RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 CPLX2Q6PUV4 134 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 BRAPQ7Z569 592 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 WAPLQ7Z5K2 1190 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 LUZP1Q86V48 1076 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 POTEDQ86YR6 584 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 TEX2Q8IWB9 1127 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 ANKRD24Q8TF21 1146 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 CACTINQ8WUQ7 758 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 MRPS27Q92552 414 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 RUBCNQ92622 972 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 MAP4K1Q92918 833 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 ZNF622Q969S3 477 aaKnown RBP eCLIP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 CEP89Q96ST8 783 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 SDF4Q9BRK5 362 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 LSG1Q9H089 658 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 VIPAS39Q9H9C1 493 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 GDPD2Q9HCC8 539 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 CABP1Q9NZU7 370 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 FEZ2Q9UHY8 353 aaPredicted RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 STAG3Q9UJ98 1225 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 RCOR1Q9UKL0 485 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 LRRFIP2Q9Y608 721 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 A2ML1A8K2U0 1454 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 PTPRMP28827 1452 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 ITSN1Q15811 1721 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 A0A087WUV0 522 aaPredicted RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC196A0A1B0GTZ2 297 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 ERICH4A6NGS2 130 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 TMCO5BA8MYB1 307 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 MYO1CO00159 1063 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 APBB1O00213 710 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 WASLO00401 505 aaPredicted RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SRGAP3O43295 1099 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SMARCA5O60264 1052 aaPredicted RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 KIF5CO60282 957 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CDKL5O76039 1030 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 URI1O94763 535 aaPredicted RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CLSTN1O94985 981 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 ZRANB2O95218 330 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 YEATS4O95619 227 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SERPINC1P01008 464 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SLC3A2P08195 630 aaKnown RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 HMOX1P09601 288 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 TOP1P11387 765 aaKnown RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 RPS6KB1P23443 525 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 TXLNAP40222 546 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CLCN6P51797 869 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 NLRP12P59046 1061 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SEMA3FQ13275 785 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 G3BP1Q13283 466 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 TAF7Q15545 349 aaPredicted RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 FILIP1LQ4L180 1135 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 DNAJC21Q5F1R6 531 aaKnown RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SWT1Q5T5J6 900 aaKnown RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 TTLL5Q6EMB2 1281 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 GGT6Q6P531 493 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SYNE3Q6ZMZ3 975 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 GBP6Q6ZN66 633 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 KRBA2Q6ZNG9 492 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 MICALCLQ6ZW33 695 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 NOL8Q76FK4 1167 aaKnown RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 NBPF11Q86T75 865 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SRLQ86TD4 932 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 TTC6Q86TZ1 520 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 NUTM1Q86Y26 1132 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC50Q8IVM0 306 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SUGP1Q8IWZ8 645 aaKnown RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CEP120Q8N960 986 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 TRIML1Q8N9V2 468 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC191Q8NCU4 936 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 EHBP1Q8NDI1 1231 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 FAM71BQ8TC56 605 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 PI4K2BQ8TCG2 481 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SMARCE1Q969G3 411 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC51Q96ER9 411 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 PPP1R13BQ96KQ4 1090 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 PHACTR3Q96KR7 559 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 NEK1Q96PY6 1258 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CTAGE1Q96RT6 745 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 NCAPGQ9BPX3 1015 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 PYM1Q9BRP8 204 aaKnown RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 TRIM34Q9BYJ4 488 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 DNAJC25Q9H1X3 360 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 RBM28Q9NW13 759 aaKnown RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 KIAA1468Q9P260 1216 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 ORC3Q9UBD5 711 aaPredicted RBP3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 PALD1Q9ULE6 856 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 EXOC6BQ9Y2D4 811 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 FHOD1Q9Y613 1164 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 SPATA31D1Q6ZQQ2 1576 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 NEO1Q92859 1461 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 CD163L1Q9NR16 1453 aa3.28□□□□□ -1.88
SNORD88.1-201ENST00000408684 POGZQ7Z3K3 1410 aa3.27□□□□□ -1.89
SNORD88.1-201ENST00000408684 MROH2AA6NES4 1674 aa3.27□□□□□ -1.89
SNORD88.1-201ENST00000408684 MAP3K15Q6ZN16 1313 aa3.27□□□□□ -1.89
SNORD88.1-201ENST00000408684 MINK1Q8N4C8 1332 aaPredicted RBP3.27□□□□□ -1.89
SNORD88.1-201ENST00000408684 ERCC6L2Q5T890 1561 aa3.27□□□□□ -1.89
SNORD88.1-201ENST00000408684 SHTN1A0MZ66 631 aa3.27□□□□□ -1.89
SNORD88.1-201ENST00000408684 NUTM2FA1L443 756 aa3.27□□□□□ -1.89
SNORD88.1-201ENST00000408684 GNAT3A8MTJ3 354 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms