RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 TSPYL2Q9H2G4 693 aaPredicted RBP7.41□□□□□ -1.22
A1CF-206ENST00000395489 HMGB3O15347 200 aaKnown RBP7.41□□□□□ -1.22
A1CF-206ENST00000395489 PPP2R5EQ16537 467 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 VPS36Q86VN1 386 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 SPDL1Q96EA4 605 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 MYOM3Q5VTT5 1437 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 LRRC9Q6ZRR7 1453 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 E2F6O75461 281 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 SWT1Q5T5J6 900 aaKnown RBP7.41□□□□□ -1.22
A1CF-206ENST00000395489 FGD6Q6ZV73 1430 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 PRC1O43663 620 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 SPAG1Q07617 926 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 CUL3Q13618 768 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 SLC4A8Q2Y0W8 1093 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 ACBD5Q5T8D3 534 aaPredicted RBP7.41□□□□□ -1.22
A1CF-206ENST00000395489 KANK3Q6NY19 840 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 TAF4BQ92750 862 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 ZNF653Q96CK0 615 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 CPLX1O14810 134 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 LMNAP02545 664 aaKnown RBP7.41□□□□□ -1.22
A1CF-206ENST00000395489 FOXD4L1Q9NU39 408 aa7.41□□□□□ -1.22
A1CF-206ENST00000395489 TFIP11Q9UBB9 837 aaKnown RBP7.41□□□□□ -1.22
A1CF-206ENST00000395489 CYP2C19P33261 490 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 SPA17Q15506 151 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 EXOC1Q9NV70 894 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 TRAK1Q9UPV9 953 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 NDC80O14777 642 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 YEATS4O95619 227 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 CAPRIN2Q6IMN6 1127 aaKnown RBP7.4□□□□□ -1.22
A1CF-206ENST00000395489 NOL8Q76FK4 1167 aaKnown RBP7.4□□□□□ -1.22
A1CF-206ENST00000395489 BHMTQ93088 406 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 RUNDC1Q96C34 613 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 SCOCQ9UIL1 159 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 CASQ2O14958 399 aaPredicted RBP7.4□□□□□ -1.22
A1CF-206ENST00000395489 C3orf20Q8ND61 904 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 CTNNBL1Q8WYA6 563 aaPredicted RBP7.4□□□□□ -1.22
A1CF-206ENST00000395489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.4□□□□□ -1.22
A1CF-206ENST00000395489 SAMD1Q6SPF0 538 aaPredicted RBP7.4□□□□□ -1.22
A1CF-206ENST00000395489 RAB11FIP4Q86YS3 637 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 COG6Q9Y2V7 657 aa7.4□□□□□ -1.22
A1CF-206ENST00000395489 KIF4AO95239 1232 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 NME8Q8N427 588 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 CCDC155Q8N6L0 562 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 ZNF483Q8TF39 744 aaPredicted RBP7.4□□□□□ -1.23
A1CF-206ENST00000395489 IFT81Q8WYA0 676 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 PLCB1Q9NQ66 1216 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 ENO4A6NNW6 628 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 PIP4K2CQ8TBX8 421 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 SCAF11Q99590 1463 aaKnown RBP7.4□□□□□ -1.23
A1CF-206ENST00000395489 TRIM14Q14142 442 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 CCDC96Q2M329 555 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 CPLX4Q7Z7G2 160 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 PPP1R14BQ96C90 147 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 MPHOSPH9Q99550 1183 aa7.4□□□□□ -1.23
A1CF-206ENST00000395489 HECW1Q76N89 1606 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 RAD54L2Q9Y4B4 1467 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 H0YC42 278 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 GSTA2P09210 222 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 SKIP12755 728 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 TPD52P55327 224 aaPredicted RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 C8orf34Q49A92 452 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 KLHL23Q8NBE8 558 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 MAP3K7CLP57077 242 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 RNASELQ05823 741 aaKnown RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 CFAP100Q494V2 611 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 GTF3C6Q969F1 213 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 CYP46A1Q9Y6A2 500 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 ATXN2Q99700 1313 aaKnown RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 GOLGA6BA6NDN3 693 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 LMNB1P20700 586 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 HNRNPMP52272 730 aaKnown RBP eCLIP7.39□□□□□ -1.23
A1CF-206ENST00000395489 CNTROBQ8N137 903 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 ENAHQ8N8S7 591 aaPredicted RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 HOOK2Q96ED9 719 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 CETN3O15182 167 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 ANO2Q9NQ90 1003 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 ZC4H2Q9NQZ6 224 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 TSKSQ9UJT2 592 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 TTF2Q9UNY4 1162 aaKnown RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 KDM5DQ9BY66 1539 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 ZNF513Q8N8E2 541 aaPredicted RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 TRIM58Q8NG06 486 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 EIF2AQ9BY44 585 aaKnown RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 RASAL2Q9UJF2 1139 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 IQSEC3Q9UPP2 1182 aaPredicted RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 PSDA5PKW4 1024 aaPredicted RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 KCNJ6P48051 423 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 PPP2R3AQ06190 1150 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 SRLQ86TD4 932 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 USP33Q8TEY7 942 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 NOP53Q9NZM5 478 aaKnown RBP7.39□□□□□ -1.23
A1CF-206ENST00000395489 ARHGAP6O43182 974 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 GNG11P61952 73 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 FBXO41Q8TF61 875 aa7.39□□□□□ -1.23
A1CF-206ENST00000395489 ABCD1P33897 745 aa7.38□□□□□ -1.23
A1CF-206ENST00000395489 ARMCX6Q7L4S7 300 aa7.38□□□□□ -1.23
A1CF-206ENST00000395489 CNGA4Q8IV77 575 aa7.38□□□□□ -1.23
A1CF-206ENST00000395489 C17orf50Q8WW18 174 aa7.38□□□□□ -1.23
A1CF-206ENST00000395489 PHAXQ9H814 394 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms