RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 CMTR1Q8N1G2 835 aaKnown RBP6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 ABTB2Q8N961 1025 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 IGFLR1Q9H665 355 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 FAM13BQ9NYF5 915 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 SEPT3Q9UH03 358 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 TIMELESSQ9UNS1 1208 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 KRBA1A5PL33 1030 aa6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 SASH3O75995 380 aa6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 ITGB2P05107 769 aa6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 TARSP26639 723 aaKnown RBP6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 COL9A3Q14050 684 aaPredicted RBP6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 GPAT2Q6NUI2 795 aa6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 DHX32Q7L7V1 743 aaKnown RBP6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 TRPM4Q8TD43 1214 aa6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 HELQQ8TDG4 1101 aa6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 PLVAPQ9BX97 442 aa6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 NAGPAQ9UK23 515 aa6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 USTQ9Y2C2 406 aa6.84□□□□□ -1.31
RNU4-55P-201ENST00000410731 SPDYE3A6NKU9 549 aa6.83□□□□□ -1.32
RNU4-55P-201ENST00000410731 NID1P14543 1247 aa6.83□□□□□ -1.32
RNU4-55P-201ENST00000410731 ARID4AP29374 1257 aaPredicted RBP6.83□□□□□ -1.32
RNU4-55P-201ENST00000410731 ZAP70P43403 619 aa6.83□□□□□ -1.32
RNU4-55P-201ENST00000410731 GPLD1P80108 840 aa6.83□□□□□ -1.32
RNU4-55P-201ENST00000410731 TRIP4Q15650 581 aaPredicted RBP6.83□□□□□ -1.32
RNU4-55P-201ENST00000410731 SUPT5HO00267 1087 aaKnown RBP6.82□□□□□ -1.32
RNU4-55P-201ENST00000410731 LILRB5O75023 590 aa6.82□□□□□ -1.32
RNU4-55P-201ENST00000410731 C8orf86Q6ZUL3 223 aa6.82□□□□□ -1.32
RNU4-55P-201ENST00000410731 PIK3R5Q8WYR1 880 aa6.82□□□□□ -1.32
RNU4-55P-201ENST00000410731 TLR7Q9NYK1 1049 aaKnown RBP6.82□□□□□ -1.32
RNU4-55P-201ENST00000410731 ZBTB42B2RXF5 422 aa6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 ZBTB39O15060 712 aa6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 SPATA31C1P0DKV0 1188 aa6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 HOXD8P13378 290 aaPredicted RBP6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 SCNN1AP37088 669 aa6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 NRLP54845 237 aa6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 PSAPL1Q6NUJ1 521 aa6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 FAM35AQ86V20 835 aa6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 JPH1Q9HDC5 661 aaPredicted RBP6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 FRRS1LQ9P0K9 344 aa6.81□□□□□ -1.32
RNU4-55P-201ENST00000410731 UBAP1LF5GYI3 381 aa6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 MMP20O60882 483 aa6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 CPB1P15086 417 aa6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 SOX18P35713 384 aa6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 PHLDB3Q6NSJ2 640 aa6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 NLRP13Q86W25 1043 aa6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 GTF3C2Q8WUA4 911 aaPredicted RBP6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 ARID3AQ99856 593 aa6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 SPOCK3Q9BQ16 436 aa6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 FNDC3AQ9Y2H6 1198 aaKnown RBP6.8□□□□□ -1.32
RNU4-55P-201ENST00000410731 CARNS1A5YM72 827 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 MSTNO14793 375 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 RGS9O75916 674 aaPredicted RBP6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 PROCP04070 461 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 PSAPP07602 524 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 MLLT1Q03111 559 aaPredicted RBP6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 PLAURQ03405 335 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 PRRT3Q5FWE3 981 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 PERM1Q5SV97 790 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 B4GALNT3Q6L9W6 998 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 GPR152Q8TDT2 470 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 NUDT8Q8WV74 236 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 LPIN3Q9BQK8 851 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 MTMR7Q9Y216 660 aa6.79□□□□□ -1.32
RNU4-55P-201ENST00000410731 AFF1P51825 1210 aaKnown RBP6.78□□□□□ -1.32
RNU4-55P-201ENST00000410731 TTC9Q92623 222 aa6.78□□□□□ -1.32
RNU4-55P-201ENST00000410731 NPR3P17342 541 aa6.77□□□□□ -1.33
RNU4-55P-201ENST00000410731 MPSTP25325 297 aa6.77□□□□□ -1.33
RNU4-55P-201ENST00000410731 CHRNA4P43681 627 aa6.77□□□□□ -1.33
RNU4-55P-201ENST00000410731 ELMSAN1Q6PJG2 1045 aa6.77□□□□□ -1.33
RNU4-55P-201ENST00000410731 CD163Q86VB7 1156 aa6.77□□□□□ -1.33
RNU4-55P-201ENST00000410731 ATCAYQ86WG3 371 aa6.77□□□□□ -1.33
RNU4-55P-201ENST00000410731 C1QTNF9BB2RNN3 333 aa6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 RPLP1P05386 114 aaKnown RBP6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 EIF2AK2P19525 551 aaKnown RBP6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 EIF1AXP47813 144 aaKnown RBP6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 TRIM28Q13263 835 aaKnown RBP6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 GRIK5Q16478 980 aa6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 NOM1Q5C9Z4 860 aaKnown RBP6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 PDE12Q6L8Q7 609 aaKnown RBP6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 ILDR2Q71H61 639 aa6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 OR13H1Q8NG92 308 aa6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 NUDT16Q96DE0 195 aaKnown RBP6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 NSUN5Q96P11 429 aaKnown RBP6.76□□□□□ -1.33
RNU4-55P-201ENST00000410731 LOC102724428A0A0B4J2F2 783 aa6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 FAM229AH3BQW9 127 aa6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 SIK1P57059 783 aa6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 SF3B2Q13435 895 aaKnown RBP6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 MTMR3Q13615 1198 aa6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 TRAPPC3LQ5T215 181 aa6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 ALKBH2Q6NS38 261 aa6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 HFE2Q6ZVN8 426 aa6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 RETREG2Q8NC44 543 aa6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 EDEM1Q92611 657 aa6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 SMG9Q9H0W8 520 aaKnown RBP6.75□□□□□ -1.33
RNU4-55P-201ENST00000410731 A0A0A0MRY4 1105 aa6.74□□□□□ -1.33
RNU4-55P-201ENST00000410731 FAM13AO94988 1023 aa6.74□□□□□ -1.33
RNU4-55P-201ENST00000410731 APBA3O96018 575 aa6.74□□□□□ -1.33
RNU4-55P-201ENST00000410731 GHRHP01286 108 aa6.74□□□□□ -1.33
RNU4-55P-201ENST00000410731 PDGFAP04085 211 aa6.74□□□□□ -1.33
RNU4-55P-201ENST00000410731 PCSK2P16519 638 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms