RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 TM6SF1Q9BZW5 370 aa21.33■■□□□ 1.01
ERCC2-201ENST00000391941 NAP1L2Q9ULW6 460 aaPredicted RBP21.33■■□□□ 1.01
ERCC2-201ENST00000391941 HSP90B1P14625 803 aaKnown RBP21.33■■□□□ 1
ERCC2-201ENST00000391941 C11orf57Q6ZUT1 292 aaPredicted RBP21.33■■□□□ 1
ERCC2-201ENST00000391941 BRF1Q92994 677 aa21.32■■□□□ 1
ERCC2-201ENST00000391941 UBR1Q8IWV7 1749 aa21.32■■□□□ 1
ERCC2-201ENST00000391941 ZNF75DP51815 510 aa21.32■■□□□ 1
ERCC2-201ENST00000391941 CLIP2Q9UDT6 1046 aa21.32■■□□□ 1
ERCC2-201ENST00000391941 GOLGA6L6A8MZA4 724 aa21.31■■□□□ 1
ERCC2-201ENST00000391941 EPHA10Q5JZY3 1008 aa21.31■■□□□ 1
ERCC2-201ENST00000391941 FILIP1Q7Z7B0 1213 aa21.31■■□□□ 1
ERCC2-201ENST00000391941 KCNB2Q92953 911 aa21.31■■□□□ 1
ERCC2-201ENST00000391941 A0A0U1RQG5 324 aaPredicted RBP21.31■■□□□ 1
ERCC2-201ENST00000391941 SLC39A6Q13433 755 aa21.31■■□□□ 1
ERCC2-201ENST00000391941 TPD52L1Q16890 204 aaPredicted RBP21.31■■□□□ 1
ERCC2-201ENST00000391941 COL15A1P39059 1388 aa21.31■■□□□ 1
ERCC2-201ENST00000391941 RPS6KB1P23443 525 aa21.3■■□□□ 1
ERCC2-201ENST00000391941 CHST3Q7LGC8 479 aa21.3■■□□□ 1
ERCC2-201ENST00000391941 DNAJC2Q99543 621 aaKnown RBP21.3■■□□□ 1
ERCC2-201ENST00000391941 CEMIPQ8WUJ3 1361 aa21.3■■□□□ 1
ERCC2-201ENST00000391941 LMOD2Q6P5Q4 547 aa21.3■■□□□ 1
ERCC2-201ENST00000391941 G3BP1Q13283 466 aaKnown RBP eCLIP21.3■■□□□ 1
ERCC2-201ENST00000391941 GPATCH3Q96I76 525 aa21.3■■□□□ 1
ERCC2-201ENST00000391941 ANKRD7Q92527 254 aa21.29■■□□□ 1
ERCC2-201ENST00000391941 KCNA6P17658 529 aa21.29■■□□□ 1
ERCC2-201ENST00000391941 MTX1Q13505 466 aa21.29■■□□□ 1
ERCC2-201ENST00000391941 CRYBG1Q9Y4K1 1723 aa21.28■■□□□ 1
ERCC2-201ENST00000391941 CCT2P78371 535 aaKnown RBP21.28■■□□□ 1
ERCC2-201ENST00000391941 NCOA5Q9HCD5 579 aaKnown RBP21.28■■□□□ 1
ERCC2-201ENST00000391941 NPHP4O75161 1426 aaPredicted RBP21.28■■□□□ 1
ERCC2-201ENST00000391941 Q6ZUG5 572 aa21.27■■□□□ 1
ERCC2-201ENST00000391941 CLSTN2Q9H4D0 955 aa21.27■■□□□ 1
ERCC2-201ENST00000391941 H3BQV1 296 aa21.27■■□□□ 1
ERCC2-201ENST00000391941 IFFO2Q5TF58 517 aa21.27■■□□□ 1
ERCC2-201ENST00000391941 DDX46Q7L014 1031 aaKnown RBP21.27■■□□□ 1
ERCC2-201ENST00000391941 PLA2G4DQ86XP0 818 aa21.26■□□□□ 0.99
ERCC2-201ENST00000391941 GOLPH3LQ9H4A5 285 aa21.26■□□□□ 0.99
ERCC2-201ENST00000391941 DBF4Q9UBU7 674 aaPredicted RBP21.26■□□□□ 0.99
ERCC2-201ENST00000391941 TPM3P06753 285 aa21.26■□□□□ 0.99
ERCC2-201ENST00000391941 DIP2AQ14689 1571 aa21.26■□□□□ 0.99
ERCC2-201ENST00000391941 EID1Q9Y6B2 187 aa21.26■□□□□ 0.99
ERCC2-201ENST00000391941 GRM8O00222 908 aa21.26■□□□□ 0.99
ERCC2-201ENST00000391941 CTIFO43310 598 aaKnown RBP21.26■□□□□ 0.99
ERCC2-201ENST00000391941 FGD1P98174 961 aa21.26■□□□□ 0.99
ERCC2-201ENST00000391941 HOXB7P09629 217 aa21.25■□□□□ 0.99
ERCC2-201ENST00000391941 RAB11FIP4Q86YS3 637 aa21.25■□□□□ 0.99
ERCC2-201ENST00000391941 GIGYF1O75420 1035 aaPredicted RBP21.25■□□□□ 0.99
ERCC2-201ENST00000391941 KSR2Q6VAB6 950 aa21.25■□□□□ 0.99
ERCC2-201ENST00000391941 TAF5LO75529 589 aa21.24■□□□□ 0.99
ERCC2-201ENST00000391941 PTPN21Q16825 1174 aa21.24■□□□□ 0.99
ERCC2-201ENST00000391941 SCAND2PQ9GZW5 306 aaPredicted RBP21.24■□□□□ 0.99
ERCC2-201ENST00000391941 NPHP3Q7Z494 1330 aa21.24■□□□□ 0.99
ERCC2-201ENST00000391941 IGKV5-2P06315 115 aa21.24■□□□□ 0.99
ERCC2-201ENST00000391941 PSMA5P28066 241 aa21.24■□□□□ 0.99
ERCC2-201ENST00000391941 ERC1Q8IUD2 1116 aa21.24■□□□□ 0.99
ERCC2-201ENST00000391941 ELP1O95163 1332 aa21.23■□□□□ 0.99
ERCC2-201ENST00000391941 SCRN1Q12765 414 aa21.23■□□□□ 0.99
ERCC2-201ENST00000391941 OTUD7BQ6GQQ9 843 aa21.23■□□□□ 0.99
ERCC2-201ENST00000391941 ST7Q9NRC1 585 aa21.23■□□□□ 0.99
ERCC2-201ENST00000391941 PDCP20941 246 aa21.23■□□□□ 0.99
ERCC2-201ENST00000391941 RESTQ13127 1097 aa21.23■□□□□ 0.99
ERCC2-201ENST00000391941 CYP21A2P08686 494 aa21.22■□□□□ 0.99
ERCC2-201ENST00000391941 APOBRQ0VD83 1088 aa21.22■□□□□ 0.99
ERCC2-201ENST00000391941 STOX1Q6ZVD7 989 aa21.22■□□□□ 0.99
ERCC2-201ENST00000391941 RIC3Q7Z5B4 369 aa21.22■□□□□ 0.99
ERCC2-201ENST00000391941 CCDC112Q8NEF3 446 aa21.22■□□□□ 0.99
ERCC2-201ENST00000391941 DBNLQ9UJU6 430 aaKnown RBP21.22■□□□□ 0.99
ERCC2-201ENST00000391941 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
ERCC2-201ENST00000391941 ZNF215Q9UL58 517 aaPredicted RBP21.22■□□□□ 0.99
ERCC2-201ENST00000391941 ATP5J2-PTCD1G3V325 749 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 PTCD1O75127 700 aaKnown RBP21.21■□□□□ 0.99
ERCC2-201ENST00000391941 TFCP2Q12800 502 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 ISM2Q6H9L7 571 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 CCAR1Q8IX12 1150 aaKnown RBP21.21■□□□□ 0.99
ERCC2-201ENST00000391941 TDRD7Q8NHU6 1098 aaKnown RBP21.21■□□□□ 0.99
ERCC2-201ENST00000391941 GTF3C6Q969F1 213 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 FMNL2Q96PY5 1086 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 GPHNQ9NQX3 736 aaPredicted RBP21.21■□□□□ 0.99
ERCC2-201ENST00000391941 GJB4Q9NTQ9 266 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 ALDH1L1O75891 902 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 RNF20Q5VTR2 975 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 NEK1Q96PY6 1258 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 MYD88Q99836 296 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 DDX19AQ9NUU7 478 aaKnown RBP21.21■□□□□ 0.99
ERCC2-201ENST00000391941 PXDNQ92626 1479 aa21.21■□□□□ 0.99
ERCC2-201ENST00000391941 GOLGA6L19H0YKK7 550 aa21.2■□□□□ 0.98
ERCC2-201ENST00000391941 CEP135Q66GS9 1140 aa21.2■□□□□ 0.98
ERCC2-201ENST00000391941 LRRN4CLQ8ND94 238 aa21.2■□□□□ 0.98
ERCC2-201ENST00000391941 USP28Q96RU2 1077 aa21.2■□□□□ 0.98
ERCC2-201ENST00000391941 TBX22Q9Y458 520 aa21.2■□□□□ 0.98
ERCC2-201ENST00000391941 DBNDD2Q9BQY9 259 aa21.2■□□□□ 0.98
ERCC2-201ENST00000391941 RNMTO43148 476 aaKnown RBP21.19■□□□□ 0.98
ERCC2-201ENST00000391941 SKILP12757 684 aa21.19■□□□□ 0.98
ERCC2-201ENST00000391941 IQCB1Q15051 598 aa21.19■□□□□ 0.98
ERCC2-201ENST00000391941 LRRC8AQ8IWT6 810 aa21.19■□□□□ 0.98
ERCC2-201ENST00000391941 CTNNA3Q9UI47 895 aa21.19■□□□□ 0.98
ERCC2-201ENST00000391941 HIP1O00291 1037 aa21.19■□□□□ 0.98
ERCC2-201ENST00000391941 ZNF771Q7L3S4 317 aaPredicted RBP21.19■□□□□ 0.98
ERCC2-201ENST00000391941 BIN1O00499 593 aa21.19■□□□□ 0.98
ERCC2-201ENST00000391941 ANKRD1Q15327 319 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms