RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
UBE2D3-207ENST00000394801 TICAM2Q86XR7 235 aa18.39■□□□□ 0.53
UBE2D3-207ENST00000394801 VSIG10Q8N0Z9 540 aa18.39■□□□□ 0.53
UBE2D3-207ENST00000394801 ISCA1Q9BUE6 129 aa18.39■□□□□ 0.53
UBE2D3-207ENST00000394801 ALDH8A1Q9H2A2 487 aaPredicted RBP18.39■□□□□ 0.53
UBE2D3-207ENST00000394801 TAF5LO75529 589 aa18.38■□□□□ 0.53
UBE2D3-207ENST00000394801 KCNJ4P48050 445 aa18.38■□□□□ 0.53
UBE2D3-207ENST00000394801 TEX13AQ9BXU3 409 aaPredicted RBP18.38■□□□□ 0.53
UBE2D3-207ENST00000394801 TMOD3Q9NYL9 352 aa18.38■□□□□ 0.53
UBE2D3-207ENST00000394801 HMG20BQ9P0W2 317 aa18.38■□□□□ 0.53
UBE2D3-207ENST00000394801 TRIM28Q13263 835 aaKnown RBP18.38■□□□□ 0.53
UBE2D3-207ENST00000394801 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
UBE2D3-207ENST00000394801 EDC3Q96F86 508 aaKnown RBP18.38■□□□□ 0.53
UBE2D3-207ENST00000394801 ZBTB3Q9H5J0 574 aa18.38■□□□□ 0.53
UBE2D3-207ENST00000394801 IL15P40933 162 aaPredicted RBP18.37■□□□□ 0.53
UBE2D3-207ENST00000394801 LARGE1O95461 756 aa18.37■□□□□ 0.53
UBE2D3-207ENST00000394801 LARP6Q9BRS8 491 aaKnown RBP18.37■□□□□ 0.53
UBE2D3-207ENST00000394801 SMC3Q9UQE7 1217 aa18.37■□□□□ 0.53
UBE2D3-207ENST00000394801 ZSCAN22P10073 491 aaPredicted RBP18.36■□□□□ 0.53
UBE2D3-207ENST00000394801 SYT1P21579 422 aa18.36■□□□□ 0.53
UBE2D3-207ENST00000394801 STX6O43752 255 aa18.35■□□□□ 0.53
UBE2D3-207ENST00000394801 CIAO1O76071 339 aa18.35■□□□□ 0.53
UBE2D3-207ENST00000394801 TCIRG1Q13488 830 aa18.35■□□□□ 0.53
UBE2D3-207ENST00000394801 CERKQ8TCT0 537 aa18.35■□□□□ 0.53
UBE2D3-207ENST00000394801 RRAGDQ9NQL2 400 aaPredicted RBP18.35■□□□□ 0.53
UBE2D3-207ENST00000394801 TMEM63CQ9P1W3 806 aa18.35■□□□□ 0.53
UBE2D3-207ENST00000394801 NSFL1CQ9UNZ2 370 aaKnown RBP18.35■□□□□ 0.53
UBE2D3-207ENST00000394801 EYA2O00167 538 aa18.35■□□□□ 0.53
UBE2D3-207ENST00000394801 TMEM87AQ8NBN3 555 aa18.35■□□□□ 0.53
UBE2D3-207ENST00000394801 ME3Q16798 604 aa18.34■□□□□ 0.53
UBE2D3-207ENST00000394801 KBTBD3Q8NAB2 608 aa18.34■□□□□ 0.53
UBE2D3-207ENST00000394801 PIGBQ92521 554 aa18.34■□□□□ 0.53
UBE2D3-207ENST00000394801 CHMP3Q9Y3E7 222 aa18.34■□□□□ 0.53
UBE2D3-207ENST00000394801 ANKRD1Q15327 319 aa18.34■□□□□ 0.53
UBE2D3-207ENST00000394801 NASPP49321 788 aaPredicted RBP18.33■□□□□ 0.53
UBE2D3-207ENST00000394801 ST3GAL1Q11201 340 aa18.33■□□□□ 0.53
UBE2D3-207ENST00000394801 BLOC1S2Q6QNY1 142 aa18.33■□□□□ 0.53
UBE2D3-207ENST00000394801 CCDC83Q8IWF9 413 aa18.33■□□□□ 0.53
UBE2D3-207ENST00000394801 BTG4Q9NY30 223 aa18.33■□□□□ 0.53
UBE2D3-207ENST00000394801 RBM27Q9P2N5 1060 aaKnown RBP18.33■□□□□ 0.53
UBE2D3-207ENST00000394801 FBXO3Q9UK99 471 aa18.33■□□□□ 0.53
UBE2D3-207ENST00000394801 ZNF609O15014 1411 aa18.33■□□□□ 0.52
UBE2D3-207ENST00000394801 PDIA4P13667 645 aaKnown RBP18.33■□□□□ 0.52
UBE2D3-207ENST00000394801 RPS6KB1P23443 525 aa18.33■□□□□ 0.52
UBE2D3-207ENST00000394801 MCMDC2Q4G0Z9 681 aa18.33■□□□□ 0.52
UBE2D3-207ENST00000394801 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.52
UBE2D3-207ENST00000394801 TPCN1Q9ULQ1 816 aa18.33■□□□□ 0.52
UBE2D3-207ENST00000394801 DISP2A7MBM2 1401 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 GJB2P29033 226 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 KRT32Q14532 448 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 PPP1R9BQ96SB3 815 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 PLA2G12BQ9BX93 195 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 SH3TC1Q8TE82 1336 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 LRSAM1Q6UWE0 723 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 USP48Q86UV5 1035 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 ATP6V1DQ9Y5K8 247 aa18.32■□□□□ 0.52
UBE2D3-207ENST00000394801 STARD3NLO95772 234 aa18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 F13A1P00488 732 aa18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 PRIM1P49642 420 aaKnown RBP18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 TIMM10P62072 90 aa18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 DNAJC10Q8IXB1 793 aa18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 TAF6LQ9Y6J9 622 aa18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 NDUFB9Q9Y6M9 179 aa18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 U3KPZ7 1027 aaPredicted RBP18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 PCCAP05165 728 aaPredicted RBP18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 NEUROD6Q96NK8 337 aa18.31■□□□□ 0.52
UBE2D3-207ENST00000394801 TCHHQ07283 1943 aa18.3■□□□□ 0.52
UBE2D3-207ENST00000394801 CCDC173Q0VFZ6 552 aa18.3■□□□□ 0.52
UBE2D3-207ENST00000394801 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
UBE2D3-207ENST00000394801 MTMR6Q9Y217 621 aa18.3■□□□□ 0.52
UBE2D3-207ENST00000394801 ZNF594Q96JF6 807 aaPredicted RBP18.3■□□□□ 0.52
UBE2D3-207ENST00000394801 PAG1Q9NWQ8 432 aa18.3■□□□□ 0.52
UBE2D3-207ENST00000394801 ITGB4P16144 1822 aa18.29■□□□□ 0.52
UBE2D3-207ENST00000394801 CSF1RP07333 972 aa18.29■□□□□ 0.52
UBE2D3-207ENST00000394801 TOB2Q14106 344 aaPredicted RBP18.29■□□□□ 0.52
UBE2D3-207ENST00000394801 KIF6Q6ZMV9 814 aa18.29■□□□□ 0.52
UBE2D3-207ENST00000394801 SEC62Q99442 399 aaKnown RBP18.29■□□□□ 0.52
UBE2D3-207ENST00000394801 RBSNQ9H1K0 784 aa18.29■□□□□ 0.52
UBE2D3-207ENST00000394801 HELLSQ9NRZ9 838 aa18.29■□□□□ 0.52
UBE2D3-207ENST00000394801 COL14A1Q05707 1796 aaKnown RBP18.29■□□□□ 0.52
UBE2D3-207ENST00000394801 A0A1B0GUL7 405 aa18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 GADD45BO75293 160 aaPredicted RBP18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 SYAP1Q96A49 352 aaPredicted RBP18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 BCL9O00512 1426 aa18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 LRP6O75581 1613 aa18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 SPEF2Q9C093 1822 aa18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 CHGBP05060 677 aa18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 CCDC57Q2TAC2 916 aa18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 GIGYF2Q6Y7W6 1299 aaKnown RBP18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 NECAB1Q8N987 351 aa18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 ZBTB38Q8NAP3 1195 aaPredicted RBP18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 PUS3Q9BZE2 481 aaKnown RBP18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 GDPD2Q9HCC8 539 aa18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
UBE2D3-207ENST00000394801 SYCE3A1L190 88 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms