RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 UQCRHLA0A096LP55 91 aa16.45■□□□□ 0.22
CCDC142-202ENST00000393965 UQCRHP07919 91 aa16.45■□□□□ 0.22
CCDC142-202ENST00000393965 NECTIN1Q15223 517 aa16.45■□□□□ 0.22
CCDC142-202ENST00000393965 USP25Q9UHP3 1055 aa16.45■□□□□ 0.22
CCDC142-202ENST00000393965 VPS37CA5D8V6 355 aaPredicted RBP16.45■□□□□ 0.22
CCDC142-202ENST00000393965 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
CCDC142-202ENST00000393965 TNNI3KQ59H18 835 aa16.44■□□□□ 0.22
CCDC142-202ENST00000393965 CREB3L3Q68CJ9 461 aa16.44■□□□□ 0.22
CCDC142-202ENST00000393965 FBXW7Q969H0 707 aa16.44■□□□□ 0.22
CCDC142-202ENST00000393965 FPGT-TNNI3KV9GXZ4 949 aa16.44■□□□□ 0.22
CCDC142-202ENST00000393965 MCM2P49736 904 aa16.44■□□□□ 0.22
CCDC142-202ENST00000393965 FOXO4P98177 505 aa16.44■□□□□ 0.22
CCDC142-202ENST00000393965 LAMB4A4D0S4 1761 aa16.44■□□□□ 0.22
CCDC142-202ENST00000393965 DDX46Q7L014 1031 aaKnown RBP16.44■□□□□ 0.22
CCDC142-202ENST00000393965 GPATCH3Q96I76 525 aa16.44■□□□□ 0.22
CCDC142-202ENST00000393965 TOGARAM1Q9Y4F4 1720 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 EVA1CP58658 441 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 TIMM10P62072 90 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 LRRC24Q50LG9 513 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 SYNE4Q8N205 404 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 INTS4Q96HW7 963 aaKnown RBP16.43■□□□□ 0.22
CCDC142-202ENST00000393965 TTC12Q9H892 705 aaPredicted RBP16.43■□□□□ 0.22
CCDC142-202ENST00000393965 KCPQ6ZWJ8 1503 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 TJP1Q07157 1748 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 ME3Q16798 604 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 PLBD2Q8NHP8 589 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
CCDC142-202ENST00000393965 CNPY2Q9Y2B0 182 aa16.43■□□□□ 0.22
CCDC142-202ENST00000393965 SLC27A2O14975 620 aa16.42■□□□□ 0.22
CCDC142-202ENST00000393965 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
CCDC142-202ENST00000393965 PUS3Q9BZE2 481 aaKnown RBP16.42■□□□□ 0.22
CCDC142-202ENST00000393965 COPRSQ9NQ92 184 aa16.42■□□□□ 0.22
CCDC142-202ENST00000393965 TPCN1Q9ULQ1 816 aa16.42■□□□□ 0.22
CCDC142-202ENST00000393965 NUP188Q5SRE5 1749 aa16.42■□□□□ 0.22
CCDC142-202ENST00000393965 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
CCDC142-202ENST00000393965 FAM173BQ6P4H8 233 aa16.42■□□□□ 0.22
CCDC142-202ENST00000393965 LIMCH1Q9UPQ0 1083 aa16.42■□□□□ 0.22
CCDC142-202ENST00000393965 ABCA3Q99758 1704 aa16.42■□□□□ 0.22
CCDC142-202ENST00000393965 SOS2Q07890 1332 aaPredicted RBP16.41■□□□□ 0.22
CCDC142-202ENST00000393965 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
CCDC142-202ENST00000393965 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
CCDC142-202ENST00000393965 SYT1P21579 422 aa16.41■□□□□ 0.22
CCDC142-202ENST00000393965 USP48Q86UV5 1035 aa16.41■□□□□ 0.22
CCDC142-202ENST00000393965 MAP4K1Q92918 833 aa16.41■□□□□ 0.22
CCDC142-202ENST00000393965 ASAP1Q9ULH1 1129 aa16.41■□□□□ 0.22
CCDC142-202ENST00000393965 UBR2Q8IWV8 1755 aa16.41■□□□□ 0.22
CCDC142-202ENST00000393965 PARP4Q9UKK3 1724 aaKnown RBP16.41■□□□□ 0.22
CCDC142-202ENST00000393965 HCLS1P14317 486 aaPredicted RBP16.41■□□□□ 0.22
CCDC142-202ENST00000393965 IL2RBP14784 551 aa16.4■□□□□ 0.22
CCDC142-202ENST00000393965 STK3Q13188 491 aa16.4■□□□□ 0.22
CCDC142-202ENST00000393965 CAMK4Q16566 473 aa16.4■□□□□ 0.22
CCDC142-202ENST00000393965 ATG9AQ7Z3C6 839 aa16.4■□□□□ 0.22
CCDC142-202ENST00000393965 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
CCDC142-202ENST00000393965 ZSWIM6Q9HCJ5 1215 aa16.4■□□□□ 0.22
CCDC142-202ENST00000393965 NEUROD6Q96NK8 337 aa16.4■□□□□ 0.22
CCDC142-202ENST00000393965 ZNF609O15014 1411 aa16.4■□□□□ 0.22
CCDC142-202ENST00000393965 GJB2P29033 226 aa16.39■□□□□ 0.22
CCDC142-202ENST00000393965 ZNF445P59923 1031 aa16.39■□□□□ 0.21
CCDC142-202ENST00000393965 MED23Q9ULK4 1368 aa16.39■□□□□ 0.21
CCDC142-202ENST00000393965 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
CCDC142-202ENST00000393965 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
CCDC142-202ENST00000393965 A0A0U1RQG5 324 aaPredicted RBP16.38■□□□□ 0.21
CCDC142-202ENST00000393965 H7C1W4 665 aa16.38■□□□□ 0.21
CCDC142-202ENST00000393965 RRP9O43818 475 aaKnown RBP16.38■□□□□ 0.21
CCDC142-202ENST00000393965 PTMSP20962 102 aa16.38■□□□□ 0.21
CCDC142-202ENST00000393965 VPS53Q5VIR6 699 aa16.38■□□□□ 0.21
CCDC142-202ENST00000393965 KCNB2Q92953 911 aa16.38■□□□□ 0.21
CCDC142-202ENST00000393965 CYP46A1Q9Y6A2 500 aa16.38■□□□□ 0.21
CCDC142-202ENST00000393965 ABCC6O95255 1503 aa16.37■□□□□ 0.21
CCDC142-202ENST00000393965 TAF5LO75529 589 aa16.37■□□□□ 0.21
CCDC142-202ENST00000393965 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
CCDC142-202ENST00000393965 TSPY26PQ9H489 355 aa16.37■□□□□ 0.21
CCDC142-202ENST00000393965 HDAC5Q9UQL6 1122 aa16.37■□□□□ 0.21
CCDC142-202ENST00000393965 STX6O43752 255 aa16.37■□□□□ 0.21
CCDC142-202ENST00000393965 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.37■□□□□ 0.21
CCDC142-202ENST00000393965 DNAJC10Q8IXB1 793 aa16.37■□□□□ 0.21
CCDC142-202ENST00000393965 SMC3Q9UQE7 1217 aa16.37■□□□□ 0.21
CCDC142-202ENST00000393965 EPB41L2O43491 1005 aaKnown RBP16.36■□□□□ 0.21
CCDC142-202ENST00000393965 IGSF3O75054 1194 aa16.36■□□□□ 0.21
CCDC142-202ENST00000393965 ATP5JP18859 108 aa16.36■□□□□ 0.21
CCDC142-202ENST00000393965 TOB2Q14106 344 aaPredicted RBP16.36■□□□□ 0.21
CCDC142-202ENST00000393965 PIGBQ92521 554 aa16.36■□□□□ 0.21
CCDC142-202ENST00000393965 FAM89AQ96GI7 184 aa16.36■□□□□ 0.21
CCDC142-202ENST00000393965 CWC25Q9NXE8 425 aaPredicted RBP16.36■□□□□ 0.21
CCDC142-202ENST00000393965 PAPPAQ13219 1627 aa16.36■□□□□ 0.21
CCDC142-202ENST00000393965 GOLIM4O00461 696 aa16.36■□□□□ 0.21
CCDC142-202ENST00000393965 ZSCAN22P10073 491 aaPredicted RBP16.36■□□□□ 0.21
CCDC142-202ENST00000393965 DRC7Q8IY82 874 aa16.35■□□□□ 0.21
CCDC142-202ENST00000393965 CARD10Q9BWT7 1032 aa16.35■□□□□ 0.21
CCDC142-202ENST00000393965 BTG4Q9NY30 223 aa16.35■□□□□ 0.21
CCDC142-202ENST00000393965 DNM1Q05193 864 aaKnown RBP16.35■□□□□ 0.21
CCDC142-202ENST00000393965 HSP90AB3PQ58FF7 597 aa16.35■□□□□ 0.21
CCDC142-202ENST00000393965 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.35■□□□□ 0.21
CCDC142-202ENST00000393965 WDR33Q9C0J8 1336 aaKnown RBP16.35■□□□□ 0.21
CCDC142-202ENST00000393965 ERVV-2B6SEH9 535 aa16.35■□□□□ 0.21
CCDC142-202ENST00000393965 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
CCDC142-202ENST00000393965 LRSAM1Q6UWE0 723 aa16.34■□□□□ 0.21
CCDC142-202ENST00000393965 SLC4A9Q96Q91 983 aa16.34■□□□□ 0.21
CCDC142-202ENST00000393965 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms