RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 CCDC88AQ3V6T2 1871 aa21.77■■□□□ 1.08
PDE6D-202ENST00000409772 IARSP41252 1262 aaKnown RBP21.76■■□□□ 1.07
PDE6D-202ENST00000409772 OLFM4Q6UX06 510 aa21.76■■□□□ 1.07
PDE6D-202ENST00000409772 C16orf71Q8IYS4 520 aaPredicted RBP21.76■■□□□ 1.07
PDE6D-202ENST00000409772 ZNF277Q9NRM2 450 aaPredicted RBP21.76■■□□□ 1.07
PDE6D-202ENST00000409772 H7C1W4 665 aa21.75■■□□□ 1.07
PDE6D-202ENST00000409772 RPS8P62241 208 aaKnown RBP21.75■■□□□ 1.07
PDE6D-202ENST00000409772 GCKRQ14397 625 aa21.75■■□□□ 1.07
PDE6D-202ENST00000409772 CWF19L2Q2TBE0 894 aaKnown RBP21.75■■□□□ 1.07
PDE6D-202ENST00000409772 MPNDQ8N594 471 aa21.75■■□□□ 1.07
PDE6D-202ENST00000409772 ALDH1L2Q3SY69 923 aa21.74■■□□□ 1.07
PDE6D-202ENST00000409772 DPP8Q6V1X1 898 aaPredicted RBP21.74■■□□□ 1.07
PDE6D-202ENST00000409772 CDCA7LQ96GN5 454 aa21.74■■□□□ 1.07
PDE6D-202ENST00000409772 DICER1Q9UPY3 1922 aaKnown RBP21.74■■□□□ 1.07
PDE6D-202ENST00000409772 KIF3CO14782 793 aa21.73■■□□□ 1.07
PDE6D-202ENST00000409772 TOMM70O94826 608 aa21.73■■□□□ 1.07
PDE6D-202ENST00000409772 VEGFAP15692 232 aaPredicted RBP21.73■■□□□ 1.07
PDE6D-202ENST00000409772 RRAGCQ9HB90 399 aa21.73■■□□□ 1.07
PDE6D-202ENST00000409772 RTFDC1Q9BY42 306 aaPredicted RBP21.72■■□□□ 1.07
PDE6D-202ENST00000409772 NMRK2Q9NPI5 230 aa21.72■■□□□ 1.07
PDE6D-202ENST00000409772 PTPRCP08575 1304 aa21.72■■□□□ 1.07
PDE6D-202ENST00000409772 UBE3BQ7Z3V4 1068 aa21.71■■□□□ 1.07
PDE6D-202ENST00000409772 LARGE2Q8N3Y3 721 aa21.71■■□□□ 1.07
PDE6D-202ENST00000409772 JARID2Q92833 1246 aaPredicted RBP21.71■■□□□ 1.07
PDE6D-202ENST00000409772 DDX60Q8IY21 1712 aaKnown RBP21.71■■□□□ 1.07
PDE6D-202ENST00000409772 LAMB2P55268 1798 aa21.71■■□□□ 1.07
PDE6D-202ENST00000409772 F6X3S4 739 aa21.7■■□□□ 1.06
PDE6D-202ENST00000409772 ALDH1L1O75891 902 aa21.7■■□□□ 1.06
PDE6D-202ENST00000409772 CTSWP56202 376 aa21.7■■□□□ 1.06
PDE6D-202ENST00000409772 BEND3Q5T5X7 828 aa21.7■■□□□ 1.06
PDE6D-202ENST00000409772 MRPL50Q8N5N7 158 aaKnown RBP21.7■■□□□ 1.06
PDE6D-202ENST00000409772 CELF1Q92879 486 aaKnown RBP21.7■■□□□ 1.06
PDE6D-202ENST00000409772 CDC5LQ99459 802 aaKnown RBP21.7■■□□□ 1.06
PDE6D-202ENST00000409772 PLA2G12BQ9BX93 195 aa21.7■■□□□ 1.06
PDE6D-202ENST00000409772 EIF6P56537 245 aaKnown RBP21.69■■□□□ 1.06
PDE6D-202ENST00000409772 ANKRD18AQ8IVF6 992 aa21.69■■□□□ 1.06
PDE6D-202ENST00000409772 TTLL11Q8NHH1 800 aa21.69■■□□□ 1.06
PDE6D-202ENST00000409772 SSH1Q8WYL5 1049 aa21.69■■□□□ 1.06
PDE6D-202ENST00000409772 SRCIN1Q9C0H9 1055 aa21.69■■□□□ 1.06
PDE6D-202ENST00000409772 SNED1Q8TER0 1413 aa21.69■■□□□ 1.06
PDE6D-202ENST00000409772 FZD9O00144 591 aa21.68■■□□□ 1.06
PDE6D-202ENST00000409772 PPIP5K2O43314 1243 aa21.68■■□□□ 1.06
PDE6D-202ENST00000409772 SLC4A10Q6U841 1118 aa21.68■■□□□ 1.06
PDE6D-202ENST00000409772 C9orf78Q9NZ63 289 aaPredicted RBP21.68■■□□□ 1.06
PDE6D-202ENST00000409772 NSFL1CQ9UNZ2 370 aaKnown RBP21.68■■□□□ 1.06
PDE6D-202ENST00000409772 IQCA1LA6NCM1 817 aa21.67■■□□□ 1.06
PDE6D-202ENST00000409772 HNRNPUQ00839 825 aaKnown RBP eCLIP21.67■■□□□ 1.06
PDE6D-202ENST00000409772 NIM1KQ8IY84 436 aa21.67■■□□□ 1.06
PDE6D-202ENST00000409772 RBM46Q8TBY0 533 aaKnown RBP21.67■■□□□ 1.06
PDE6D-202ENST00000409772 DDNO94850 711 aaPredicted RBP21.66■■□□□ 1.06
PDE6D-202ENST00000409772 EYA3Q99504 573 aa21.66■■□□□ 1.06
PDE6D-202ENST00000409772 SEC31BQ9NQW1 1179 aa21.66■■□□□ 1.06
PDE6D-202ENST00000409772 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
PDE6D-202ENST00000409772 TIAM2Q8IVF5 1701 aa21.66■■□□□ 1.06
PDE6D-202ENST00000409772 RTL9Q8NET4 1388 aa21.65■■□□□ 1.06
PDE6D-202ENST00000409772 KIAA2012Q0VF49 1180 aa21.65■■□□□ 1.06
PDE6D-202ENST00000409772 GPC2Q8N158 579 aa21.65■■□□□ 1.06
PDE6D-202ENST00000409772 GRM8O00222 908 aa21.64■■□□□ 1.05
PDE6D-202ENST00000409772 CSF1RP07333 972 aa21.64■■□□□ 1.05
PDE6D-202ENST00000409772 BRPF1P55201 1214 aaPredicted RBP21.64■■□□□ 1.05
PDE6D-202ENST00000409772 CASP7P55210 303 aa21.64■■□□□ 1.05
PDE6D-202ENST00000409772 FSTL1Q12841 308 aa21.64■■□□□ 1.05
PDE6D-202ENST00000409772 WASHC4Q2M389 1173 aa21.64■■□□□ 1.05
PDE6D-202ENST00000409772 L3MBTL3Q96JM7 780 aaPredicted RBP21.64■■□□□ 1.05
PDE6D-202ENST00000409772 CCDC85AQ96PX6 553 aaPredicted RBP21.64■■□□□ 1.05
PDE6D-202ENST00000409772 BSDC1Q9NW68 430 aaPredicted RBP21.64■■□□□ 1.05
PDE6D-202ENST00000409772 PODXL2Q9NZ53 605 aa21.64■■□□□ 1.05
PDE6D-202ENST00000409772 ANKIB1Q9P2G1 1089 aa21.64■■□□□ 1.05
PDE6D-202ENST00000409772 C6orf229H3BNL8 230 aa21.63■■□□□ 1.05
PDE6D-202ENST00000409772 IGHMBP2P38935 993 aaKnown RBP21.63■■□□□ 1.05
PDE6D-202ENST00000409772 AOC3Q16853 763 aa21.63■■□□□ 1.05
PDE6D-202ENST00000409772 ZNRF3Q9ULT6 936 aa21.63■■□□□ 1.05
PDE6D-202ENST00000409772 GREM2Q9H772 168 aa21.62■■□□□ 1.05
PDE6D-202ENST00000409772 TAF1P21675 1872 aa21.61■■□□□ 1.05
PDE6D-202ENST00000409772 GPSM2P81274 684 aa21.61■■□□□ 1.05
PDE6D-202ENST00000409772 SMC1BQ8NDV3 1235 aa21.61■■□□□ 1.05
PDE6D-202ENST00000409772 MPHOSPH8Q99549 860 aa21.61■■□□□ 1.05
PDE6D-202ENST00000409772 ZC3H12CQ9C0D7 883 aaKnown RBP21.61■■□□□ 1.05
PDE6D-202ENST00000409772 WDR90Q96KV7 1748 aa21.6■■□□□ 1.05
PDE6D-202ENST00000409772 ANKRD18BA2A2Z9 1011 aa21.6■■□□□ 1.05
PDE6D-202ENST00000409772 ITGA6P23229 1130 aa21.6■■□□□ 1.05
PDE6D-202ENST00000409772 TNIP1Q15025 636 aa21.6■■□□□ 1.05
PDE6D-202ENST00000409772 BCL2L13Q9BXK5 485 aa21.6■■□□□ 1.05
PDE6D-202ENST00000409772 GGA1Q9UJY5 639 aa21.6■■□□□ 1.05
PDE6D-202ENST00000409772 XDHP47989 1333 aa21.59■■□□□ 1.05
PDE6D-202ENST00000409772 MYH3P11055 1940 aa21.59■■□□□ 1.05
PDE6D-202ENST00000409772 POTECB2RU33 542 aa21.59■■□□□ 1.05
PDE6D-202ENST00000409772 RARSP54136 660 aaKnown RBP21.59■■□□□ 1.05
PDE6D-202ENST00000409772 IFIT5Q13325 482 aaKnown RBP21.59■■□□□ 1.05
PDE6D-202ENST00000409772 TBC1D16Q8TBP0 767 aa21.59■■□□□ 1.05
PDE6D-202ENST00000409772 API5Q9BZZ5 524 aaKnown RBP21.59■■□□□ 1.05
PDE6D-202ENST00000409772 POLLQ9UGP5 575 aa21.59■■□□□ 1.05
PDE6D-202ENST00000409772 HACL1Q9UJ83 578 aa21.59■■□□□ 1.05
PDE6D-202ENST00000409772 GJA3Q9Y6H8 435 aa21.59■■□□□ 1.05
PDE6D-202ENST00000409772 ZNF541Q9H0D2 1346 aa21.58■■□□□ 1.05
PDE6D-202ENST00000409772 G3V3G9 751 aa21.58■■□□□ 1.05
PDE6D-202ENST00000409772 ATP2B4P23634 1241 aa21.58■■□□□ 1.05
PDE6D-202ENST00000409772 LMOD1P29536 600 aaPredicted RBP21.58■■□□□ 1.05
PDE6D-202ENST00000409772 DCAF8Q5TAQ9 597 aa21.58■■□□□ 1.05
PDE6D-202ENST00000409772 PNMA8AQ86V59 439 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms