RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 SFPQP23246 707 aaKnown RBP eCLIP14.92□□□□□ -0.02
HERC3-203ENST00000407637 CORO7P57737 925 aa14.92□□□□□ -0.02
HERC3-203ENST00000407637 MCTP2Q6DN12 878 aa14.92□□□□□ -0.02
HERC3-203ENST00000407637 SUGP1Q8IWZ8 645 aaKnown RBP14.92□□□□□ -0.02
HERC3-203ENST00000407637 CCDC150Q8NCX0 1101 aa14.92□□□□□ -0.02
HERC3-203ENST00000407637 ZSCAN31Q96LW9 406 aaPredicted RBP14.92□□□□□ -0.02
HERC3-203ENST00000407637 KIF20BQ96Q89 1820 aa14.92□□□□□ -0.02
HERC3-203ENST00000407637 PNMA6EA0A0J9YXQ4 647 aa14.92□□□□□ -0.02
HERC3-203ENST00000407637 VPS53Q5VIR6 699 aa14.92□□□□□ -0.02
HERC3-203ENST00000407637 IL1RAPL2Q9NP60 686 aa14.92□□□□□ -0.02
HERC3-203ENST00000407637 ZFYVE9O95405 1425 aa14.92□□□□□ -0.02
HERC3-203ENST00000407637 TTC41PQ6P2S7 1318 aa14.91□□□□□ -0.02
HERC3-203ENST00000407637 HECW2Q9P2P5 1572 aa14.91□□□□□ -0.02
HERC3-203ENST00000407637 TRIM65Q6PJ69 517 aa14.91□□□□□ -0.02
HERC3-203ENST00000407637 NUTM1Q86Y26 1132 aa14.91□□□□□ -0.02
HERC3-203ENST00000407637 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
HERC3-203ENST00000407637 ASXL2Q76L83 1435 aa14.91□□□□□ -0.02
HERC3-203ENST00000407637 LONRF2Q1L5Z9 754 aa14.91□□□□□ -0.02
HERC3-203ENST00000407637 GPR161Q8N6U8 529 aaKnown RBP14.91□□□□□ -0.02
HERC3-203ENST00000407637 PARD6BQ9BYG5 372 aa14.91□□□□□ -0.02
HERC3-203ENST00000407637 DONSONQ9NYP3 566 aa14.91□□□□□ -0.02
HERC3-203ENST00000407637 IMPACTQ9P2X3 320 aa14.91□□□□□ -0.02
HERC3-203ENST00000407637 CPSF1Q10570 1443 aaKnown RBP14.91□□□□□ -0.02
HERC3-203ENST00000407637 ADGRB3O60242 1522 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 ABCC1P33527 1531 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 ADCY9O60503 1353 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 TUBB4AP04350 444 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 GNAI2P04899 355 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 LARP1Q6PKG0 1096 aaKnown RBP14.9□□□□□ -0.02
HERC3-203ENST00000407637 CWC27Q6UX04 472 aaKnown RBP14.9□□□□□ -0.02
HERC3-203ENST00000407637 PDE11AQ9HCR9 933 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 TPCN1Q9ULQ1 816 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 PPP6R1Q9UPN7 881 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 GSCP56915 257 aaPredicted RBP14.9□□□□□ -0.02
HERC3-203ENST00000407637 MMS22LQ6ZRQ5 1243 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 PLEKHA4Q9H4M7 779 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 MAP2P11137 1827 aaKnown RBP14.9□□□□□ -0.02
HERC3-203ENST00000407637 ABCC3O15438 1527 aa14.9□□□□□ -0.02
HERC3-203ENST00000407637 ADGRL3Q9HAR2 1447 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 SWT1Q5T5J6 900 aaKnown RBP14.89□□□□□ -0.03
HERC3-203ENST00000407637 NBPF6Q5VWK0 638 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 ERCC4Q92889 916 aaPredicted RBP14.89□□□□□ -0.03
HERC3-203ENST00000407637 NBPF4Q96M43 638 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 CARD10Q9BWT7 1032 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 XPO4Q9C0E2 1151 aaKnown RBP14.89□□□□□ -0.03
HERC3-203ENST00000407637 SUFUQ9UMX1 484 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 CYP46A1Q9Y6A2 500 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 ZFYVE16Q7Z3T8 1539 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
HERC3-203ENST00000407637 RPS6KA5O75582 802 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 KCNJ6P48051 423 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
HERC3-203ENST00000407637 PRPF40BQ6NWY9 871 aaKnown RBP14.89□□□□□ -0.03
HERC3-203ENST00000407637 FAM177A1Q8N128 213 aaPredicted RBP14.89□□□□□ -0.03
HERC3-203ENST00000407637 PDCP20941 246 aa14.88□□□□□ -0.03
HERC3-203ENST00000407637 DNAJC21Q5F1R6 531 aaKnown RBP14.88□□□□□ -0.03
HERC3-203ENST00000407637 CEP57L1Q8IYX8 460 aa14.88□□□□□ -0.03
HERC3-203ENST00000407637 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
HERC3-203ENST00000407637 IFNKQ9P0W0 207 aa14.88□□□□□ -0.03
HERC3-203ENST00000407637 N4BP1O75113 896 aaKnown RBP14.87□□□□□ -0.03
HERC3-203ENST00000407637 CPP00450 1065 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 CEBPZQ03701 1054 aaKnown RBP14.87□□□□□ -0.03
HERC3-203ENST00000407637 PPP2R3AQ06190 1150 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 APOBRQ0VD83 1088 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 MCM6Q14566 821 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 ANO10Q9NW15 660 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 FAN1Q9Y2M0 1017 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 AOX1Q06278 1338 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 MAP2K7O14733 419 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 NRDCO43847 1150 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 MAP2K2P36507 400 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 PTH1RQ03431 593 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 COL9A3Q14050 684 aaPredicted RBP14.87□□□□□ -0.03
HERC3-203ENST00000407637 RSRC2Q7L4I2 434 aaKnown RBP14.87□□□□□ -0.03
HERC3-203ENST00000407637 G2E3Q7L622 706 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 AKAP2Q9Y2D5 859 aa14.87□□□□□ -0.03
HERC3-203ENST00000407637 KIF3BO15066 747 aa14.86□□□□□ -0.03
HERC3-203ENST00000407637 LRRC31Q6UY01 552 aa14.86□□□□□ -0.03
HERC3-203ENST00000407637 ANKRD20A12PQ8NF67 263 aa14.86□□□□□ -0.03
HERC3-203ENST00000407637 GOLPH3LQ9H4A5 285 aa14.86□□□□□ -0.03
HERC3-203ENST00000407637 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
HERC3-203ENST00000407637 TADA2BQ86TJ2 420 aa14.86□□□□□ -0.03
HERC3-203ENST00000407637 EFCAB13Q8IY85 973 aa14.86□□□□□ -0.03
HERC3-203ENST00000407637 PI4K2BQ8TCG2 481 aa14.86□□□□□ -0.03
HERC3-203ENST00000407637 MKRN1Q9UHC7 482 aaKnown RBP14.86□□□□□ -0.03
HERC3-203ENST00000407637 ZCCHC11Q5TAX3 1644 aaKnown RBP14.86□□□□□ -0.03
HERC3-203ENST00000407637 MICALL1Q8N3F8 863 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 FAM212AQ96EL1 285 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 CEP89Q96ST8 783 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 EFCAB6Q5THR3 1501 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 SRGAP3O43295 1099 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 CCP110O43303 1012 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 ATP6V1AP38606 617 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 CCT4P50991 539 aaKnown RBP14.85□□□□□ -0.03
HERC3-203ENST00000407637 TTLL5Q6EMB2 1281 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 CCAR1Q8IX12 1150 aaKnown RBP14.85□□□□□ -0.03
HERC3-203ENST00000407637 AFAP1Q8N556 730 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 RABGGTAQ92696 567 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 TCEANC2Q96MN5 208 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms