O95696 1058 aa29.45■■■□□ 2.31
VRK2-202ENST00000412104 IFIT5Q13325 482 aaKnown RBP29.45■■■□□ 2.31
VRK2-202ENST00000412104 RNF20Q5VTR2 975 aa29.45■■■□□ 2.31
VRK2-202ENST00000412104 BARGINQ6ZT62 677 aa29.45■■■□□ 2.31
VRK2-202ENST00000412104 SPEF2Q9C093 1822 aa29.45■■■□□ 2.31
VRK2-202ENST00000412104 TAF7LQ5H9L4 462 aa29.45■■■□□ 2.3
VRK2-202ENST00000412104 PAG1Q9NWQ8 432 aa29.45■■■□□ 2.3
VRK2-202ENST00000412104 CHGBP05060 677 aa29.44■■■□□ 2.3
VRK2-202ENST00000412104 TBC1D2BQ9UPU7 963 aa29.44■■■□□ 2.3
VRK2-202ENST00000412104 CICQ96RK0 1608 aaPredicted RBP29.44■■■□□ 2.3
VRK2-202ENST00000412104 GOLIM4O00461 696 aa29.43■■■□□ 2.3
VRK2-202ENST00000412104 LARP6Q9BRS8 491 aaKnown RBP29.43■■■□□ 2.3
VRK2-202ENST00000412104 RREB1Q92766 1687 aa29.43■■■□□ 2.3
VRK2-202ENST00000412104 FSD2A1L4K1 749 aa29.43■■■□□ 2.3
VRK2-202ENST00000412104 L1TD1Q5T7N2 865 aaKnown RBP29.43■■■□□ 2.3
VRK2-202ENST00000412104 HMG20BQ9P0W2 317 aa29.42■■■□□ 2.3
VRK2-202ENST00000412104 SH3TC1Q8TE82 1336 aa29.42■■■□□ 2.3
VRK2-202ENST00000412104 GOLGA6L3A6NEY3 463 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 PSMA5P28066 241 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 CTSWP56202 376 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 MCMDC2Q4G0Z9 681 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 USPL1Q5W0Q7 1092 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 TTLL11Q8NHH1 800 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 SEC62Q99442 399 aaKnown RBP29.41■■■□□ 2.3
VRK2-202ENST00000412104 TRMT112Q9UI30 125 aaKnown RBP29.41■■■□□ 2.3
VRK2-202ENST00000412104 AKAP2Q9Y2D5 859 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 RIC1Q4ADV7 1423 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 IFIT1P09914 478 aaKnown RBP29.41■■■□□ 2.3
VRK2-202ENST00000412104 EIF5P55010 431 aaKnown RBP29.41■■■□□ 2.3
VRK2-202ENST00000412104 FOXD4L5Q5VV16 416 aaPredicted RBP29.41■■■□□ 2.3
VRK2-202ENST00000412104 INTS5Q6P9B9 1019 aaKnown RBP29.41■■■□□ 2.3
VRK2-202ENST00000412104 CCDC129Q6ZRS4 1044 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.41■■■□□ 2.3
VRK2-202ENST00000412104 FOXD4L4Q8WXT5 416 aaPredicted RBP29.41■■■□□ 2.3
VRK2-202ENST00000412104 CCDC87Q9NVE4 849 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 UBN2Q6ZU65 1347 aa29.41■■■□□ 2.3
VRK2-202ENST00000412104 IRS4O14654 1257 aaPredicted RBP29.4■■■□□ 2.3
VRK2-202ENST00000412104 LARGE1O95461 756 aa29.4■■■□□ 2.3
VRK2-202ENST00000412104 ATP6V1AP38606 617 aa29.4■■■□□ 2.3
VRK2-202ENST00000412104 KLHL40Q2TBA0 621 aa29.4■■■□□ 2.3
VRK2-202ENST00000412104 GREM2Q9H772 168 aa29.4■■■□□ 2.3
VRK2-202ENST00000412104 LMBRD1Q9NUN5 540 aa29.4■■■□□ 2.3
VRK2-202ENST00000412104 ITGA6P23229 1130 aa29.39■■■□□ 2.3
VRK2-202ENST00000412104 TICAM2Q86XR7 235 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms