RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 HIF1AQ16665 826 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 C4orf48Q5BLP8 95 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 CT47A1Q5JQC4 288 aaPredicted RBP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 FAM26DQ5JW98 314 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 DIEXFQ68CQ4 756 aaKnown RBP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 CCSAPQ6IQ19 270 aaPredicted RBP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 NXPE4Q6UWF7 544 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 PI16Q6UXB8 463 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 TSHZ1Q6ZSZ6 1077 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 ZNF438Q7Z4V0 828 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 KIAA0907Q7Z7F0 614 aaPredicted RBP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 STAG1Q8WVM7 1258 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 RELTQ969Z4 430 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 C8orf48Q96LL4 319 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 RPS6KC1Q96S38 1066 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 CRBNQ96SW2 442 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 DNAJC7Q99615 494 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 RSRP1Q9BUV0 290 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 SRRTQ9BXP5 876 aaKnown RBP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 CCDC113Q9H0I3 377 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 SCUBE2Q9NQ36 999 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 CABP1Q9NZU7 370 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 KLK14Q9P0G3 267 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 AXIN2Q9Y2T1 843 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 HCN4Q9Y3Q4 1203 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 SUPT16HQ9Y5B9 1047 aaKnown RBP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 SOWAHBA6NEL2 793 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 A6NHS1 94 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 BHMG1C9JSJ3 638 aaPredicted RBP3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 KIF3BO15066 747 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 SMAD7O15105 426 aaKnown RBP3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 PDPK1O15530 556 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 TRIM37O94972 964 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 CENPBP07199 599 aaPredicted RBP3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 NOS2P35228 1153 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 IRS1P35568 1242 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 SOX9P48436 509 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 HIRAP54198 1017 aaPredicted RBP3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 WNT7BP56706 349 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 ARID5BQ14865 1188 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 BRD3Q15059 726 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 TCEA2Q15560 299 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 MTERF2Q49AM1 385 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 TMEM74Q96NL1 305 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 BCO2Q9BYV7 579 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 PHACTR1Q9C0D0 580 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 SLC6A16Q9GZN6 736 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 GGNBP2Q9H3C7 697 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 NPHS2Q9NP85 383 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 RAB6BQ9NRW1 208 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 TMEM260Q9NX78 707 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 ACTR10Q9NZ32 417 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 FOXD3Q9UJU5 478 aaPredicted RBP3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 MAP4K5Q9Y4K4 846 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 COMMD10Q9Y6G5 202 aa3.31□□□□□ -1.88
RNU6-220P-201ENST00000390919 EML1O00423 815 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 TLL1O43897 1013 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 CAND2O75155 1236 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 TNFRSF21O75509 655 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 KRT18P05783 430 aaKnown RBP3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 LMNB1P20700 586 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 VARSP26640 1264 aaKnown RBP3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 BCAMP50895 628 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 EXOSC10Q01780 885 aaKnown RBP3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 APOBRQ0VD83 1088 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 RASGRF1Q13972 1273 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 PPP2R5AQ15172 486 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 TEAD4Q15561 434 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 SNAP47Q5SQN1 464 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 USPL1Q5W0Q7 1092 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 FBXW10Q5XX13 1052 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 PCNX4Q63HM2 1172 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 SPTY2D1Q68D10 685 aaPredicted RBP3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 PPP4R4Q6NUP7 873 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 NBPF10Q6P3W6 841 aaKnown RBP3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 KRT26Q7Z3Y9 468 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 SYNPOQ8N3V7 929 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 LILRB2Q8N423 598 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 ZNF296Q8WUU4 475 aaPredicted RBP3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 NKD1Q969G9 470 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 L3MBTL2Q969R5 705 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 EAF1Q96JC9 268 aaPredicted RBP3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 IER2Q9BTL4 223 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 NT5C1AQ9BXI3 368 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 ARHGEF10LQ9HCE6 1279 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 ST7Q9NRC1 585 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 TMPRSS4Q9NRS4 437 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 ADAMTS1Q9UHI8 967 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 MCM8Q9UJA3 840 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 TRAK1Q9UPV9 953 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 PLAAQ9Y263 795 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 EID1Q9Y6B2 187 aa3.3□□□□□ -1.88
RNU6-220P-201ENST00000390919 ALG1L2C9J202 215 aa3.29□□□□□ -1.88
RNU6-220P-201ENST00000390919 F6X3S4 739 aa3.29□□□□□ -1.88
RNU6-220P-201ENST00000390919 TK2O00142 265 aa3.29□□□□□ -1.88
RNU6-220P-201ENST00000390919 ASMTLO95671 621 aa3.29□□□□□ -1.88
RNU6-220P-201ENST00000390919 FSHRP23945 695 aa3.29□□□□□ -1.88
RNU6-220P-201ENST00000390919 EIF6P56537 245 aaKnown RBP3.29□□□□□ -1.88
RNU6-220P-201ENST00000390919 SH3BP2P78314 561 aa3.29□□□□□ -1.88
RNU6-220P-201ENST00000390919 IRX6P78412 446 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms