RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 PRNPP04156 253 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 INHAP05111 366 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 CFPP27918 469 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 KCNQ4P56696 695 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 USP4Q13107 963 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 NFATC2IPQ8NCF5 419 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 PPP1R12CQ9BZL4 782 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 EFCC1Q9HA90 598 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 DNAJB12Q9NXW2 375 aaKnown RBP3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 PIM2Q9P1W9 311 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 TFIP11Q9UBB9 837 aaKnown RBP3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 KCNH4Q9UQ05 1017 aa3.29□□□□□ -1.88
RNU6-440P-201ENST00000390882 SKIP12755 728 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 UVSSAQ2YD98 709 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 MAP7D1Q3KQU3 841 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 TSGA10IPQ3SY00 556 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 VSIG10LQ86VR7 867 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 CILP2Q8IUL8 1156 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 CLEC10AQ8IUN9 316 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 CCDC82Q8N4S0 544 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 AGBL5Q8NDL9 886 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 DCAF11Q8TEB1 546 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 CEP41Q9BYV8 373 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 BRD7Q9NPI1 651 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 FRRS1LQ9P0K9 344 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 NAGPAQ9UK23 515 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 CHIC2Q9UKJ5 165 aa3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 GPC6Q9Y625 555 aaPredicted RBP3.28□□□□□ -1.88
RNU6-440P-201ENST00000390882 CARMIL2Q6F5E8 1435 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 PALM3A6NDB9 673 aaPredicted RBP3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 WDR64B1ANS9 1081 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 PIK3CDO00329 1044 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 ATP9BO43861 1147 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 LMOD1P29536 600 aaPredicted RBP3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 TXLNAP40222 546 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 GDF10P55107 478 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 PCSK7Q16549 785 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 MSMPQ1L6U9 139 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 NFXL1Q6ZNB6 911 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 LCNL1Q6ZST4 164 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 AGGF1Q8N302 714 aaeCLIP3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 PLPP7Q8NBV4 271 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 TTC9Q92623 222 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 UTP4Q969X6 686 aaKnown RBP3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 SIRT1Q96EB6 747 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 FAM84AQ96KN4 292 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 UCN2Q96RP3 112 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 ARID3AQ99856 593 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 LMCD1Q9NZU5 365 aa3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 IQSEC3Q9UPP2 1182 aaPredicted RBP3.27□□□□□ -1.89
RNU6-440P-201ENST00000390882 ACIN1Q9UKV3 1341 aaKnown RBP3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 EML1O00423 815 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 ZSCAN22P10073 491 aaPredicted RBP3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 RFX1P22670 979 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 SCNN1DP51172 638 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 FAM35AQ86V20 835 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 PLEKHM2Q8IWE5 1019 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 GIMAP7Q8NHV1 300 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 CCDC85AQ96PX6 553 aaPredicted RBP3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 FAM83CQ9BQN1 747 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 VRTNQ9H8Y1 702 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 DOLKQ9UPQ8 538 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 LEMD3Q9Y2U8 911 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 PARP3Q9Y6F1 533 aa3.26□□□□□ -1.89
RNU6-440P-201ENST00000390882 A6NJY4 79 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 USP17L5A8MUK1 530 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 PPP1R15AO75807 674 aaPredicted RBP3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 RAP1GAPP47736 663 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 CTSWP56202 376 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 MTFR1Q15390 333 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 EML3Q32P44 896 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 OXLD1Q5BKU9 147 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 CFAP70Q5T0N1 1121 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 C1QL4Q86Z23 238 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 C7orf43Q8WVR3 580 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 TMEM40Q8WWA1 233 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 CEP63Q96MT8 703 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 LPIN3Q9BQK8 851 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 SRA1Q9HD15 236 aaKnown RBP3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 ATG3Q9NT62 314 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 MKRN1Q9UHC7 482 aaKnown RBP3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 NOD1Q9Y239 953 aa3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 MAFBQ9Y5Q3 323 aaPredicted RBP3.25□□□□□ -1.89
RNU6-440P-201ENST00000390882 USP17L3A6NCW0 530 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 USP17L4A6NCW7 530 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 CPB1P15086 417 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 FOSL1P15407 271 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 SRPK2P78362 688 aaKnown RBP3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 MESP2Q0VG99 397 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 NCOA4Q13772 614 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 ECM1Q16610 540 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 KANK4Q5T7N3 995 aaPredicted RBP3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 ELMSAN1Q6PJG2 1045 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 USP17L2Q6R6M4 530 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 USP17L1Q7RTZ2 530 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 TRIM50Q86XT4 487 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 MAP4K3Q8IVH8 894 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 LRRC56Q8IYG6 542 aaPredicted RBP3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 DEPDC4Q8N2C3 294 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms