RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 SPATA31A7Q8IWB4 1347 aa22.99■■□□□ 1.27
ERCC2-203ENST00000391944 IL6STP40189 918 aaPredicted RBP22.99■■□□□ 1.27
ERCC2-203ENST00000391944 NLRP10Q86W26 655 aa22.99■■□□□ 1.27
ERCC2-203ENST00000391944 ZDHHC9Q9Y397 364 aa22.99■■□□□ 1.27
ERCC2-203ENST00000391944 TIMM10P62072 90 aa22.98■■□□□ 1.27
ERCC2-203ENST00000391944 NEUROD6Q96NK8 337 aa22.98■■□□□ 1.27
ERCC2-203ENST00000391944 CDHR2Q9BYE9 1310 aa22.98■■□□□ 1.27
ERCC2-203ENST00000391944 TOM1O60784 492 aa22.98■■□□□ 1.27
ERCC2-203ENST00000391944 ZKSCAN1P17029 563 aaPredicted RBP22.98■■□□□ 1.27
ERCC2-203ENST00000391944 NUTM2BA6NNL0 878 aaPredicted RBP22.97■■□□□ 1.27
ERCC2-203ENST00000391944 NUTM2EB1AL46 878 aaPredicted RBP22.97■■□□□ 1.27
ERCC2-203ENST00000391944 CASTP20810 708 aaKnown RBP22.97■■□□□ 1.27
ERCC2-203ENST00000391944 CREB3L3Q68CJ9 461 aa22.97■■□□□ 1.27
ERCC2-203ENST00000391944 NUTM2AQ8IVF1 878 aaPredicted RBP22.97■■□□□ 1.27
ERCC2-203ENST00000391944 PUS3Q9BZE2 481 aaKnown RBP22.97■■□□□ 1.27
ERCC2-203ENST00000391944 ZSWIM6Q9HCJ5 1215 aa22.97■■□□□ 1.27
ERCC2-203ENST00000391944 NWD2Q9ULI1 1742 aa22.97■■□□□ 1.27
ERCC2-203ENST00000391944 ERVV-1B6SEH8 477 aa22.97■■□□□ 1.27
ERCC2-203ENST00000391944 AK2P54819 239 aa22.97■■□□□ 1.27
ERCC2-203ENST00000391944 DNAJC2Q99543 621 aaKnown RBP22.97■■□□□ 1.27
ERCC2-203ENST00000391944 JCADQ9P266 1359 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 ANKRD36CQ5JPF3 1778 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 KCNJ4P48050 445 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 MARCH10Q8NA82 808 aaPredicted RBP22.96■■□□□ 1.27
ERCC2-203ENST00000391944 ZNF609O15014 1411 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 GPTP24298 496 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 ADCK5Q3MIX3 580 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 BARGINQ6ZT62 677 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 TICAM2Q86XR7 235 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 JAKMIP1Q96N16 626 aaKnown RBP22.96■■□□□ 1.27
ERCC2-203ENST00000391944 GZF1Q9H116 711 aaPredicted RBP22.96■■□□□ 1.27
ERCC2-203ENST00000391944 CEP126Q9P2H0 1117 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 LIMCH1Q9UPQ0 1083 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 NDUFB9Q9Y6M9 179 aa22.96■■□□□ 1.27
ERCC2-203ENST00000391944 SLIT2O94813 1529 aa22.95■■□□□ 1.26
ERCC2-203ENST00000391944 PIP4K2BP78356 416 aa22.95■■□□□ 1.26
ERCC2-203ENST00000391944 VPS53Q5VIR6 699 aa22.95■■□□□ 1.26
ERCC2-203ENST00000391944 ZNF589Q86UQ0 364 aaPredicted RBP22.95■■□□□ 1.26
ERCC2-203ENST00000391944 NUP98P52948 1817 aa22.95■■□□□ 1.26
ERCC2-203ENST00000391944 A0A1B0GUL7 405 aa22.94■■□□□ 1.26
ERCC2-203ENST00000391944 KBTBD3Q8NAB2 608 aa22.94■■□□□ 1.26
ERCC2-203ENST00000391944 SLC27A2O14975 620 aa22.94■■□□□ 1.26
ERCC2-203ENST00000391944 TAF5LO75529 589 aa22.94■■□□□ 1.26
ERCC2-203ENST00000391944 IFIT5Q13325 482 aaKnown RBP22.94■■□□□ 1.26
ERCC2-203ENST00000391944 RUFY3Q7L099 469 aa22.94■■□□□ 1.26
ERCC2-203ENST00000391944 DZIP3Q86Y13 1208 aaKnown RBP22.94■■□□□ 1.26
ERCC2-203ENST00000391944 CYP46A1Q9Y6A2 500 aa22.94■■□□□ 1.26
ERCC2-203ENST00000391944 RNF20Q5VTR2 975 aa22.93■■□□□ 1.26
ERCC2-203ENST00000391944 SYNE4Q8N205 404 aa22.93■■□□□ 1.26
ERCC2-203ENST00000391944 CPA1P15085 419 aa22.93■■□□□ 1.26
ERCC2-203ENST00000391944 DDX46Q7L014 1031 aaKnown RBP22.93■■□□□ 1.26
ERCC2-203ENST00000391944 PDRG1Q9NUG6 133 aa22.92■■□□□ 1.26
ERCC2-203ENST00000391944 TBC1D2BQ9UPU7 963 aa22.92■■□□□ 1.26
ERCC2-203ENST00000391944 AKAP2Q9Y2D5 859 aa22.92■■□□□ 1.26
ERCC2-203ENST00000391944 CCDC9Q9Y3X0 531 aaKnown RBP22.92■■□□□ 1.26
ERCC2-203ENST00000391944 PALLDQ8WX93 1383 aa22.92■■□□□ 1.26
ERCC2-203ENST00000391944 BRD1O95696 1058 aa22.92■■□□□ 1.26
ERCC2-203ENST00000391944 EIF5P55010 431 aaKnown RBP22.92■■□□□ 1.26
ERCC2-203ENST00000391944 USPL1Q5W0Q7 1092 aa22.92■■□□□ 1.26
ERCC2-203ENST00000391944 MCTP1Q6DN14 999 aa22.92■■□□□ 1.26
ERCC2-203ENST00000391944 ACSBG1Q96GR2 724 aa22.92■■□□□ 1.26
ERCC2-203ENST00000391944 PAG1Q9NWQ8 432 aa22.92■■□□□ 1.26
ERCC2-203ENST00000391944 RPAP1Q9BWH6 1393 aaPredicted RBP22.91■■□□□ 1.26
ERCC2-203ENST00000391944 TSGA10IPQ3SY00 556 aa22.91■■□□□ 1.26
ERCC2-203ENST00000391944 TTLL11Q8NHH1 800 aa22.91■■□□□ 1.26
ERCC2-203ENST00000391944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.91■■□□□ 1.26
ERCC2-203ENST00000391944 PSMA5P28066 241 aa22.91■■□□□ 1.26
ERCC2-203ENST00000391944 MCMDC2Q4G0Z9 681 aa22.91■■□□□ 1.26
ERCC2-203ENST00000391944 TAF7LQ5H9L4 462 aa22.91■■□□□ 1.26
ERCC2-203ENST00000391944 INTS5Q6P9B9 1019 aaKnown RBP22.91■■□□□ 1.26
ERCC2-203ENST00000391944 CCDC85AQ96PX6 553 aaPredicted RBP22.91■■□□□ 1.26
ERCC2-203ENST00000391944 HMG20BQ9P0W2 317 aa22.91■■□□□ 1.26
ERCC2-203ENST00000391944 ZNF34Q8IZ26 560 aa22.9■■□□□ 1.26
ERCC2-203ENST00000391944 TRMT112Q9UI30 125 aaKnown RBP22.9■■□□□ 1.26
ERCC2-203ENST00000391944 FSD2A1L4K1 749 aa22.9■■□□□ 1.26
ERCC2-203ENST00000391944 GOLIM4O00461 696 aa22.9■■□□□ 1.26
ERCC2-203ENST00000391944 IFIT1P09914 478 aaKnown RBP22.9■■□□□ 1.26
ERCC2-203ENST00000391944 CCDC87Q9NVE4 849 aa22.9■■□□□ 1.26
ERCC2-203ENST00000391944 LOC102724428A0A0B4J2F2 783 aa22.89■■□□□ 1.25
ERCC2-203ENST00000391944 IRS4O14654 1257 aaPredicted RBP22.89■■□□□ 1.25
ERCC2-203ENST00000391944 ATP6V1AP38606 617 aa22.89■■□□□ 1.25
ERCC2-203ENST00000391944 CTSWP56202 376 aa22.89■■□□□ 1.25
ERCC2-203ENST00000391944 SIK1P57059 783 aa22.89■■□□□ 1.25
ERCC2-203ENST00000391944 L1TD1Q5T7N2 865 aaKnown RBP22.89■■□□□ 1.25
ERCC2-203ENST00000391944 ZSCAN31Q96LW9 406 aaPredicted RBP22.89■■□□□ 1.25
ERCC2-203ENST00000391944 MYH3P11055 1940 aa22.89■■□□□ 1.25
ERCC2-203ENST00000391944 SH3TC1Q8TE82 1336 aa22.89■■□□□ 1.25
ERCC2-203ENST00000391944 SPEF2Q9C093 1822 aa22.88■■□□□ 1.25
ERCC2-203ENST00000391944 A0A0G2JS52 829 aa22.88■■□□□ 1.25
ERCC2-203ENST00000391944 GREM2Q9H772 168 aa22.88■■□□□ 1.25
ERCC2-203ENST00000391944 LMBRD1Q9NUN5 540 aa22.88■■□□□ 1.25
ERCC2-203ENST00000391944 RIPOR2Q9Y4F9 1068 aa22.88■■□□□ 1.25
ERCC2-203ENST00000391944 CHGBP05060 677 aa22.87■■□□□ 1.25
ERCC2-203ENST00000391944 ITGA6P23229 1130 aa22.87■■□□□ 1.25
ERCC2-203ENST00000391944 CRKLP46109 303 aaKnown RBP22.87■■□□□ 1.25
ERCC2-203ENST00000391944 KLHL40Q2TBA0 621 aa22.87■■□□□ 1.25
ERCC2-203ENST00000391944 SEC62Q99442 399 aaKnown RBP22.87■■□□□ 1.25
ERCC2-203ENST00000391944 LARP6Q9BRS8 491 aaKnown RBP22.87■■□□□ 1.25
ERCC2-203ENST00000391944 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.87■■□□□ 1.25
ERCC2-203ENST00000391944 UBN2Q6ZU65 1347 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms