RNA–Protein interactions for RNA: ENST00000410092.7

SPIRE1-203, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-203ENST00000410092 TRAF1Q13077 416 aa28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 TPTE2Q6XPS3 522 aa28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 ZSCAN16Q9H4T2 348 aaPredicted RBP28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 TFIP11Q9UBB9 837 aaKnown RBP28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 HOXC9P31274 260 aa28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 STX8Q9UNK0 236 aa28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 A0A1W2PP64 1363 aa28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 UBA7P41226 1012 aa28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 TBC1D32Q96NH3 1257 aa28.18■■■□□ 2.1
SPIRE1-203ENST00000410092 SLC4A8Q2Y0W8 1093 aa28.17■■■□□ 2.1
SPIRE1-203ENST00000410092 STXBP4Q6ZWJ1 553 aa28.17■■■□□ 2.1
SPIRE1-203ENST00000410092 BRF1Q92994 677 aa28.17■■■□□ 2.1
SPIRE1-203ENST00000410092 LRRC27Q9C0I9 530 aa28.17■■■□□ 2.1
SPIRE1-203ENST00000410092 CKAP2LQ8IYA6 745 aa28.17■■■□□ 2.1
SPIRE1-203ENST00000410092 TESK2Q96S53 571 aa28.17■■■□□ 2.1
SPIRE1-203ENST00000410092 RTCBQ9Y3I0 505 aaKnown RBP28.17■■■□□ 2.1
SPIRE1-203ENST00000410092 ESPNB1AK53 854 aa28.17■■■□□ 2.1
SPIRE1-203ENST00000410092 ZBTB43O43298 467 aa28.16■■■□□ 2.1
SPIRE1-203ENST00000410092 PIK3C2GO75747 1445 aa28.16■■■□□ 2.1
SPIRE1-203ENST00000410092 PAXIP1Q6ZW49 1069 aaPredicted RBP28.16■■■□□ 2.1
SPIRE1-203ENST00000410092 NBPF7P0C2Y1 421 aaPredicted RBP28.16■■■□□ 2.1
SPIRE1-203ENST00000410092 RAB11FIP4Q86YS3 637 aa28.15■■■□□ 2.1
SPIRE1-203ENST00000410092 ARHGEF12Q9NZN5 1544 aa28.15■■■□□ 2.1
SPIRE1-203ENST00000410092 CETN1Q12798 172 aa28.15■■■□□ 2.1
SPIRE1-203ENST00000410092 STX1AQ16623 288 aa28.15■■■□□ 2.1
SPIRE1-203ENST00000410092 ESYT1Q9BSJ8 1104 aa28.15■■■□□ 2.1
SPIRE1-203ENST00000410092 IFIT1BQ5T764 474 aaKnown RBP28.15■■■□□ 2.1
SPIRE1-203ENST00000410092 MPHOSPH6Q99547 160 aaKnown RBP28.15■■■□□ 2.1
SPIRE1-203ENST00000410092 TSPYL1Q9H0U9 437 aa28.15■■■□□ 2.1
SPIRE1-203ENST00000410092 RBM8AQ9Y5S9 174 aaKnown RBP28.15■■■□□ 2.1
SPIRE1-203ENST00000410092 ANAPC15P60006 121 aa28.14■■■□□ 2.1
SPIRE1-203ENST00000410092 PCDHB15Q9Y5E8 787 aa28.14■■■□□ 2.1
SPIRE1-203ENST00000410092 GNAQP50148 359 aa28.14■■■□□ 2.1
SPIRE1-203ENST00000410092 SLC9C2Q5TAH2 1124 aa28.14■■■□□ 2.1
SPIRE1-203ENST00000410092 TTC41PQ6P2S7 1318 aa28.14■■■□□ 2.1
SPIRE1-203ENST00000410092 RNMTO43148 476 aaKnown RBP28.14■■■□□ 2.1
SPIRE1-203ENST00000410092 IQSEC3Q9UPP2 1182 aaPredicted RBP28.14■■■□□ 2.1
SPIRE1-203ENST00000410092 KIF5CO60282 957 aa28.14■■■□□ 2.09
SPIRE1-203ENST00000410092 IDEP14735 1019 aa28.14■■■□□ 2.09
SPIRE1-203ENST00000410092 CLIP2Q9UDT6 1046 aa28.14■■■□□ 2.09
SPIRE1-203ENST00000410092 HSPA2P54652 639 aa28.14■■■□□ 2.09
SPIRE1-203ENST00000410092 YEATS4O95619 227 aa28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 ZSCAN30Q86W11 494 aa28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 OGFOD1Q8N543 542 aa28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 CENPHQ9H3R5 247 aa28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 VAMP4O75379 141 aa28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 BMP15O95972 392 aa28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 MTIF2P46199 727 aaKnown RBP28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 PAG1Q9NWQ8 432 aa28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 ANKRD62A6NC57 917 aa28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 NUP88Q99567 741 aaPredicted RBP28.13■■■□□ 2.09
SPIRE1-203ENST00000410092 PTPN14Q15678 1187 aa28.12■■■□□ 2.09
SPIRE1-203ENST00000410092 CCDC102BQ68D86 513 aa28.12■■■□□ 2.09
SPIRE1-203ENST00000410092 RBM25P49756 843 aaKnown RBP28.12■■■□□ 2.09
SPIRE1-203ENST00000410092 IRS4O14654 1257 aaPredicted RBP28.12■■■□□ 2.09
SPIRE1-203ENST00000410092 FAM114A1Q8IWE2 563 aa28.12■■■□□ 2.09
SPIRE1-203ENST00000410092 UBXN4Q92575 508 aa28.12■■■□□ 2.09
SPIRE1-203ENST00000410092 CFAP43Q8NDM7 1665 aa28.11■■■□□ 2.09
SPIRE1-203ENST00000410092 RTN1Q16799 776 aa28.11■■■□□ 2.09
SPIRE1-203ENST00000410092 GNAT2P19087 354 aa28.11■■■□□ 2.09
SPIRE1-203ENST00000410092 TMX3Q96JJ7 454 aa28.11■■■□□ 2.09
SPIRE1-203ENST00000410092 MAP3K19Q56UN5 1328 aa28.11■■■□□ 2.09
SPIRE1-203ENST00000410092 CCDC66A2RUB6 948 aa28.11■■■□□ 2.09
SPIRE1-203ENST00000410092 EIF4G3O43432 1585 aaKnown RBP28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 USO1O60763 962 aaKnown RBP28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 UBE2HP62256 183 aa28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 ENOX2Q16206 610 aaKnown RBP28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 CCDC40Q4G0X9 1142 aa28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 GDPD2Q9HCC8 539 aa28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 PA2G4Q9UQ80 394 aaKnown RBP28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 MAGEB6P1A0A0J9YX57 407 aa28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 GBP2P32456 591 aaPredicted RBP28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 SAMM50Q9Y512 469 aa28.1■■■□□ 2.09
SPIRE1-203ENST00000410092 PRKCSHP14314 528 aaPredicted RBP28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 CDCA7Q9BWT1 371 aaPredicted RBP28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 CARD14Q9BXL6 1004 aa28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 UQCRHLA0A096LP55 91 aa28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 UQCRHP07919 91 aa28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 GBP3Q9H0R5 595 aa28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 F8W031 263 aaPredicted RBP28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 ERMNQ8TAM6 284 aa28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 PARP3Q9Y6F1 533 aa28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 ANKRD2Q9GZV1 360 aa28.09■■■□□ 2.09
SPIRE1-203ENST00000410092 TAX1BP1Q86VP1 789 aa28.08■■■□□ 2.09
SPIRE1-203ENST00000410092 TDRD12Q587J7 1177 aaKnown RBP28.08■■■□□ 2.09
SPIRE1-203ENST00000410092 ALG1Q9BT22 464 aa28.08■■■□□ 2.09
SPIRE1-203ENST00000410092 ATP10AO60312 1499 aa28.08■■■□□ 2.09
SPIRE1-203ENST00000410092 NEMFO60524 1076 aa28.08■■■□□ 2.09
SPIRE1-203ENST00000410092 ZSCAN22P10073 491 aaPredicted RBP28.08■■■□□ 2.09
SPIRE1-203ENST00000410092 RBM10P98175 930 aaKnown RBP28.08■■■□□ 2.09
SPIRE1-203ENST00000410092 BIN1O00499 593 aa28.08■■■□□ 2.08
SPIRE1-203ENST00000410092 CAVIN2O95810 425 aa28.08■■■□□ 2.08
SPIRE1-203ENST00000410092 LIG1P18858 919 aa28.08■■■□□ 2.08
SPIRE1-203ENST00000410092 PLCG2P16885 1265 aa28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 FAM193AP78312 1265 aa28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 CWF19L2Q2TBE0 894 aaKnown RBP28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 PANK2Q9BZ23 570 aa28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 TFCP2L1Q9NZI6 479 aa28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 LMTK3Q96Q04 1460 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms