RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 HS1BP3Q53T59 392 aa6.52□□□□□ -1.37
VPS41-203ENST00000395969 HSP90AB3PQ58FF7 597 aa6.52□□□□□ -1.37
VPS41-203ENST00000395969 UTP14CQ5TAP6 766 aaKnown RBP6.52□□□□□ -1.37
VPS41-203ENST00000395969 PI4KAP2A4QPH2 592 aa6.52□□□□□ -1.37
VPS41-203ENST00000395969 PCCAP05165 728 aaPredicted RBP6.52□□□□□ -1.37
VPS41-203ENST00000395969 CYP19A1P11511 503 aaPredicted RBP6.52□□□□□ -1.37
VPS41-203ENST00000395969 SKOR2Q2VWA4 1001 aaPredicted RBP6.52□□□□□ -1.37
VPS41-203ENST00000395969 UNC5CLQ8IV45 518 aa6.52□□□□□ -1.37
VPS41-203ENST00000395969 PI4KAP1Q8N8J0 262 aa6.52□□□□□ -1.37
VPS41-203ENST00000395969 MAP3K2Q9Y2U5 619 aa6.52□□□□□ -1.37
VPS41-203ENST00000395969 MED23Q9ULK4 1368 aa6.52□□□□□ -1.37
VPS41-203ENST00000395969 LAMB1P07942 1786 aa6.52□□□□□ -1.37
VPS41-203ENST00000395969 PNMA6EA0A0J9YXQ4 647 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 ZNF500O60304 480 aaPredicted RBP6.51□□□□□ -1.37
VPS41-203ENST00000395969 PTMSP20962 102 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 XPCQ01831 940 aaPredicted RBP6.51□□□□□ -1.37
VPS41-203ENST00000395969 PROSER3Q2NL68 480 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 TBC1D9Q6ZT07 1266 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 ANKRD13DQ6ZTN6 518 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 DDX17Q92841 729 aaKnown RBP6.51□□□□□ -1.37
VPS41-203ENST00000395969 SMARCC1Q92922 1105 aaPredicted RBP6.51□□□□□ -1.37
VPS41-203ENST00000395969 USP26Q9BXU7 913 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 ZMYM6O95789 1325 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 MAP3K15Q6ZN16 1313 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 ZNF34Q8IZ26 560 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 CWC22Q9HCG8 908 aaKnown RBP6.51□□□□□ -1.37
VPS41-203ENST00000395969 MIS18AQ9NYP9 233 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 HIP1O00291 1037 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 USPL1Q5W0Q7 1092 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 CLEC4GQ6UXB4 293 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 RHPN1Q8TCX5 695 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 TM6SF1Q9BZW5 370 aa6.51□□□□□ -1.37
VPS41-203ENST00000395969 LRRFIP2Q9Y608 721 aaKnown RBP6.51□□□□□ -1.37
VPS41-203ENST00000395969 PSME4Q14997 1843 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 MX1P20591 662 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 MCM2P49736 904 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 NT5C2P49902 561 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 TCIRG1Q13488 830 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 RAB3GAP1Q15042 981 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 TAF7LQ5H9L4 462 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 TOM1L2Q6ZVM7 507 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 PIGBQ92521 554 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 C22orf23Q9BZE7 217 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 DYNC1I1O14576 645 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 NBPF7P0C2Y1 421 aaPredicted RBP6.5□□□□□ -1.37
VPS41-203ENST00000395969 EIF5P55010 431 aaKnown RBP6.5□□□□□ -1.37
VPS41-203ENST00000395969 DMTNQ08495 405 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 RABEP1Q15276 862 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 PPP1R42Q7Z4L9 355 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 TTC5Q8N0Z6 440 aa6.5□□□□□ -1.37
VPS41-203ENST00000395969 TNPO1Q92973 898 aaKnown RBP6.5□□□□□ -1.37
VPS41-203ENST00000395969 RPAP1Q9BWH6 1393 aaPredicted RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 GLRX3O76003 335 aaKnown RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 ATP5JP18859 108 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 SDSP20132 328 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 SLC10A5Q5PT55 438 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 GIGYF2Q6Y7W6 1299 aaKnown RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 CABLES1Q8TDN4 633 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 LTV1Q96GA3 475 aaPredicted RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 NOL7Q9UMY1 257 aaKnown RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 CHD4Q14839 1912 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 MYH13Q9UKX3 1938 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 F6X3S4 739 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 REC8O95072 547 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 NEXNQ0ZGT2 675 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 ANKRD45Q5TZF3 282 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 ZBTB38Q8NAP3 1195 aaPredicted RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 BTG4Q9NY30 223 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 MSNP26038 577 aaKnown RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 NASPP49321 788 aaPredicted RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 MFAP1P55081 439 aaKnown RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 CUL4AQ13619 759 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 CHRNA2Q15822 529 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 INTS5Q6P9B9 1019 aaKnown RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 C10orf71Q711Q0 1435 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 FAM177A1Q8N128 213 aaPredicted RBP6.49□□□□□ -1.37
VPS41-203ENST00000395969 SUCLG2Q96I99 432 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 PDLIM2Q96JY6 352 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 TMOD3Q9NYL9 352 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 USP16Q9Y5T5 823 aa6.49□□□□□ -1.37
VPS41-203ENST00000395969 SH3TC1Q8TE82 1336 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 NID2Q14112 1375 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 STARD3NLO95772 234 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 CYP2E1P05181 493 aaPredicted RBP6.48□□□□□ -1.37
VPS41-203ENST00000395969 CHMLP26374 656 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 PTPN12Q05209 780 aaKnown RBP6.48□□□□□ -1.37
VPS41-203ENST00000395969 HSCBQ8IWL3 235 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 XAGE3Q8WTP9 111 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 INTS4Q96HW7 963 aaKnown RBP6.48□□□□□ -1.37
VPS41-203ENST00000395969 GBP4Q96PP9 640 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 SLC4A9Q96Q91 983 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 ESYT1Q9BSJ8 1104 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 WDR19Q8NEZ3 1342 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 A0A087WZG4 1122 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 UQCRHLA0A096LP55 91 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 ERC2O15083 957 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 SASH1O94885 1247 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 UQCRHP07919 91 aa6.48□□□□□ -1.37
VPS41-203ENST00000395969 GTF2E1P29083 439 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms