RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 COL1A1P02452 1464 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 DDX60LQ5H9U9 1706 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 ATP2B3Q16720 1220 aa9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 H7C1W4 665 aa9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 FANCGO15287 622 aa9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 LINS1Q8NG48 757 aa9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 NAP1L5Q96NT1 182 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 NEK4P51957 841 aa9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 ZKSCAN5Q9Y2L8 839 aa9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 DDX49Q9Y6V7 483 aaKnown RBP9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 LY75O60449 1722 aa9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 TAF5LO75529 589 aa9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 SURF6O75683 361 aaKnown RBP9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 GNAI3P08754 354 aa9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 UBTFL1P0CB47 393 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 TCEANC2Q96MN5 208 aa9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 PUS3Q9BZE2 481 aaKnown RBP9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 MTMR6Q9Y217 621 aa9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 FAM173BQ6P4H8 233 aa9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 RTF1Q92541 710 aaKnown RBP9.4□□□□□ -0.9
GAPVD1-207ENST00000394105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.4□□□□□ -0.99e-7■■□□□ 13.5
GAPVD1-207ENST00000394105 ANAPC15P60006 121 aa9.4□□□□□ -0.91
GAPVD1-207ENST00000394105 AGXT2Q9BYV1 514 aa9.4□□□□□ -0.91
GAPVD1-207ENST00000394105 COPRSQ9NQ92 184 aa9.4□□□□□ -0.91
GAPVD1-207ENST00000394105 A1BGP04217 495 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 NAA30Q147X3 362 aaPredicted RBP9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 CCDC129Q6ZRS4 1044 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 METTL22Q9BUU2 404 aaPredicted RBP9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 ISY1Q9ULR0 285 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 BCL9O00512 1426 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 CCDC173Q0VFZ6 552 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 LRRC24Q50LG9 513 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 LARP1Q6PKG0 1096 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 MYH2Q9UKX2 1941 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 MKI67P46013 3256 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 SYT1P21579 422 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 CWC27Q6UX04 472 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 VSIG10Q8N0Z9 540 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 RNF214Q8ND24 703 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 INTS4Q96HW7 963 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 CCDC8Q9H0W5 538 aaPredicted RBP9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 WDR17Q8IZU2 1322 aa9.39□□□□□ -0.91
GAPVD1-207ENST00000394105 HCLS1P14317 486 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 NMIQ13287 307 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 PTF1AQ7RTS3 328 aa9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 GPHNQ9NQX3 736 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 PYCARDQ9ULZ3 195 aa9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 UPF2Q9HAU5 1272 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 CYP21A2P08686 494 aa9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 AMOTQ4VCS5 1084 aa9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 ALDH1L1O75891 902 aa9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 UBN2Q6ZU65 1347 aa9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 PTCD1O75127 700 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 TTC12Q9H892 705 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 CNPY2Q9Y2B0 182 aa9.38□□□□□ -0.91
GAPVD1-207ENST00000394105 TTC41PQ6P2S7 1318 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 CCDC171Q6TFL3 1326 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 UBE2Q2LH0YL09 131 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 TRHP20396 242 aaPredicted RBP9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 PI16Q6UXB8 463 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 KIF1BPQ96EK5 621 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 DBNDD2Q9BQY9 259 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 MYL6BP14649 208 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 SLC27A2O14975 620 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 TFCP2Q12800 502 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 HLFQ16534 295 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 ZNF384Q8TF68 577 aa9.37□□□□□ -0.91
GAPVD1-207ENST00000394105 FDPSP14324 419 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 SPTLC3Q9NUV7 552 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 MYH6P13533 1939 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 EVX2Q03828 476 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 HSP90AA2PQ14568 343 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 NECAB1Q8N987 351 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 RILPL2Q969X0 211 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 PKNOX2Q96KN3 472 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 CDC37L1Q7L3B6 337 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 PGBD1Q96JS3 809 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 ASAP1Q9ULH1 1129 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 FOCADQ5VW36 1801 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 GTF2F1P35269 517 aaKnown RBP eCLIP9.36□□□□□ -0.915e-6■■■■□ 24.4
GAPVD1-207ENST00000394105 ISCA1Q9BUE6 129 aa9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 FTOQ9C0B1 505 aaKnown RBP eCLIP9.36□□□□□ -0.91
GAPVD1-207ENST00000394105 LAMB1P07942 1786 aa9.35□□□□□ -0.91
GAPVD1-207ENST00000394105 BTAF1O14981 1849 aa9.35□□□□□ -0.91
GAPVD1-207ENST00000394105 NHSQ6T4R5 1651 aa9.35□□□□□ -0.91
GAPVD1-207ENST00000394105 A0A087WWV3 80 aa9.35□□□□□ -0.91
GAPVD1-207ENST00000394105 EXOSC10Q01780 885 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-207ENST00000394105 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
GAPVD1-207ENST00000394105 R3HCC1Q9Y3T6 440 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-207ENST00000394105 THSD7AQ9UPZ6 1657 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms